BAC Information

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BAC

Clone NameB6Ng01-077L22
Chromosome10 (Build37)
Map Location 118,775,260 - 118,862,491
singlet/doubletdoublet
Overlap genenone
Upstream geneEG668205, EG668209, EG668213, LOC668216, Ifng, LOC100043478, LOC100042850, Dyrk2, LOC668223, LOC100042861, LOC674417, Cand1
Downstream geneGrip1, Helb, Irak3, Tmbim4, 1190005P17Rik, Hmga2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-077L22.bB6Ng01-077L22.g
ACCDH893638DH893639
length1,1541,186
definitionDH893638|Mus musculus domesticus DNA, BAC clone: B6Ng01-077L22, 5' end.DH893639|Mus musculus domesticus DNA, BAC clone: B6Ng01-077L22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(118,861,310 - 118,862,491)(118,775,260 - 118,776,480)
sequence
gaattctggtcttctgaagagcagcaagggctgtcatttcaatactgtta
agaatcttagtgtaaatttctgtattttccaatggtcttagggaacccct
gtgaaaaggtcattaaacaactccaaagtggtcgaggcccccaggttaag
aactactgaactgagccatctcatatgtgtgctttaaaaaatatatactt
tatttatatgagtacactgtcactgacacactagaagagggcatcagatc
ccattagagatggttgtgagctaccatgtagttgctgggaattgaactca
ggacctctggaagagcagtcagtgctcttaaccactgagccatctctcca
gccctatttgtgcttatttttaaagcatcacttcaccaatgtttatcagg
agacatatccagcatcaactttagctttaaacttcttatctggttaattt
caactaattaaaaaaataacattaataacgatataggatttaggcaatta
aaataaatattcagctcaggaaccccttatatacctcttccaagacaatg
ttcaatcaacagtcaaggctgttaatgttgttcatttcaaactaagttac
tgaagttatttctgctatttgcagaaatcaatttacaaatactgtgtgtt
accaaaacactattacagatccttctctgacactaatctttttaaagcca
ctctctggtacagaaaacttttcccagggcccatctaaactattttagat
ttaataaacaccttttattttgattagacagaatttgttctaccgttatt
taaatagtgatttaaaaacctatgcatcatatttttccactatttagatg
accctaaaacattcatgtgaataaagaaaattatctgttatctggtcaaa
acacctaataaataccatctagaatattagcagtttcccacctcttacct
agtgcttgatgcctgtcacaaatcaaaagccagctgaaagcatcatgcta
gtttgctgagtctgggcatgtcccagatgaaatgattgttcttggagctg
tgggggagtggatatctgaaatcgctctttttaagcgtagagctaggact
ctgaaacagtaaatgtcactgcgaaataagcttagtctgacggaccttgg
aaca
gaattcccccaaatcagagagatgagaaatgctcacgactcgtcactatc
aagtaaattcagcctataatcaaaaatttccacaaaagtaaaatctgtca
ggcccaaattatttcattagtaagttctatcaaacttattagttatagga
aaaagtagttcagtctcctagaaaccataacagagaatatcccccaattc
atttacgaagccaataaaatcctaatactgctttataaaaggctaagaaa
aattacaaacctatttaactcatgaatatgtatgcagagtccctaaataa
aacattaacaaatgaaatcaagcaatatgtaaaaatatcattcattatgc
caccatctcaaagagcagaaaatgtgtttaataactttaacatcctttca
taataaaacgcctgatcgtcggaaaaacaaaggtagtctgttaatcaagt
gagagcttcctgagtctgcactgcacgcaccacactccagatcagatcat
tacaaggccagctttgatttggggcccaaggcagagatgctcgataccac
tctatgttcctataaaggttttcacgataacaattgcaaaagaattacaa
ggtgatcatttctggacacatggacaacaataagcaatctattcataaat
tattaggatcaatgatactgttcaataaggctcttctatgtagaacatga
aaactgaattatggttagcataaaagctgtaaaaaggactagcatttaga
atatggactacgtgtcgggcagtggtcgcgcacaccttaatcccagcatg
caggaggcagaggcaggtggatctctgagaatttgaggccagcctggtct
acagagtgaattgcaggacagccagggctacacagagaaaccctctctct
cgaactaaccagaccaaataaacaaacaaatggtggcgcgggaataaact
ttccagtttcaaacatctagaataacccactagagagtatatacacctat
gaaaaatatacatgtgaatgggactttaagcagccctgataacatactaa
cgtgatcatactgtagctcatcttaactgatgggtggagaatcatgtgaa
ttcctataactgtgacaatattgtaatccagttaaggagtcctagcgatt
gaagtatgggacatctcggcaagagagaaagtcttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_118861310_118862491
seq2: B6Ng01-077L22.b_47_1200 (reverse)

