BAC Information

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BAC

Clone NameB6Ng01-078O18
Chromosome10 (Build37)
Map Location 124,795,163 - 124,796,203
singlet/doubletsinglet
Overlap genenone
Upstream gene4930503E24Rik, LOC671416, Slc16a7
Downstream geneLOC100042987, EG668313, LOC100042992, LOC668317, LOC100042994, Lrig3, LOC100043547
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-078O18.b
ACCDH894490
length1,051
definitionDH894490|Mus musculus domesticus DNA, BAC clone: B6Ng01-078O18, 5' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttaccctgtcttgatgatgtctttggtgggattgcgaacaaaaa
tgcttctaacactggagaaagttcaaggccagacatacctcgtagggcgg
taatttgatccgcatttctggtgctgcctttagaacgagggatctccctt
gcacacgcgcgctggcacacacacacacacacacacccactcactttgat
cctgctccttctggatgtccctatgcaccctaagatttcccctatatacc
tagtccaacgctttgttgctcccttataatcccttaagaccctcccagtt
gtgaagggtgctgtgtttcttagatttttgaacttatgctgtggataaat
ttgcttctgtcatgcatcacgaataatctatctgggagaacagggctttt
ctcttttctctggaagttacccgggaggacactcagcatcgagtccctat
ttcctatgatgagtaagcacttactccaggactctgagtagctaagtgaa
aacgtcttggacagagaactgttgggaagactgctgtgagcccaggggag
atagactgagactggcatttgggagagaccaggcttatttctgttacctt
accgggagaactggttgctgctattgacagtacacccgactcacatgcgc
tcactgcatcgaagtaagctagtaagtgtggtgtgcaccttggggtgaat
atggcagaatttataaatacattttcccagttctgataaaagccatgcag
tccgaaatgtgttgcaactttattatacaaaatcagtctgtctacatcaa
ctttgggaggctctggtctcgtttgtgttccttggatgtgaacgaagctg
agcactcacggggtggtggtttacactgcagctacaaagctcacaggttc
acacgttggttattgcaagatcccagagctacatcatattggatgttgcc
cacgttgcaataaaaccagtgatgatgttgctctcccacaagctgcttcg
accctgaacttccacttgccttggtgtcacggatgtgctagcagccagtg
t
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_124795163_124796203
seq2: B6Ng01-078O18.b_63_1095 (reverse)

seq1  ACACAGGCTGCTAGCACATCACTGAACACAAGGCAAGTGGAGTTTCAGGG  50
      |||| |||||||||||||||  |||   |||||||||||||  |||||||
seq2  ACACTGGCTGCTAGCACATCCGTGACACCAAGGCAAGTGGAAGTTCAGGG  50

seq1  TTGGAAGCAGCCTGTGGGAGAGCAACATCATCACTCTTTTTATTCCACTG  100
       | |||||||| |||||||||||||||||||||||  ||||||| ||  |
seq2  -TCGAAGCAGCTTGTGGGAGAGCAACATCATCACTGGTTTTATTGCAACG  99

seq1  TGGGCAACATACAATATGATGTAGCTCTGGGATCTTGCATTAACCAATGT  150
      |||||||||| |||||||||||||||||||||||||||| ||||||| ||
seq2  TGGGCAACATCCAATATGATGTAGCTCTGGGATCTTGCAATAACCAACGT  149

seq1  GTGAAAGCCTGTGAGCTTTGTAGCTGCAGTGTAAAACCACCACCCCGTGA  200
      |||||  ||||||||||||||||||||||||| |||||||||||||||||
seq2  GTGAA--CCTGTGAGCTTTGTAGCTGCAGTGT-AAACCACCACCCCGTGA  196

seq1  GTGCTCAGCTTCCTTCACATCCAAGGAACACAAACGAGACCAGAGCCTCC  250
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  GTGCTCAGCTTCGTTCACATCCAAGGAACACAAACGAGACCAGAGCCTCC  246

seq1  CAAAGTTGATGTAGACAGACTGATTTTGTATAATAAAGTTGCAACACATT  300
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  CAAAGTTGATGTAGACAGACTGATTTTGTATAATAAAGTTGCAACACA-T  295

