BAC Information

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BAC

Clone NameB6Ng01-078L13
Chromosome10 (Build37)
Map Location 71,367,957 - 71,369,071
singlet/doubletsinglet
Overlap genenone
Upstream geneBicc1, LOC622551, C730027H18Rik, Tfam, Ube2d1, LOC665472, Zcd1, Ipmk, LOC100039860, LOC216081, EG216082, LOC622812, EG327767
Downstream gene1700049L16Rik, LOC100040505, Zwint
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-078L13.bB6Ng01-078L13.g
ACCDH894344DH894345
length1,097284
definitionDH894344|Mus musculus domesticus DNA, BAC clone: B6Ng01-078L13, 5' end.DH894345|Mus musculus domesticus DNA, BAC clone: B6Ng01-078L13, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaaaattgtgaccagaagtggtcagctgacaacggagaagaaaaa
ccattgttataatttgcatatagaagcaattccaactggcacagaagaaa
tagacattaaaacaagacacaacctagatggtaaaagtaccagcaggatt
cattttactatggaagtgtccatataacttacctgttttttttgttgttt
ttttgtttttttaaaaaaaaaacaggtccagcaaggctgagtaaggggag
gtttgacacagttcctgtccctggagcattgccaggctgttgtttttgtg
atcctcacatagactgatggttgctgttgccccaaggctgatctgctgtc
tttactactccgcttacaatctttctttctgggaaacatacttcccccca
ttacttagaactaatcatgccacagtaattgaaacaggggcagttttcag
gaatgaggactggagatggtcatgaggctgtggaggatgaggagcaggcc
ttctgcttggcctttagggccacaggaaaggatctaaacaagatatccac
aggggcattaaagcctacatggtcttttgtagaaatagttctttgccaga
cttggccttgaaagtgaatcatgaggagacacatgtaccctctggtccaa
taagtgttgcgttgattagccagggtgaacttagggccatcaaggataga
gagtaacagtggtcttaggaagaaaaggtatggagagaaaaaataggaaa
ttatatatgatttaggtataaatagcagtagaaggagaatacatgaagct
atgaaattgctaggatgaagaaatgaggattagagaattaacagatgatg
tagaaaatgtaaaaagttaaaaggcttttctttttctttttttttttagc
tgaagaattggagataacaatgcctgaacgtattagagaaagctaccatt
tgactatataaattctatttttgtaagaatcgatttcatttagtagtctg
tcatctttccatttttacatgagatagttactaacgactgctgtctgctg
tcccgaaactgtagagctgtgactcacctaccctgatgagtaggctg

ctgatctttccaagacttttaacatgaagggaaattatattttgttaaat
gccttttcagcgcctaatgaaatgataatgtggttttattctttgagttt
gtttatattaggaaaaaagctttgaatactcaggacataactcacagatc
atatgaagctcaagaaggaagacaaagtgtggatacttcagtcctactta
gaagggggaacaaaataatcacaggaggtagagagagggagaaacctggg
agggagagaagagtgggaggggaaaaggggggtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_71367957_71369071
seq2: B6Ng01-078L13.b_43_1139 (reverse)

seq1  CAGCCTACTCATCATGGGTAGCTGAGTCACAGCTCTTACAGTTTTCTGGT  50
      |||||||||||||| |||||| ||||||||||||| ||||||||   || 
seq2  CAGCCTACTCATCA-GGGTAGGTGAGTCACAGCTC-TACAGTTT--CGGG  46

seq1  ACAGCAGACAGCAGTCGTTAGTAACTATTCTCATGTAAAAATAGAAAGAT  100
      ||||||||||||||||||||||||||| |||||||||||||| |||||||
seq2  ACAGCAGACAGCAGTCGTTAGTAACTA-TCTCATGTAAAAATGGAAAGAT  95

seq1  GACAGACTACTAAAATGAAATCGATTCCTTACAAAAATTAGAATTTATAT  150
      ||||||||||| |||||||||||||| |||||||||| ||||||||||||
seq2  GACAGACTACT-AAATGAAATCGATT-CTTACAAAAA-TAGAATTTATAT  142

seq1  AAGTCAAATGGTTAGCTTTCTCTAATACGTTTCAGGCATTGTTATCTCCA  200
       |||||||||| ||||||||||||||||| ||||||||||||||||||||
seq2  -AGTCAAATGG-TAGCTTTCTCTAATACG-TTCAGGCATTGTTATCTCCA  189