seq1  TGTTCCAAGGTCACGCTCAGGACTTAAAGCCTTTAATTTTCTGCAAGTTG  50
      |||||||||||| || ||| ||||  ||||  |||  |||| |||   ||
seq2  TGTTCCAAGGTC-CG-TCA-GACT--AAGC--TTA--TTTC-GCA--GTG  38

seq1  ACATTTTACTGTTTCAGAGTCCCTAAGCCTCCTACGGCTTTTAAAAGAGC  100
      ||| ||||||||||||||||||   |||   |||||   || ||||||||
seq2  ACA-TTTACTGTTTCAGAGTCC--TAGC--TCTACG--CTTAAAAAGAGC  81

seq1  GATTTCAGATATCCACT-CCCCACAGCTCCAAGAACAATTCATTTCAATC  149
      ||||||||||||||||| |||||||||||||||||||| ||||||| |||
seq2  GATTTCAGATATCCACTCCCCCACAGCTCCAAGAACAA-TCATTTC-ATC  129

seq1  TTGGGACATTGCCCAGAACTCAGCAAAACTAGCATGATGCTTTCAGCTTG  199
       ||||||| ||||||| ||||||| |||||||||||||||||||||| ||
seq2  -TGGGACA-TGCCCAG-ACTCAGC-AAACTAGCATGATGCTTTCAGC-TG  174

seq1  GCTTTTGATTTTGTTGACAGGCATCAAGCACTAGGTAAGAGGTGGGAAAC  249
      |||||||||||   ||||||||||||||||||||||||||||||||||||
seq2  GCTTTTGATTT--GTGACAGGCATCAAGCACTAGGTAAGAGGTGGGAAAC  222

seq1  TGCTAATATTCTAGATGGTATTTTATTAGGTGTTTTGACCAGATAACAGA  299
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  TGCTAATATTCTAGATGGTA-TTTATTAGGTGTTTTGACCAGATAACAGA  271

seq1  TAATTTTCTTTATTCACATGAATGTTTTAGGGTCATCTAAATAGTGGAAA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTTCTTTATTCACATGAATGTTTTAGGGTCATCTAAATAGTGGAAA  321

seq1  AATATGATGCATAGGTTTTTAAATCACTATTTAAATAACGGTAGAACAAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATGATGCATAGGTTTTTAAATCACTATTTAAATAACGGTAGAACAAA  371

seq1  TTCTGTCTAATCAAAATAAAAGGTGTTTATTAAATCTAAAATAGTTTAGA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTCTAATCAAAATAAAAGGTGTTTATTAAATCTAAAATAGTTTAGA  421

seq1  TGGGCCCTGGGAAAAGTTTTCTGTACCAGAGAGTGGCTTTAAAAAGATTA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCCCTGGGAAAAGTTTTCTGTACCAGAGAGTGGCTTTAAAAAGATTA  471

seq1  GTGTCAGAGAAGGATCTGTAATAGTGTTTTGGTAACACACAGTATTTGTA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCAGAGAAGGATCTGTAATAGTGTTTTGGTAACACACAGTATTTGTA  521

seq1  AATTGATTTCTGCAAATAGCAGAAATAACTTCAGTAACTTAGTTTGAAAT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGATTTCTGCAAATAGCAGAAATAACTTCAGTAACTTAGTTTGAAAT  571

seq1  GAACAACATTAACAGCCTTGACTGTTGATTGAACATTGTCTTGGAAGAGG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAACATTAACAGCCTTGACTGTTGATTGAACATTGTCTTGGAAGAGG  621

seq1  TATATAAGGGGTTCCTGAGCTGAATATTTATTTTAATTGCCTAAATCCTA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATAAGGGGTTCCTGAGCTGAATATTTATTTTAATTGCCTAAATCCTA  671

