BAC Information

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BAC

Clone NameB6Ng01-078N23
Chromosome10 (Build37)
Map Location 30,718,936 - 30,720,071
singlet/doubletsinglet
Overlap genenone
Upstream geneGm232, LOC667696, LOC100040542, 2610036L11Rik, LOC212815, Trmt11, Hint3, Ncoa7, LOC382354, Hey2
Downstream geneLOC654431, EG432448, Hddc2, Tpd52l1, LOC100041294, Ibrdc1, LOC666055, LOC667752, LOC100040638, Tcba1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-078N23.bB6Ng01-078N23.g
ACCDH894454DH894455
length1,118901
definitionDH894454|Mus musculus domesticus DNA, BAC clone: B6Ng01-078N23, 5' end.DH894455|Mus musculus domesticus DNA, BAC clone: B6Ng01-078N23, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctagaaaggggtgctttctgagtccttaaactaatacaaaattac
acaggctcagttgtagaatgggtaattactcttttatgtctaagaattta
atcttcacaataagacaaagatatttgctgccaagcctgaggacctgagt
tcaatacccagagcacaagtagtggatggagagaaacacatcgttcaggt
tgtcctctcacctgcacaggtaggctgtggcacaccctgcccccaaatat
acatacattcatacatactttgattaatttaaaaagacatagaagtacca
acagacccttccatgcaatgaaagttaacatgtaaagtttcactgtgata
tttaagcatctagatatgtgagtgggtgtctctgtgtgttcatgtatttt
atcattggtattgggaatgaagctcagaacattgttgatcttgtaagtgg
tgagcatacccatttgtctctgtcaactttggctatagctacaccaacaa
gacatttaagaaaggtccagcacttatcagctagtgttatgtcagtaatg
catagacagaagcatttgcaaggccaggcttttcctctaaaagcccctgg
gctaatggaacaatgtctgacataatattggtgaccagtagatatttatt
gagaggagaagccatcctagactatggctacagtcatcaaatgtttaaaa
gaagaatgaactcagacagaaaatgaatcatttaatatttacaggtatat
ggacagttaacatttttaagatcatgtgatcttaaaggaacactaatggt
gctaaaacttcatgacttctttagaatggtcaactgaatttttttctatc
atgagagagagtcaggcatttagtagaatttggcacaatctgtctacctg
ggtctgttgtctgcctgagaaggcaggactttgactgatttaagaactca
tactgaagtcaccataaacagcatgcccgagagcttgtcgtgggcacatt
attctgtgtgtgtgtcacagtgtggagctacagtgtcacatattgtgatg
aaagatgtcagaccatggtgtctgtggtacagatccatgccaggatctcg
gctagaagcttagacctt

gaattctcacctgaggaacaccaaatggcagagaagcacctgaaaaaatg
ttcagcatccttaatcatcagggaaatgcaaatcaaagcaaccctgagat
tccacctcacaccagtcagaatgggtaagattaaaaattcaggtgacagc
agatgctggagaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctgggggttcctca
gaaaattggacatagtactactggaggatcctgcaatacctctcctaggc
atatatccagaagatgttccaaccggtaagaaggacacatgctccactat
gttcagagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatttacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattgctaggcaa
attgatggaccgggagggcatcatcctgagtgaggtaacccaatcacaaa
ggaactcacacaatatgtactcactgataagtggatattggcccagaaac
ttaggatacccaagatataggatacaattcgctaaacacttaaaacttca
agaataacgaagaccaaagtgtggacacttttcccctttctagaaattgg
gaacaaaccacccttgaaggagttacagagacaagtttggagctgtgaca
aaggatgaccatctaaagactgccttatctggggtatccttctctatatc
agtttcaacggacaacatgtctaacataagagttttcgtgagagacaata
tgtgtttcttgtgaatatgacgggcctgcaaaccaaatgggagctctcat
g
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_30718936_30720071
seq2: B6Ng01-078N23.b_46_1163

seq1  GAATTCTAGAAAGGGGTGCTTTCTGAGTCCTTAAACTAATACAAAATTAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAGAAAGGGGTGCTTTCTGAGTCCTTAAACTAATACAAAATTAC  50

seq1  ACAGGCTCAGTTGTAGAATGGGTAATTACTCTTTTATGTCTAAGAATTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGCTCAGTTGTAGAATGGGTAATTACTCTTTTATGTCTAAGAATTTA  100

seq1  ATCTTCACAATAAGACAAAGATATTTGCTGCCAAGCCTGAGGACCTGAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTCACAATAAGACAAAGATATTTGCTGCCAAGCCTGAGGACCTGAGT  150

seq1  TCAATACCCAGAGCACAAGTAGTGGATGGAGAGAAACACATCGTTCAGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATACCCAGAGCACAAGTAGTGGATGGAGAGAAACACATCGTTCAGGT  200