seq1  TTCGGACTGCATGGCTTTTATCAGAACTGGGAAAATGTATTTATAAATTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGGACTGCATGGCTTTTATCAGAACTGGGAAAATGTATTTATAAATTC  345

seq1  TGCCATATTCACCCCAAGGTGCACACCACACTTACTAGCCTACTTCGATG  400
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  TGCCATATTCACCCCAAGGTGCACACCACACTTACTAGCTTACTTCGATG  395

seq1  CAGTGAGCGCCTGTGAGTCGGGTGTACTGTCAATAGCAGCAACCAGTTCT  450
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  CAGTGAGCGCATGTGAGTCGGGTGTACTGTCAATAGCAGCAACCAGTTCT  445

seq1  CCCGGTAAGGTAACAGAAATAAGCCTGGTCTCTCCCAAATGCCAGTCTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGGTAAGGTAACAGAAATAAGCCTGGTCTCTCCCAAATGCCAGTCTCA  495

seq1  GTCTATCTCCCCTGGGCTCACAGCAGTCTTCCCAACAGTTCTCTGTCCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTATCTCCCCTGGGCTCACAGCAGTCTTCCCAACAGTTCTCTGTCCAA  545

seq1  GACGTTTTCACTTAGCTACTCAGAGTCCTGGAGTAAGTGCTTACTCATCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACGTTTTCACTTAGCTACTCAGAGTCCTGGAGTAAGTGCTTACTCATCA  595

seq1  TAGGAAATAGGGACTCGCTGCTGAGTGTCCTCCCTGGTAACTTCCAGAGA  650
      ||||||||||||||||| |||||||||||||||| |||||||||||||||
seq2  TAGGAAATAGGGACTCGATGCTGAGTGTCCTCCCGGGTAACTTCCAGAGA  645

seq1  AAAGAGAAAAGCCCTGTTCTCCCAGATAGATTATTCCTGATCTTAGACAG  700
      |||||||||||||||||||||||||||||||||||| ||||    |||||
seq2  AAAGAGAAAAGCCCTGTTCTCCCAGATAGATTATTCGTGATGCATGACAG  695

seq1  GAACAAGCTTATCCACAGCAGCTGTTCAGAAATCTAAGAAACAC-GCATG  749
       | |||  ||||||||||||   ||||| ||||||||||||||| |||  
seq2  AAGCAAATTTATCCACAGCATAAGTTCAAAAATCTAAGAAACACAGCA--  743

seq1  CCCTTCACAACTGGGAAGATGCTAAGGGATTCTAGTGGAGAGACATAGCG  799
      |||||||||||||||| | |  ||||||||| ||  ||||  ||| ||||
seq2  CCCTTCACAACTGGGAGGGTCTTAAGGGATTATAAGGGAGCAACAAAGCG  793

seq1  CTGGACTAGGTATCTAGGCTAAACTTTAGGGTGCAGAGGGACATCCAGAA  849
       |||||||||||| ||||  |||  |||||||||| ||||||||||||||
seq2  TTGGACTAGGTATATAGGGGAAATCTTAGGGTGCATAGGGACATCCAGAA  843

seq1  GGAGCAGGATCAATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  899
      ||||||||||||| ||| ||| |||||||||||||||||||||   | | 
seq2  GGAGCAGGATCAAAGTGAGTGGGTGTGTGTGTGTGTGTGTGTGCCAGCGC  893

seq1  GTGTGTGTGTGTG---TGTGTGGTATTTAAGTGAAGTGCTTCCTTGCATA  946
      | |||||   | |   |   | || | |||  | ||     ||    || 
seq2  GCGTGTGCAAGGGAGATCCCTCGT-TCTAAAGGCAG---CACCAGAAATG  939

seq1  CTATGATCTAACTGCCCTCCAGCCTAACTTAACCCTAGGCTTGCACTGAA  996
      |   |||| || | ||  ||  |   |  ||   || | |||| |||   
seq2  C--GGATCAAATTACCGCCCTAC--GAGGTATGTCTGGCCTTGAACTTTC  985

seq1  TACAG-GATGGA--GATGGTGTTAAGCAAGACCACCAAAGACATCATC  1041
      | ||| | | ||   ||  |  |  ||||  |||||||||||||||||
seq2  TCCAGTGTTAGAAGCATTTTTGTTCGCAATCCCACCAAAGACATCATC  1033