BAC Information

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BAC

Clone NameB6Ng01-078H20
Chromosome10 (Build37)
Map Location 58,921,251 - 59,078,489
singlet/doubletdoublet
Overlap genenone
Upstream geneRanbp2, 6230424H07Rik, LOC100038981, Edar, LOC624335, LOC100039099, Sh3md4, Sept10, Ankrd57, LOC664892, P4ha1, LOC100039174, Pla2g12b, Oit3, Ccdc109a
Downstream geneLOC100039225, Cbara1, EG664907, LOC664936, Dnajb12, Ddit4, D10Ertd641e, Ascc1, Spock2, Chst3, LOC100039080, Psap, Cdh23, 4632428N05Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-078H20.bB6Ng01-078H20.g
ACCDH894173DH894174
length8861,073
definitionDH894173|Mus musculus domesticus DNA, BAC clone: B6Ng01-078H20, 5' end.DH894174|Mus musculus domesticus DNA, BAC clone: B6Ng01-078H20, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(58,921,251 - 58,922,134)(59,077,415 - 59,078,489)
sequence
gaattctctcccaaatagtaccccttgctgtttgtggtctgaatggggat
ggccccagaggctcatgtgtttgaatgcttggtccccagttggtggaact
gtttggggaagattaggtgtggccttgatggaggggtgtgttatatatga
gaagtgggctttgagagcttctagccatgctcagtgtgctcacggctgcc
tgcttttgggtcgagatgtgagctctcaggtgctgctccagttcctgcct
gcctttctgcctgcctttctgcctgccctgcctgccctgcctgcctttct
gcctgcctttctgcctgtctttctgcctgcctttctgcctgtctttctgc
ctgtctttctgcctgcctttctgcctgccctgcctgccctgcctttctgc
ctgccctgcctgccctgcctgcctgcctgccctgcctgctgccacgctct
ctgatatcatggtcttgactttcattccactggaaccatgagcccagaca
agcccttctataacatgccctggtcatggtgctttatcacagcatttgaa
ataaggtttacatttgttttagcaaatatgtgttagtttaaaaacaaaac
aacaataacaaaaaaacttcagacatgggttctggcatatagaattaatt
agtttaattaagagacagtgccttcttccgtagctcaagctggccttgaa
ttcatctcctgactgtctcctgagctgggatctcaggcaagcaccacatg
cctgtggaacacattttttataacagtcttctgtgctcactaagcagtat
agctttttccaccctgctgggctgatgttgtagatttctcatcccacagt
catagaacagtttctttcgaagcttttttttttttt
gaattctgtcattagcccaggggcgtgtgtatgtgtagtgttggcggtat
ggtacctgagcttggcatggagttcttgacctaacaggtcagcaggttcc
cttcctttggactttcgaggcccatatgtgttggtctctggccaactctt
gagagaacaagtgtaggtttaatttcataaggtgaacttgtgtagtgtga
tgagaaggctcactgcagctggcccaatagagaaggtgctgccttcagcc
cgtgcatcatgatctgtcttgttctgtttccctgtctcctaagaggaaag
gactagagctttgcagagaggatagccctagacctgtggtagcataaaat
tgtgggaacgcactatgaaaagaaccgaggcgctgagaatacaagatagt
attgctattattagtggtagtgatggacctgagcttccttcttgtgagaa
gattgtactttttcatatttggcatactgacattgctttgctaaagcttt
tgggtgagagccgagtttttctatagttcaattctgatttgcatgtatga
tagcctccagttatgttctctgaaagacatacaggccacccccaaaatgt
gatggcagtcttttccctctgaactattggaaaatttcccgagctatctt
tgtttttccaatgaagcatcctccgattttgcagttttgttcttaatact
gtttgggtgtggtattcaagtggtgtttgaaaatgtgtgcctcagatgca
ccggtctctgtgtgtgtcttccttgtagagctacttcagacaatattctt
ctgtgctattctggggtgggtaaaagtgatgaactgaatctgttactgaa
agcacatttaaaatgaagtgttatttttgaagggcagaagtgttgtcatg
gaaatggtgacttgtaaattgacttaaggagtccaaggtttgaaaagagt
gaacgtgcttgtttcaacacgtagaagcagatctgaattctggtccagtt
gctctaaagccatcatgaagtaaccccatcgatttctatggattcttcat
gtggccattccgtttgaaggatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_58921251_58922134
seq2: B6Ng01-078H20.b_34_919

seq1  GAATTCTCTCCCAAATAGTACCCCTTGCTG-TGGTGGTCTGAATGGGGAT  49
      |||||||||||||||||||||||||||||| | |||||||||||||||||
seq2  GAATTCTCTCCCAAATAGTACCCCTTGCTGTTTGTGGTCTGAATGGGGAT  50

seq1  GGCCCCAGAGGCTCATGTGTTTGAATGCTTGGTCCCCAGTTGGTGGAACT  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCCAGAGGCTCATGTGTTTGAATGCTTGGTCCCCAGTTGGTGGAACT  100

