BAC Information

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BAC

Clone NameB6Ng01-078A07
Chromosome10 (Build37)
Map Location 104,053,651 - 104,054,363
singlet/doubletsinglet
Overlap genenone
Upstream geneEG627488, EG667692, EG667695, LOC100043292
Downstream geneLOC100042383, Tmtc2, EG627573
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-078A07.bB6Ng01-078A07.g
ACCDH893837DH893838
length1,255940
definitionDH893837|Mus musculus domesticus DNA, BAC clone: B6Ng01-078A07, 5' end.DH893838|Mus musculus domesticus DNA, BAC clone: B6Ng01-078A07, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggcccatacctaaccatgataaaaagcaatctgcagcaaacc
agtagccaacatcaaagtaaatggtgagaagctgtaagcaataccactaa
aatcagggactagacaaggctgcccactttctccctacctattcaacatg
gtacttgaagtcctagacagaaccattcgacaacaaaaggagatcaagat
acaaattggaaaggaaaagtcaaaatatcactttttgcagatgatatgat
agtatatataagtaactctaaaaattccaccagagaactcctaaacctga
taaacagcttcagtgaagtagctggatataaaattaactcaatggccttt
ctctacacaaagaataaactagagtcaccatgcctgacctaaagctgtat
tacagagcaattgtgataaaaactgcatggtactggtatagcaacagaca
agtagaccaatggaatagaattgaagacccagaaatgaacccacacacct
atggtcacttgatttttgacaagggagctaataccttccagtggaaaaaa
ggcagcattttcaacaaatggtgctggcacaactggtggtattcatgtag
aagaacgcaaattgatccattcctatctttttgtactaaagtcaaatcta
agtggattaaggaactccacataaaaccagagacacttaaacttatagag
gagaaagtagggaaaagcctcgaagatatgggtacagtgaaaatattcca
gaatagaacagcaatgtcttgtgctgtaggatctagaatcaacaaatgga
acctcataaaattgcaaagcttctgcaaggcaaaaaacactgtcaataag
acaaaaaggccaccaacagattggaaaaggttctttacctatcctaaatt
agatagtggaataatatctaatgtatgtaaagacccagaagtggactcta
gaaatcaaataaccccattaaaatggggctcagagctaaaaaagaattct
cacctgagatactgatgatgaaagtacctgaaaatgttaagtgtctatca
tcaggaaatgcaatcaaaacaactctgagaatccacctccaacagtcgat
gctagtccaaaatcagtgacgcgaatgctggtgaggatgtgaaaaaagaa
tctctcatgtgtagcttgcagcttgtacacaccctgcaatgtcttcggtt
ctcgaatggacacagcggaagagatactgatatcctctctcgggtatatc
ctgag

gaattcttatctgaggaataccaaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctacattgttggtg
ggattgcaggcttgtacaaccactctggaaatccgtctggcagttcctca
gaaaattggacatagtactaccggagggtccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcccaaa
gaattcacacaatatgtactcactgataagtggatattagtccaaaacct
aggatacccaagatataagatacaatttcctaaacacatgaaactcaaga
aaaatgaagactgaagtgtggacactatacccctccttagaagtgggaac
aaaacacccttggaaggagttacagagacaaagtttggagctgagatgaa
aggatggaccatgtagagactgccttatccagggatccaccccataatca
gcatccaaacgctgacaccattgcatacactaggaagattttatcgaaag
cttcttactcttttacttgctcatgggattttttatcttacttgactgct
ttctcaatactgcatatatacatatatatggggtatgtgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_104053651_104054363
seq2: B6Ng01-078A07.g_70_570 (reverse)

seq1  TTTGCCTAGGAATTTCATAAATTCATTCTTTTTAATAGCTCCATTTACAT  50
                                                        
seq2  --------------------------------------------------  0

seq1  TTAATTTAATTAATGTAATTACAATTAATTAATTTATTAATTAAATAATT  100
                                                        
seq2  --------------------------------------------------  0

seq1  TAATAATTTAATTGATAAATTAATTTAATTAATTAATTTAATTAATTAAA  150
                                                        
seq2  --------------------------------------------------  0

seq1  TTAAATAATAATTTAATAATAAATTAAATATTTTAAAATTAATAATAATT  200
                                                        
seq2  --------------------------------------------------  0

seq1  TTATAAGTAAATAATTTAATTAATGTAATTTAATTAATGTAATTACATTA  250
                    |||   ||  | ||||| |      ||| | |||| 
seq2  --------------TTTGGCTA--GGAATTTCA------TAAATTCATTC  28

seq1  CATTTAATAG----------CTCCATTGTGTAAATGTACCACATTTTCTG  290
        ||||||||          |||||||||||| |||||||||||||||||
seq2  TTTTTAATAGCTGAGTAGTACTCCATTGTGTAGATGTACCACATTTTCTG  78

seq1  TATCTATTCCTCTGTTGAGGGGCATCTGGGTTCTTTCCAGCTCCTGGCTA  340
      |||| ||||||||||||||||||||||||||||||||||||| |||||||
seq2  TATCCATTCCTCTGTTGAGGGGCATCTGGGTTCTTTCCAGCTTCTGGCTA  128

seq1  TTATAAATAAGGCTGCTATGAATATAGTGGAGCATGTGTCCTTCTTACCG  390
      |||||||||||||||||||||| |||||||||||||||||||||||||| 
seq2  TTATAAATAAGGCTGCTATGAACATAGTGGAGCATGTGTCCTTCTTACCA  178

seq1  GTTGGGGCATCTTCTGGATATATGCCCAGAAGAGGTATTGCTGGATCCTC  440
      ||||||||||||||||||||||||||||| ||||||||||||||| ||||
seq2  GTTGGGGCATCTTCTGGATATATGCCCAGGAGAGGTATTGCTGGACCCTC  228

seq1  CGGTAGTACTATGTCCAATTTTCTGACGAACCGCCAGACGGATTTCCAGA  490
      |||||||||||||||||||||||||| |||| ||||||||||||||||||
seq2  CGGTAGTACTATGTCCAATTTTCTGAGGAACTGCCAGACGGATTTCCAGA  278

seq1  GTGGTTGTACAAGCCTGCAATCCCACCAACAATGGAGGAGTGTTCCTCTT  540
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  GTGGTTGTACAAGCCTGCAATCCCACCAACAATGTAGGAGTGTTCCTCTT  328

seq1  TCTCCACATCCTCGCCAGCATCTGCTGTCACCTGAATTTTTGATCTTAGC  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCACATCCTCGCCAGCATCTGCTGTCACCTGAATTTTTGATCTTAGC  378

seq1  CATTCTGACTGGTGTGAGGTGGAATCTCAGGGTTGTTTTGATTTGCATTT  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTGACTGGTGTGAGGTGGAATCTCAGGGTTGTTTTGATTTGCATTT  428

seq1  CCCTGATGATTAAGGATGTTGAACATTTTTTCAGGTGCTTCTCTGCCATT  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGATGATTAAGGATGTTGAACATTTTTTCAGGTGCTTCTCTGCCATT  478

seq1  CGGTATTCCTCAGGTGAGAATTC  713
       |||||||||||| | |||||||
seq2  TGGTATTCCTCAGATAAGAATTC  501


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