seq1  ATTCTTCAGCTAAAAAAAAAAAAAAAAAAAAAAAAGAAAAGCCTTTTAAC  250
      |||||||||||       ||||||||||| ||||||||||||||||||||
seq2  ATTCTTCAGCT-------AAAAAAAAAAAGAAAAAGAAAAGCCTTTTAAC  232

seq1  TTTTTACATTTTCTACATCATCTGTTAATTCTCTAATCCTCATTTCTTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTACATTTTCTACATCATCTGTTAATTCTCTAATCCTCATTTCTTCA  282

seq1  TCCTAGCAATTTCATAGCTTCATGTATTCTCCTTCTACTGCTATTTATAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAGCAATTTCATAGCTTCATGTATTCTCCTTCTACTGCTATTTATAC  332

seq1  CTAAATCATATATAATTTCCTATTTTTTCTCTCCATACCTTTTCTTCCTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAATCATATATAATTTCCTATTTTTTCTCTCCATACCTTTTCTTCCTA  382

seq1  AGACCACTGTTACTCTCTATCCTTGATGGCCCTAAGTTCACCCTGGCTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCACTGTTACTCTCTATCCTTGATGGCCCTAAGTTCACCCTGGCTAA  432

seq1  TCAACGCAACACTTATTGGACCAGAGGGTACATGTGTCTCCTCATGATTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACGCAACACTTATTGGACCAGAGGGTACATGTGTCTCCTCATGATTC  482

seq1  ACTTTCAAGGCCAAGTCTGGCAAAGAACTATTTCTACAAAAGACCATGTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTCAAGGCCAAGTCTGGCAAAGAACTATTTCTACAAAAGACCATGTA  532

seq1  GGCTTTAATGCCCCTGTGGATATCTTGTTTAGATCCTTTCCTGTGGCCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTTAATGCCCCTGTGGATATCTTGTTTAGATCCTTTCCTGTGGCCCT  582

seq1  AAAGGCCAAGCAGAAGGCCTGCTCCTCATCCTCCACAGCCTCATGACCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGCCAAGCAGAAGGCCTGCTCCTCATCCTCCACAGCCTCATGACCAT  632

seq1  CTCCAGTCCTCATTCCTGAAAACTGCCCCTGTTTCAATTACTGTGGCATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAGTCCTCATTCCTGAAAACTGCCCCTGTTTCAATTACTGTGGCATG  682

seq1  ATTAGTTCTAAGTAATGGGGGGAAGTATGTTTCCCAGAAAGAAAGATTGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGTTCTAAGTAATGGGGGGAAGTATGTTTCCCAGAAAGAAAGATTGT  732

seq1  AAGCGGAGTAGTAAAGACAGCAGATCAGCCTTGGGGCAACAGCAACCATC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCGGAGTAGTAAAGACAGCAGATCAGCCTTGGGGCAACAGCAACCATC  782

seq1  AGTCTATGTGAGGATCACAAAAACAACAGCCTGGCAATGCTCCAGGGACA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTATGTGAGGATCACAAAAACAACAGCCTGGCAATGCTCCAGGGACA  832

seq1  GGAACTGTGTCAAACCTCCCCTTACTCAGCCTTGCTGGACCTGTTTTTTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACTGTGTCAAACCTCCCCTTACTCAGCCTTGCTGGACCTGTTTTTTT  882

seq1  TTTAAAAAAACAAAAAAACAACAAAAAAAACAGGTAAGTTATATGGACAC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAAAAACAAAAAAACAACAAAAAAAACAGGTAAGTTATATGGACAC  932

seq1  TTCCATAGTAAAATGAATCCTGCTGGTACTTTTACCATCTAGGTTGTGTC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATAGTAAAATGAATCCTGCTGGTACTTTTACCATCTAGGTTGTGTC  982

seq1  TTGTTTTAATGTCTATTTCTTCTGTGCCAGTTGGAATTGCTTCTATATGC  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTTAATGTCTATTTCTTCTGTGCCAGTTGGAATTGCTTCTATATGC  1032

seq1  AAATTATAACAATGGTTTTTCTTCTCCGTTGTCAGCTGACCACTTCTGGT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTATAACAATGGTTTTTCTTCTCCGTTGTCAGCTGACCACTTCTGGT  1082

seq1  CACAATTTTGAATTC  1115
      |||||||||||||||
seq2  CACAATTTTGAATTC  1097


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