seq1  GTTTGGGGAAGATTAGGTGTGGCCTTGATGGAGGGGTGTGTTATATATGA  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGGGGAAGATTAGGTGTGGCCTTGATGGAGGGGTGTGTTATATATGA  150

seq1  GAAGTGGGCTTTGAGAGCTTCTAGCCATGCTCAGTGTGCTCACGGCTGCC  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTGGGCTTTGAGAGCTTCTAGCCATGCTCAGTGTGCTCACGGCTGCC  200

seq1  TGCTTTTGGGTCGAGATGTGAGCTCTCAGGTGCTGCTCCAGTTCCTGCCT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTTGGGTCGAGATGTGAGCTCTCAGGTGCTGCTCCAGTTCCTGCCT  250

seq1  GCCTTTCTGCCTGCCTTTCTGCCTGCCCTGCCTGCCCTGCCTGCCTTTCT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTTCTGCCTGCCTTTCTGCCTGCCCTGCCTGCCCTGCCTGCCTTTCT  300

seq1  GCCTGCCTTTCTGCCTGTCTTTCTGCCTGCCTTTCTGCCTGTCTTTCTGC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGCCTTTCTGCCTGTCTTTCTGCCTGCCTTTCTGCCTGTCTTTCTGC  350

seq1  CTGTCTTTCTGCCTGCCTTTCTGCCTGCCCTGCCTGCCCTGCCTTTCTGC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTTTCTGCCTGCCTTTCTGCCTGCCCTGCCTGCCCTGCCTTTCTGC  400

seq1  CTGCCCTGCCTGCCCTGCCTGCCTGCCTGCCCTGCCTGCTGCCACGCTCT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCCTGCCTGCCCTGCCTGCCTGCCTGCCCTGCCTGCTGCCACGCTCT  450

seq1  CTGATATCATGGTCTTGACTTTCATTCCACTGGAACCATGAGCCCAGACA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATATCATGGTCTTGACTTTCATTCCACTGGAACCATGAGCCCAGACA  500

seq1  AGCCCTTCTATAACATGCCCTGGTCATGGTGCTTTATCACAGCATTTGAA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCTTCTATAACATGCCCTGGTCATGGTGCTTTATCACAGCATTTGAA  550

seq1  ATAAGGTTTACA-TTGTTTTAGCAAATATGTGTTAGTTTAAAAACAAAAC  598
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  ATAAGGTTTACATTTGTTTTAGCAAATATGTGTTAGTTTAAAAACAAAAC  600

seq1  AACAATAACAAAAAAACTTCAGACATGGGTTCTGGCATATAGAATTAATT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAATAACAAAAAAACTTCAGACATGGGTTCTGGCATATAGAATTAATT  650

seq1  AG-TTAATTAAGAGACAGTGCCTTCTTCCGTAGCTCAGGCTGGCCTTGAA  697
      || |||||||||||||||||||||||||||||||||| ||||||||||||
seq2  AGTTTAATTAAGAGACAGTGCCTTCTTCCGTAGCTCAAGCTGGCCTTGAA  700

seq1  TTCATCTCCTGACTGTCTCCTGAGCTGGGATCTCAGGCAAGCACCACATG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATCTCCTGACTGTCTCCTGAGCTGGGATCTCAGGCAAGCACCACATG  750

seq1  CCTGTGGAACACA-TTTTTATAACAGTCTTCCTGTGCTCACTAAGGCAGT  796
      ||||||||||||| |||||||||||||||| ||||||||||||| |||||
seq2  CCTGTGGAACACATTTTTTATAACAGTCTT-CTGTGCTCACTAA-GCAGT  798

seq1  ATAGCTTTTTCCACCCTGCTGGGCTGATGTTGTAGATTTCTCATCCCACA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCTTTTTCCACCCTGCTGGGCTGATGTTGTAGATTTCTCATCCCACA  848

seq1  GTCATAGAACAGTTTCTTCCGAAGCTTTTTTTTTTTTT  884
      |||||||||||||||||| |||||||||||||||||||
seq2  GTCATAGAACAGTTTCTTTCGAAGCTTTTTTTTTTTTT  886

seq1: chr10_59077415_59078489
seq2: B6Ng01-078H20.g_67_1139 (reverse)

seq1  CATCTTTCAAACGGAAT-GCCACATGAAGAAT-CATAGAAAATCGGATGG  48
      |||| |||||||||||| |||||||||||||| ||||| ||||| |||||
seq2  CATCCTTCAAACGGAATGGCCACATGAAGAATCCATAG-AAATC-GATGG  48

seq1  GGGTACCTTCATGATGGCTTTAGAGCAACTGGAACAGAAATTCAGAATCT  98
      || || ||||||||||||||||||||||||||| ||| ||||||| ||||
seq2  GGTTA-CTTCATGATGGCTTTAGAGCAACTGGACCAG-AATTCAG-ATCT  95