seq1  TATCGTTATTAATGTTATTTTTTTAATTAGTTGAAATTAACCAGATAAGA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCGTTATTAATGTTATTTTTTTAATTAGTTGAAATTAACCAGATAAGA  721

seq1  AGTTTAAAGCTAAAGTTGATGCTGGATATGTCTCCTGATAAACATTGGTG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTAAAGCTAAAGTTGATGCTGGATATGTCTCCTGATAAACATTGGTG  771

seq1  AAGTGATGCTTTAAAAATAAGCACAAATAGGGCTGGAGAGATGGCTCAGT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGATGCTTTAAAAATAAGCACAAATAGGGCTGGAGAGATGGCTCAGT  821

seq1  GGTTAAGAGCACTGACTGCTCTTCCAGAGGTCCTGAGTTCAATTCCCAGC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTAAGAGCACTGACTGCTCTTCCAGAGGTCCTGAGTTCAATTCCCAGC  871

seq1  AACTACATGGTAGCTCACAACCATCTCTAATGGGATCTGATGCCCTCTTC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTACATGGTAGCTCACAACCATCTCTAATGGGATCTGATGCCCTCTTC  921

seq1  TAGTGTGTCAGTGACAGTGTACTCATATAAATAAAGTATATATTTTTTAA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGTGTCAGTGACAGTGTACTCATATAAATAAAGTATATATTTTTTAA  971

seq1  AGCACACATATGAGATGGCTCAGTTCAGTAGTTCTTAACCTGGGGGCCTC  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACACATATGAGATGGCTCAGTTCAGTAGTTCTTAACCTGGGGGCCTC  1021

seq1  GACCACTTTGGAGTTGTTTAATGACCTTTTCACAGGGGTTCCCTAAGACC  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCACTTTGGAGTTGTTTAATGACCTTTTCACAGGGGTTCCCTAAGACC  1071

seq1  ATTGGAAAATACAGAAATTTACACTAAGATTCTTAACAGTATTGAAATGA  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGAAAATACAGAAATTTACACTAAGATTCTTAACAGTATTGAAATGA  1121

seq1  CAGCCCTTGCTGCTCTTCAGAAGACCAGAATTC  1182
      |||||||||||||||||||||||||||||||||
seq2  CAGCCCTTGCTGCTCTTCAGAAGACCAGAATTC  1154

seq1: chr10_118775260_118776480
seq2: B6Ng01-077L22.g_68_1253

seq1  GAATTCCCCCAAATCAGAGAGATGAGAAATGCTCACGACTCGTCACTATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCCCAAATCAGAGAGATGAGAAATGCTCACGACTCGTCACTATC  50

seq1  AAGTAAATTCAGCCTATAATCAAAAATTTCCACAAAAGTAAAATCTGTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAAATTCAGCCTATAATCAAAAATTTCCACAAAAGTAAAATCTGTCA  100

seq1  GGCCCAAATTATTTCATTAGTAAGTTCTATCAAACTTATTAGTTATAGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCAAATTATTTCATTAGTAAGTTCTATCAAACTTATTAGTTATAGGA  150

seq1  AAAAGTAGTTCAGTCTCCTAGAAACCATAACAGAGAATATCCCCCAATTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTAGTTCAGTCTCCTAGAAACCATAACAGAGAATATCCCCCAATTC  200

seq1  ATTTACGAAGCCAATAAAATCCTAATACTGCTTTATAAAAGGCTAAGAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTACGAAGCCAATAAAATCCTAATACTGCTTTATAAAAGGCTAAGAAA  250

seq1  AATTACAAACCTATTTAACTCATGAATATGTATGCAGAGTCCCTAAATAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTACAAACCTATTTAACTCATGAATATGTATGCAGAGTCCCTAAATAA  300

seq1  AACATTAACAAATGAAATCAAGCAATATGTAAAAATATCATTCATTATGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTAACAAATGAAATCAAGCAATATGTAAAAATATCATTCATTATGC  350

seq1  CACCATCTCAAAGAGCAGAAAATGTGTTTAATAACTTTAACATCCTTTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCATCTCAAAGAGCAGAAAATGTGTTTAATAACTTTAACATCCTTTCA  400

seq1  TAATAAAACGCCTGATCGTCGGAAAAACAAAGGTAGTCTGTTAATCAAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAAAACGCCTGATCGTCGGAAAAACAAAGGTAGTCTGTTAATCAAGT  450

