BAC Information

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BAC

Clone NameB6Ng01-078G05
ChromosomeX (Build37)10 (Build37)
Map Location 31,867,002 - 31,867,4395,442,588 - 5,442,878
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC100040533, LOC100039328, LOC100040552, LOC100040575, LOC100040585, LOC100039362, LOC100040606, LOC100040612, LOC673784, LOC100040650, LOC100040662, LOC100039419, LOC100039429, LOC100040698, LOC630028, LOC100040722
Downstream geneLOC100040732, LOC100040743, LOC385298, LOC100039460, LOC100040781, LOC100039515, LOC100039522, LOC100039473, LOC100039550, LOC100039557, LOC100039573, EG665074
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-078G05.bB6Ng01-078G05.g
ACCDH894100DH894101
length432986
definitionDH894100|Mus musculus domesticus DNA, BAC clone: B6Ng01-078G05, 5' end.DH894101|Mus musculus domesticus DNA, BAC clone: B6Ng01-078G05, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(31,867,002 - 31,867,439)(5,442,588 - 5,442,878)
sequence
acaggtttttatatttcttcactcagtttagggatgaaagctaagtcatt
ttcttcctttctggaaaagcactatttaaatggcattcgtctttgtcata
taccctctaaatatcagggaacattggaggctcttcttttctatttttcg
gtgtccaccctattatcagttttccattgcatgttcattgagattagcca
gctcttttcttcctgatgcttcccactgagtatgaaataatgcaaggtag
tatgtttgtttgcttgcttgtatgtcactgtcagaacaagtttaatgtgt
cctatgccctatgtttgcacgtttatagaatttaacgtgttgagaggagg
agaaatgtaagcacacctttaccctcatgaaggagatgcacctagtgtgt
gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt
gaattccaaaagagactgttcttgtgatagtttggctaaggatatggctt
tctcctgcccttatcttaagaactagcccaagtgattttttttttttgag
atgggtggtgggcagagaaaatttcaagactgcataatgttgagtctctg
gaatggttgttattgatgaggcatatgcaggtctacagtgaaagagagta
ggtttagcaggcatgttctagaaaagaggctgtggtgatttcagtaaaaa
tggcccccataggcttataggaagtgactccattagaaggtgtggcctta
ttagagtaagtatgtcactggggatgggctttggagcctcaggtgctaaa
gccaggcctagtggcatatttctcttcctgctgcctgctgatccagatgt
agaactcagctacctgtacagcaccaggactgcctatgtgccactatgct
tcttgccatgacaataaaggactaaacctctgaaactgtaagccatcccg
aagtaaatgttttcctttataagagttgctgtgatcatggcatctcttca
cagcaacagaaaacctaaccaagacagagggtgttaaggagattagtgcc
actaaggagagatgtatgctgcactggtgtaagggaagggggccctaagg
gtaagcccatattcagctaagcattccaataaagaaagtataaggcctcc
aattcctgatgtttccaagacttattatgaataggtgttggattttgtca
aaggctttcacctcatcaaataagatgatcatgtgtttttttgtctctga
gtttgtttatatagtggatactttgatggattttccatatattaaaccat
ccctgcatccttggaatgaaaccttcttggtcaggatggatgactgtttt
gatgtgtttttggatttggttagtgaaattgtattgaggattttgcatcg
atattcataaggaaattcgtctgaagtctctatctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_31867002_31867439
seq2: B6Ng01-078G05.b_46_483

seq1  GAATTCACAGGTTTTTATATTTCTTCACTCAGTTTAGGGATGAAAGCTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACAGGTTTTTATATTTCTTCACTCAGTTTAGGGATGAAAGCTAA  50

seq1  GTCATTTTCTTCCTTTCTGGAAAAGCACTATTTAAATGGCATTCGTCTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATTTTCTTCCTTTCTGGAAAAGCACTATTTAAATGGCATTCGTCTTT  100

seq1  GTCATATACCCTCTAAATATCAGGGAACATTGGAGGCTCTTCTTTTCTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATATACCCTCTAAATATCAGGGAACATTGGAGGCTCTTCTTTTCTAT  150

seq1  TTTTCGGTGTCCACCCTATTATCAGTTTTCCATTGCATGTTCATTGAGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCGGTGTCCACCCTATTATCAGTTTTCCATTGCATGTTCATTGAGAT  200

seq1  TAGCCAGCTCTTTTCTTCCTGATGCTTCCCACTGAGTATGAAATAATGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCAGCTCTTTTCTTCCTGATGCTTCCCACTGAGTATGAAATAATGCA  250

seq1  AGGTAGTATGTTTGTTTGCTTGCTTGTATGTCACTGTCAGAACAAGTTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAGTATGTTTGTTTGCTTGCTTGTATGTCACTGTCAGAACAAGTTTA  300

seq1  ATGTGTCCTATGCCCTATGTTTGCACGTTTATAGAATTTAACGTGTTGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTCCTATGCCCTATGTTTGCACGTTTATAGAATTTAACGTGTTGAG  350

seq1  AGGAGGAGAAATGTAAGCACACCTTTACCCTCATGAAGGAGATGCACCTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGGAGAAATGTAAGCACACCTTTACCCTCATGAAGGAGATGCACCTA  400

seq1  GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  438
      ||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  438

seq1: chr10_5442588_5442878
seq2: B6Ng01-078G05.g_770_1055 (reverse)

seq1  AAGATAGAGAACTTCAGACCAATATCCCTTATGAATATCGATGCAAAAAT  50
      ||||||||| ||||||||| ||| | |||||||||||||||||| |||||
seq2  AAGATAGAG-ACTTCAGACGAAT-TTCCTTATGAATATCGATGC-AAAAT  47

seq1  CCTCAATAAAGTTCTTGCTAACCGAATCCAAGAACACATCAAAACAATCA  100
      |||||||| | || |  |||||| ||||||| |||||||||||||| |||
seq2  CCTCAATACAATT-TCACTAACCAAATCCAAAAACACATCAAAACAGTCA  96

seq1  TCCATCCTGACCAAGTAGGTTTCATCCCAGGGATGCAGGGATGGTTCAAT  150
      ||||||||||||||| ||||||||| ||| |||||||||||||||| |||
seq2  TCCATCCTGACCAAGAAGGTTTCATTCCAAGGATGCAGGGATGGTTTAAT  146

seq1  ATATGG-AAATCCATCAACGTAATCCATTATATAAACAAACTCAAAGAC-  198
      |||||| ||||||||||| || ||||| |||||||||||||||| |||| 
seq2  ATATGGAAAATCCATCAAAGT-ATCCACTATATAAACAAACTCAGAGACA  195

seq1  AAAAACCACATGATCATCTCATTAGATGCTGAGAAAGCATTTGACAAAAT  248
      ||||| ||||||||||||| ||| ||||  | |||||| |||||||||||
seq2  AAAAAACACATGATCATCTTATTTGATGAGGTGAAAGCCTTTGACAAAAT  245

seq1  CCAACACCCATTCATGATAAAAGTCTTGGAAAGATCAGGAATT  291
      |||||||| |||||| ||  |||||||||||| ||||||||||
seq2  CCAACACCTATTCATAAT--AAGTCTTGGAAACATCAGGAATT  286