seq1  TGTCCTCTCACCTGCACAGGTAGGCTGTGGCACACCCTGCCCCCAAATAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCTCTCACCTGCACAGGTAGGCTGTGGCACACCCTGCCCCCAAATAT  250

seq1  ACATACATTCATACATACTTTGATTAATTTAAAAAGACATAGAAGTACCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATACATTCATACATACTTTGATTAATTTAAAAAGACATAGAAGTACCA  300

seq1  ACAGACCCTTCCATGCAATGAAAGTTAACATGTAAAGTTTCACTGTGATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGACCCTTCCATGCAATGAAAGTTAACATGTAAAGTTTCACTGTGATA  350

seq1  TTTAAGCATCTAGATATGTGAGTGGGTGTCTCTGTGTGTTCATGTATTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAGCATCTAGATATGTGAGTGGGTGTCTCTGTGTGTTCATGTATTTT  400

seq1  ATCATTGGTATTGGGAATGAAGCTCAGAACATTGTTGATCTTGTAAGTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTGGTATTGGGAATGAAGCTCAGAACATTGTTGATCTTGTAAGTGG  450

seq1  TGAGCATACCCATTTGTCTCTGTCAACTTTGGCTATAGCTACACCAACAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCATACCCATTTGTCTCTGTCAACTTTGGCTATAGCTACACCAACAA  500

seq1  GACATTTAAGAAAGGTCCAGCACTTATCAGCTAGTGTTATGTCAGTAATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATTTAAGAAAGGTCCAGCACTTATCAGCTAGTGTTATGTCAGTAATG  550

seq1  CATAGACAGAAGCATTTGCAAGGCCAGGCTTTTCCTCTAAAAGCCCCTGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGACAGAAGCATTTGCAAGGCCAGGCTTTTCCTCTAAAAGCCCCTGG  600

seq1  GCTAATGGAACAATGTCTGACATAATATTGGTGACCAGTAGATATTTATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAATGGAACAATGTCTGACATAATATTGGTGACCAGTAGATATTTATT  650

seq1  GAGAGGAGAAGCCATCCTAGACTATGGCTACAGTCATCAAATGTTTAAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGGAGAAGCCATCCTAGACTATGGCTACAGTCATCAAATGTTTAAAA  700

seq1  GAAGAATGAACTCAGACAGAAAATGAATCATTTAATATTTACAGGTATAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAATGAACTCAGACAGAAAATGAATCATTTAATATTTACAGGTATAT  750

seq1  GGACAGTTAACATTTTTAAGATCATGTGATCTT-AAGGAACACTAATGGT  799
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  GGACAGTTAACATTTTTAAGATCATGTGATCTTAAAGGAACACTAATGGT  800

seq1  GCTAAAACTTCATGACTTCTTTAGAATGGTCAACTGAATTTTTTTCTATC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAAAACTTCATGACTTCTTTAGAATGGTCAACTGAATTTTTTTCTATC  850

seq1  ATGAGAGAGAGTCAGGCATTTAGTAGAATTTGGCACAATCTGTCTACCTG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGAGAGAGTCAGGCATTTAGTAGAATTTGGCACAATCTGTCTACCTG  900

seq1  GGTCTGTTGTCTGCCTGAGAAGGCAGGACTTTGACTGATTTAAGAACTCA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTGTTGTCTGCCTGAGAAGGCAGGACTTTGACTGATTTAAGAACTCA  950

seq1  TACTGAAGTCACCATAAACAAGCATGCCCGGAGAGCTTTGTCGTGGGCAC  999
      ||||||||||||||||||| ||||||||| |||||| |||||||||||||
seq2  TACTGAAGTCACCATAAAC-AGCATGCCC-GAGAGC-TTGTCGTGGGCAC  997

seq1  ATTTATTCTGTGTGTGTGTCACAGTGTGGGGAAGGCTACAGTGTCACATA  1049
      | |||||||||||||||||||||||||||     ||||||||||||||||
seq2  A-TTATTCTGTGTGTGTGTCACAGTGTGG----AGCTACAGTGTCACATA  1042

seq1  TGTGGATGAAAGAAGGTTCAGACCATGGTGTCTGGTGGGTACAGATCCCA  1099
      |   ||||||||| |  |||||||||||||||||   ||||||||| |||
seq2  TTGTGATGAAAGATG--TCAGACCATGGTGTCTG--TGGTACAGAT-CCA  1087

seq1  TGCAAGGGGTTCCTCGGCTCAGGGACAGC-TAGACCTT  1136
      ||| |||     ||||||| ||    ||| ||||||||
seq2  TGCCAGG---ATCTCGGCT-AG---AAGCTTAGACCTT  1118


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