seq1  GAGAGCTTCCTGAGTCTGCACTGCACGCACCACACTCCAGATCAGATCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGCTTCCTGAGTCTGCACTGCACGCACCACACTCCAGATCAGATCAT  500

seq1  TACAAGGCCAGCTTTGATTTGGGGCCCAAGGCAGAGATGCTCGATACCAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAGGCCAGCTTTGATTTGGGGCCCAAGGCAGAGATGCTCGATACCAC  550

seq1  TCTATGTTCCTATAAAGGTTTTCACGATAACAATTGCAAAAGAATTACAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATGTTCCTATAAAGGTTTTCACGATAACAATTGCAAAAGAATTACAA  600

seq1  GGTGATCATTTCTGGACACATGGACAACAATAAGCAATCTATTCATAAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGATCATTTCTGGACACATGGACAACAATAAGCAATCTATTCATAAAT  650

seq1  TATTAGGATCAATGATACTGTTCAATAAGGCTCTTCTATGTAGAACATGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAGGATCAATGATACTGTTCAATAAGGCTCTTCTATGTAGAACATGA  700

seq1  AAACTGAATTATGGTTAGCATAAAAGCTGTAAAAAGGACTAGCATTTAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGAATTATGGTTAGCATAAAAGCTGTAAAAAGGACTAGCATTTAGA  750

seq1  ATATGGACTACGTGTCGGGCAGTGGTCGCGCACACCTTAATCCCAGCATG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGGACTACGTGTCGGGCAGTGGTCGCGCACACCTTAATCCCAGCATG  800

seq1  CAGGAGGCAGAGGCAGGTGGATCTCTGAGAATTTGAGGCCAGCCTGGTCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAGGCAGAGGCAGGTGGATCTCTGAGAATTTGAGGCCAGCCTGGTCT  850

seq1  ACAGAGTGAATTGCAGGACAGCCAGGGCTACACAGAGAAACCCTCTCTCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGTGAATTGCAGGACAGCCAGGGCTACACAGAGAAACCCTCTCTCT  900

seq1  CGAACTAAACCAGACCAAATAAACAAACAAATGGTGGGCGGCGGGGAATA  950
      |||||| |||||||||||||||||||||||||||| ||||   |||||||
seq2  CGAACT-AACCAGACCAAATAAACAAACAAATGGT-GGCG--CGGGAATA  946

seq1  AACTTTCCAGTTTCAAACATCTAGAATAAACCCAACTAAGAGAGGTATAA  1000
      |||||||||||||||||||||||||||||  || ||| ||||| |||| |
seq2  AACTTTCCAGTTTCAAACATCTAGAATAA--CCCACT-AGAGA-GTAT-A  991

seq1  TACACCTATGGAAAAATTATAACATTGTGAAATGGGACTTTAAAGCAGCC  1050
      ||||||||||  |||| ||| ||| |||| ||||||||||| ||||||||
seq2  TACACCTATG--AAAAATAT-ACA-TGTG-AATGGGACTTT-AAGCAGCC  1035

seq1  CTGATTAACATAACTACACGTGATCATAACCTGTAGCTTCATCTTTAAAC  1100
      |||| |||||| |||| |||||||||||  ||||||| |||||||  |||
seq2  CTGA-TAACAT-ACTA-ACGTGATCATA--CTGTAGC-TCATCTT--AAC  1077

seq1  TGATGGGTGGAG-ATCATGTGATTCTAATAAAACTGTGACAATAATTTGT  1149
      |||||||||||| ||||||||| | |  || |||||||||||||  ||||
seq2  TGATGGGTGGAGAATCATGTGAAT-TCCTATAACTGTGACAATA--TTGT  1124

seq1  ATACGAGTGTAAAGGGGAAGGTTTACGAGCTGATGGAAGATGTATGTGAC  1199
      |  | |||         ||||  | | ||| ||| |||   ||||| |||
seq2  AATCCAGT--------TAAGGAGTCCTAGC-GATTGAA---GTATGGGAC  1162

seq1  TACGCAG--AGAGAAAAAGTCTTC  1221
        | | |  ||||| |||||||||
seq2  ATCTCGGCAAGAGAGAAAGTCTTC  1186