BAC Information

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BAC

Clone NameB6Ng01-078I24
Chromosome10 (Build37)
Map Location 109,665,660 - 109,666,152
singlet/doubletsinglet
Overlap geneLOC100042506
Upstream geneNav3, LOC100042497, LOC100042502
Downstream geneLOC100042510, LOC667855, 9230102K24Rik, LOC100042518, E2f7, Csrp2, Zdhhc17, EG432502, LOC667904, Osbpl8
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-078I24.bB6Ng01-078I24.g
ACCDH894225DH894226
length1,2111,067
definitionDH894225|Mus musculus domesticus DNA, BAC clone: B6Ng01-078I24, 5' end.DH894226|Mus musculus domesticus DNA, BAC clone: B6Ng01-078I24, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcagaactcttcagctggggaacagggtacccgtaagtatagcttt
acaaggtaagtctggtcttgaactttctaacgaaattcaagacagtctat
cagaagtaaagtggggaatagctttacaaggtacgcctggccttgaactt
tctaacgaaattcaagacagtctatcagaagtaaagtgggaaatagcttt
acaaggtacgcctggccttgaactttctaacgaaattcaagacagtctat
cagaagtaaagtgggaaatagctttacaaggtatgtttggccttgaactt
tttctagtgttaggagcctttttgttccttttcacatgttatcaagcggt
taaggcagggctgaaaattctggatgaaattcagggcaatctatcagaag
taaagcggggagagagagtgggagcaaagaggaaatatggtacacaaaat
aagtatacaggcctttccacgggtcttgaacccaaggaaaagtttaggtc
aggtaagaatacctggggagagattagaaggaaagaaaagaaaaaagatc
aatcagcggaggtctctaggagaaggagcctatactcatcactagatgag
ctcaaggagccagttcttaatagttctgaatcagatgaaaaggctattag
ggcctggaaggcgctctcccgagcaggtgaagccactggacaactaacaa
agatcgtccagggacctcaggagtcattctcagattttgtggccagaatg
acagaggcagcagagcgtatttttgcagattcggagcaagccgcacctct
ggtagaatagcttatttatgagcaagccacgcacgagtgcagagcggaca
tagccccaagaaagaacaaaggtttacaagactggctcagggtttgtcgg
gagcttgggggaactctcaacaatgcagcttagcggccgccatcctccaa
tcccaaaatgctccatgggcagaaattaatcaactcatagatcttgtcca
gaaacaactagatgtttttatggcaaataactcagctgggatgtgaataa
agtttctggattgtgcggttacttcattcagtattggagaaatttactag
gcagcctaatttgtcaaaaggtttttttcagtattgttacaggaatggac
ggctgactgacgactcggaattggattgcatcatcgaaggtcaactttca
tcggtttgtgc
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatgtgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtacccatatcttcaaggcttttccccac
tttctcctctataagtttcagttgctctgtagtaaagctttaggtcaggc
atggtgattccaccagaggttcttttatccttgagaagagtttttgctat
cctaggttttttgttattccagatgaatttgcaaattgctccttctaatt
cgttgaagaattgagttggaattttgatggggattgcattgaatctgtag
attgcttttggcaagatagccatttttacaatgttgatcctgccaatcca
tgagcatgggagatctttccatcttctgattgagaagggtgttgtttccc
taatttctttctcagcctgtttattctttgtgtagagaaaggccattgac
ttgtttgagttaattttatatccagctacttcaccgaagctgtgtatcag
gtttaggagtttctctggtggaatttttagggtcacttatatatactatc
atatcatctgcaaaaagtgatatttttgacttcctcctttccaatttgta
tccccttgatctcctttttgtgtcgaattgcttctggctaatacttcaag
tactatgttgaaaggtagggagaaagtgggcagccttgtctagttcctga
tttagtgggatgcttccagcttctcaccatttactttgatgttggctcct
ggtttgctgtgatggcttttatcaggttaggaatgggccttgaatcctga
ttttccaaaacttttatcatgaaggggggttggatcttgcaaatggcttt
ttctgcatctaacgaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_109665660_109666152
seq2: B6Ng01-078I24.g_646_1134 (reverse)

seq1  TCTCGTTAGATGCAGAAAAAG-CATTTGACAAGATCCAACACCCATTCAT  49
      ||||||||||||||||||||| |||||| ||||||||||| ||| |||||
seq2  TCTCGTTAGATGCAGAAAAAGCCATTTG-CAAGATCCAACCCCCCTTCAT  49

seq1  GATAAAAGTTCTGGAAAGATCAGGAATTCAAGGCCCATACCTAAACATGA  99
      |||||||||| |||||| |||||| ||||||||||||| ||| ||| |||
seq2  GATAAAAGTTTTGGAAA-ATCAGG-ATTCAAGGCCCATTCCT-AACCTGA  96

seq1  TAAAAGCAATCTACAGCAAACCAGTAGCCAACATCAAAGTAAATGGAGAG  149
      ||||||| ||| |||||||||||| ||||||||||||||||||||| |||
seq2  TAAAAGCCATC-ACAGCAAACCAGGAGCCAACATCAAAGTAAATGGTGAG  145

seq1  AAGCTGGAAGCAATCCCACTAAAATCAGGGACTAGACAAGGCTGCCCACT  199
      ||||||||||| |||||||| |||||||| ||||||||||||||||||||
seq2  AAGCTGGAAGC-ATCCCACT-AAATCAGGAACTAGACAAGGCTGCCCACT  193

seq1  TTCTCCCTACCTTTTCAACATAGTACTTGAAGTATTAGCCAG-AGCAATT  248
      ||||||||||| |||||||||||||||||||||||||||||| |||||||
seq2  TTCTCCCTACC-TTTCAACATAGTACTTGAAGTATTAGCCAGAAGCAATT  242

seq1  CGACAACAAAAGGAGATCAAGGGGATACAAATTGGAAAGGAGGAAGTC-A  297
      |||||  ||||||||||||||||||||||||||||||||||||||||| |
seq2  CGACACAAAAAGGAGATCAAGGGGATACAAATTGGAAAGGAGGAAGTCAA  292

seq1  AAATATCACTTTTTGCAGATGATATGATAGTATATATAAGTGACCCTAAA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATCACTTTTTGCAGATGATATGATAGTATATATAAGTGACCCTAAA  342

seq1  AATTCCACCAGAG-AACTCCTAAACCTGATAAACAGCTTCGGTGAAGTAG  396
      ||||||||||||| ||||||||||||||||| ||||||||||||||||||
seq2  AATTCCACCAGAGAAACTCCTAAACCTGATACACAGCTTCGGTGAAGTAG  392

seq1  CTGGATATAAAATTAATTCAAACAAGTCAATGGCCTTTCTCTACACAAAG  446
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  CTGGATATAAAATTAACTCAAACAAGTCAATGGCCTTTCTCTACACAAAG  442

seq1  AATAAACAGGCTGAGAAAGAAATTAGGGAAACAACACCCTTCTCAAT  493
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAACAGGCTGAGAAAGAAATTAGGGAAACAACACCCTTCTCAAT  489