BAC Information

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BAC

Clone NameB6Ng01-077N16
Chromosome10 (Build37)
Map Location 35,383,908 - 35,385,058
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC667824
Downstream geneLOC100041585, LOC667860, Hs3st5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-077N16.bB6Ng01-077N16.g
ACCDH893719DH893720
length1,1391,258
definitionDH893719|Mus musculus domesticus DNA, BAC clone: B6Ng01-077N16, 5' end.DH893720|Mus musculus domesticus DNA, BAC clone: B6Ng01-077N16, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgcaaagagacatgtacttccatgttgattattgtattgtttca
ggagaaaaggacaaaatcagatgaatgtgtaatgtctaaatatagcatgc
atatacaacagctttaatgaaaagtgaaattatatttgaggaaaggcaaa
tgaaacttagactattgaatcaagtgttatgacccagagtctgaaaaagg
aagatactatgttgtctctcatatgcaatttgtattcatgtaaatgaggt
ggtgtgaaatggtataagttagaaaaccagagagaagaagatgagaggag
ctagagaaaggggaacataaaagaacacttgtgacatagaagttaaaaca
agcctattggagtggcagatcacaaaagcttatagaagatatgccagaag
aaagggggaagagaaagaaacattttcttcttttttaaattgaaaagatt
cttctctcatacaatatattctaccctcagttgcctctccccccactcct
ccctccctacaacttcctctctcagctctagattcacttccctcaaacaa
cttttgaaaaagtcataatgaattgtacggtaatgaaaaattaaaactat
gatatttatcttcttatttcctctcagtttcacaaccagaaaaacaatct
catcgaagccatccctttgagtagaaaccatcaaagaaaataagtcaatg
ggatggcaggagctgaacttcaaccacaccatttagcaaactcagaatgg
tataatcacattgactacctcctctatatcccttcagagctgcagtgaca
catggacatcagaactctggcctatttcttcaagggaagtgagctcaatt
cgtttccccctattgtaatcaactggaatgaattttcttccatgcttagt
ttatatgctgcattttctttttatcatcatcatatcatattttattttct
gtgatggtcaataatcccagagacaaatattttgcattttgttcaaacac
tttataaagagggtgaccccaggacattttctaagtaaaatttggaacaa
catttactacatgggagagacatatatagagtgttatggtgtatataatg
atttatgaatttagtagaatagaagaatgccataccatt
gaattctctatttagctctgttccccatttttaatagggttatttggatc
tcttggatctaatttcttgagttctttatgtatattagatattagccctc
tttaaaatgtagggttgataaagatcttttcccaatctgttggttgctgt
tttgtcctattgacagtgtcctttgtcttacagaagctttgcaattttat
gaggttccatttgtcaaatcttggtcatagaacataaatcactggtgttc
tgttcaggaacttttcccatgtactcatatgttcaaggcttttccccaat
ttcttttctactagattaaaagtgtctggttttatgtggaggcccttaga
cttcagatttgtacaggaagataagaattgatcaacttgcattcttctac
atgttgaccgacagctgaaccagcaccatatggagaaaatgctgtatttt
tctgttgtgggtagccagctgctcagctcacatgtctgggttctagtctg
gaaaggcatcttggaaacctggaagagaagagggggcactaggcggtgtg
agagagagacagagctaagacaaaccaggttctgatcaaagctcaatttt
actaattcgtgcaccgagttatgaaggaggggaaggagctaattcccacc
aaataatctcagagtaaagttgcaggtgaacacgggataaatctggaaca
gctagtttgcaggcagtggcagtgggattgtcaggacgatagggcggcaa
gctgcgccctgatgctctctaacactgaaacctgagcaaacaggtttcac
gctggggaggggaggttacatttttccttactggatagtttcagctcctt
tgtcaaacatcaagtgaccatagatgtttgggttcatttcttggtcttca
atcctatgccattgatatacctgactgtcactgtaccaatactatgcaat
ttttattactatttctctgtagtacaacttgaggtcagggatgttgattg
tcccagaagttcttttattattggagaaaagtttttgttatcctggaatt
tttggtactccaatgaattttcaaattgttctttttacctcatggaggat
tgagttgacattggatggggaattgctcaatgtggggaattcctttggga
gaatgcaattgttactatataatacggccaacttggacctgaagtctttg
atggcgtgaacctcgggttcctcctcctagagacatggaagatcctgtgc
cgcaccac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_35383908_35385058
seq2: B6Ng01-077N16.b_47_1185

seq1  GAATTCTGCAAAGAGACATGTACTTCCATGTTGATTATTGTATTGTTTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGCAAAGAGACATGTACTTCCATGTTGATTATTGTATTGTTTCA  50

seq1  GGAGAAAAGGACAAAATCAGATGAATGTGTAATGTCTAAATATAGCATGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAAAAGGACAAAATCAGATGAATGTGTAATGTCTAAATATAGCATGC  100