seq1  GCTTCTACGTGTTGAAACAAGCACGTTCACCTCTTTTCAAACCTTGGACT  148
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  GCTTCTACGTGTTGAAACAAGCACGTTCA-CTCTTTTCAAACCTTGGACT  144

seq1  CC-TAAGTTCATTTACAAGTCACCATTTCCATGACAACACTTCTGCCCTT  197
      || |||||  ||||||||||||||||||||||||||||||||||||||||
seq2  CCTTAAGTCAATTTACAAGTCACCATTTCCATGACAACACTTCTGCCCTT  194

seq1  CAAAAATAACACTTCATTTTTAATTGTGCTTTCAGTTACAGATTCAGTTC  247
      |||||||||||||||| |||||| |||||||||||| |||||||||||||
seq2  CAAAAATAACACTTCA-TTTTAAATGTGCTTTCAGTAACAGATTCAGTTC  243

seq1  ATCACTTTTACCCACCCCAGAATAGCACAGAAGAATATTGTCTGAAGTAG  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACTTTTACCCACCCCAGAATAGCACAGAAGAATATTGTCTGAAGTAG  293

seq1  CTCTACAAGGAAGACACACACAGAGACCGGTGCATCTGAGGCACACATTT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTACAAGGAAGACACACACAGAGACCGGTGCATCTGAGGCACACATTT  343

seq1  TCAAACACCACTTGAATACCACACCCAAACAGTATTAAGAAC-AAACTGC  396
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TCAAACACCACTTGAATACCACACCCAAACAGTATTAAGAACAAAACTGC  393

seq1  AAAATCGGAGGATGCTTCATTGG-AAAACAAAGATAGCTCGGGAAATTTT  445
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  AAAATCGGAGGATGCTTCATTGGAAAAACAAAGATAGCTCGGGAAATTTT  443

seq1  CCAATAGTTCAGAGGGAAAAGACTGCCATCACATTTTGGGGGTGGCCTGT  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATAGTTCAGAGGGAAAAGACTGCCATCACATTTTGGGGGTGGCCTGT  493

seq1  ATGTCTTTCAGAGAACATAACTGGAGGCTATCATACATGCAAATCAGAAT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCTTTCAGAGAACATAACTGGAGGCTATCATACATGCAAATCAGAAT  543

seq1  TGAACTATAGAAAAACTCGGCTCTCACCCAAAAGCTTTAGCAAAGCAATG  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACTATAGAAAAACTCGGCTCTCACCCAAAAGCTTTAGCAAAGCAATG  593

seq1  TCAGTATGCCAAATATGAAAAAGTACAATCTTCTCACAAGAAGGAAGCTC  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTATGCCAAATATGAAAAAGTACAATCTTCTCACAAGAAGGAAGCTC  643

seq1  AGGTCCATCACTACCACTAATAATAGCAATACTATCTTGTATTCTCAGCG  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCCATCACTACCACTAATAATAGCAATACTATCTTGTATTCTCAGCG  693

seq1  CCTCGGTTCTTTTCATAGTGCGTTCCCACAATTTTATGCTACCACAGGTC  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCGGTTCTTTTCATAGTGCGTTCCCACAATTTTATGCTACCACAGGTC  743

seq1  TAGGGCTATCCTCTCTGCAAAGCTCTAGTCCTTTCCTCTTAGGAGACAGG  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGCTATCCTCTCTGCAAAGCTCTAGTCCTTTCCTCTTAGGAGACAGG  793

seq1  GAAACAGAACAAGACAGATCATGATGCACGGGCTGAAGGCAGCACCTTCT  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACAGAACAAGACAGATCATGATGCACGGGCTGAAGGCAGCACCTTCT  843

seq1  CTATTGGGCCAGCTGCAGTGAGCCTTCTCATCACACTACACAAGTTCACC  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTGGGCCAGCTGCAGTGAGCCTTCTCATCACACTACACAAGTTCACC  893

seq1  TTATGAAATTAAACCTACACTTGTTCTCTCAAGAGTTGGCCAGAGACCAA  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGAAATTAAACCTACACTTGTTCTCTCAAGAGTTGGCCAGAGACCAA  943

seq1  CACATATGGGCCTCGAAAGTCCAAAGGAAGGGAACCTGCTGACCTGTTAG  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATATGGGCCTCGAAAGTCCAAAGGAAGGGAACCTGCTGACCTGTTAG  993

seq1  GTCAAGAACTCCATGCCAAGCTCAGGTACCATACCGCCAACACTACACAT  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAGAACTCCATGCCAAGCTCAGGTACCATACCGCCAACACTACACAT  1043

seq1  ACACACGCCCCTGGGCTACTGACAGAATTC  1075
      |||||||||||||||||| |||||||||||
seq2  ACACACGCCCCTGGGCTAATGACAGAATTC  1073