seq1  ATATACAACAGCTTTAATGAAAAGTGAAATTATATTTGAGGAAAGGCAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATACAACAGCTTTAATGAAAAGTGAAATTATATTTGAGGAAAGGCAAA  150

seq1  TGAAACTTAGACTATTGAATCAAGTGTTATGACCCAGAGTCTGAAAAAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAACTTAGACTATTGAATCAAGTGTTATGACCCAGAGTCTGAAAAAGG  200

seq1  AAGATACTATGTTGTCTCTCATATGCAATTTGTATTCATGTAAATGAGGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATACTATGTTGTCTCTCATATGCAATTTGTATTCATGTAAATGAGGT  250

seq1  GGTGTGAAATGGTATAAGTTAGAAAACCAGAGAGAAGAAGATGAGAGGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTGAAATGGTATAAGTTAGAAAACCAGAGAGAAGAAGATGAGAGGAG  300

seq1  CTAGAGAAAGGGGAACATAAAAGAACACTTGTGACATAGAAGTTAAAACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAGAAAGGGGAACATAAAAGAACACTTGTGACATAGAAGTTAAAACA  350

seq1  AGCCTATTGGAGTGGCAGATCACAAAAGCTTATAGAAGATATGCCAGAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTATTGGAGTGGCAGATCACAAAAGCTTATAGAAGATATGCCAGAAG  400

seq1  AAAGGGGGAAGAGAAAGAAACATTTTCTTCTTTTTTAAATTGAAAAGATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGGGGAAGAGAAAGAAACATTTTCTTCTTTTTTAAATTGAAAAGATT  450

seq1  CTTCTCTCATACAATATATTCTACCCTCAGTTGCCTCTCCCCCCACTCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTCTCATACAATATATTCTACCCTCAGTTGCCTCTCCCCCCACTCCT  500

seq1  CCCTCCCTACAACTTCCTCTCTCAGCTCTAGATTCACTTCCCTCAAACAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCCCTACAACTTCCTCTCTCAGCTCTAGATTCACTTCCCTCAAACAA  550

seq1  CTTTTGAAAAAGTCATAATGAATTGTACGGTAATGAAAAATTAAAACTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTGAAAAAGTCATAATGAATTGTACGGTAATGAAAAATTAAAACTAT  600

seq1  GATATTTATCTTCTTATTTCCTCTCAGTTTCACAACCAGAAAAACAATCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATTTATCTTCTTATTTCCTCTCAGTTTCACAACCAGAAAAACAATCT  650

seq1  CATCGAAGCCATCCCTTTGAGTAGAAACCATCAAAGAAAATAAGTCAATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCGAAGCCATCCCTTTGAGTAGAAACCATCAAAGAAAATAAGTCAATG  700

seq1  GGATGGCAGGAGCTGAACTTCAACCACACCATTTAGCAAACTCAGAATGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGGCAGGAGCTGAACTTCAACCACACCATTTAGCAAACTCAGAATGG  750

seq1  TATAATCACATTGACTACCTCCTCTATATCCCTTCAGAGCTGCAGTGACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATCACATTGACTACCTCCTCTATATCCCTTCAGAGCTGCAGTGACA  800

seq1  CATGGACATCAGAACTCTGGCCTATTTCTTCAAGGGAAGTGAGCTCAATT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGACATCAGAACTCTGGCCTATTTCTTCAAGGGAAGTGAGCTCAATT  850

seq1  CGTTTCCCCCTATTGTAATCAACTGGAATGAATTTTCTTCCATGCTTAGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTTCCCCCTATTGTAATCAACTGGAATGAATTTTCTTCCATGCTTAGT  900

seq1  TTATATGCTGCATTTTCTTTTTATCATCATCATATCATATTTTATTTTCT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATGCTGCATTTTCTTTTTATCATCATCATATCATATTTTATTTTCT  950

seq1  GTGATGGTCAATAATCCCAGAGACAAATATTTTGCATTTTGTTCAAACAC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATGGTCAATAATCCCAGAGACAAATATTTTGCATTTTGTTCAAACAC  1000

seq1  TTTATAAAGA-GGTGACCCCAGGGACATTTTCTAAGTAAAATTTGGAAAC  1049
      |||||||||| |||||||||| |||||||||||||||||||||||| |||
seq2  TTTATAAAGAGGGTGACCCCA-GGACATTTTCTAAGTAAAATTTGG-AAC  1048

seq1  AACATTTACTACATGGAGAGAAACAATAATATTAAGAGTGTTAT-GTGTA  1098
      |||||||||||||||| |||| ||    ||||  |||||||||| |||||
seq2  AACATTTACTACATGG-GAGAGAC----ATATATAGAGTGTTATGGTGTA  1093

seq1  TATTAAAATGATTTTATGAATTTAGTAGAATAGAAGAATGCCATTAAACC  1148
      |||   ||||| ||||||||||||||||||||||||||||||||   |||
seq2  TAT---AATGA-TTTATGAATTTAGTAGAATAGAAGAATGCCAT---ACC  1136

seq1  ATT  1151
      |||
seq2  ATT  1139