BAC Information

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BAC

Clone NameB6Ng01-079A07
Chromosome10 (Build37)
Map Location 106,376,817 - 106,555,223
singlet/doubletdoublet
Overlap gene8430416H19Rik
Upstream geneEG667758, EG639162, Ppfia2, Olfr1556-ps1
Downstream geneLin7a, Myf5, Myf6, Ptprq, EG628870
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-079A07.bB6Ng01-079A07.g
ACCDH894557DH894558
length8011,093
definitionDH894557|Mus musculus domesticus DNA, BAC clone: B6Ng01-079A07, 5' end.DH894558|Mus musculus domesticus DNA, BAC clone: B6Ng01-079A07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(106,554,422 - 106,555,223)(106,376,817 - 106,377,920)
sequence
gaattcactttgtagaccaggctggcctcaagctcagaaatctgcctgcc
tctgctttctgagtgctgggattaaaggcgtgcgccaccacacccagctt
gtctgagtttctcttataaacacctctaaaccctacccctaagaaagaga
gggagagagaccggggttagaggatgggcaggagagggggagggagaaag
gtgagagggagaaagatttctgtatggtaatatttgtctaacccccttga
ctactgttcccacctctgttgcctcatgttctccttgttctgctcattgg
ctttgaccatggtaagcactttcttctaaagtagagaagctgtagtacag
tgttatgcttaaggctaaagagataaaatcattctaggtcacatttgact
ttatgtttctgtagttcttgtgtagttgtagagtacaaagcttagagcta
ttagaggagccttaacggtggacccagtgaagccaggcatgagcaggagg
aacgaaaacaggagcctcagaaacattaaaggagagaaagggcaggtggc
ttgggaatgagataccataacaagggaaaccgaatcatgcattgaagttt
aggagttgattggggaatgaaagataattgcctgaaaactatgaaataac
ttaatctggaattttagatttgagtaaaagttgaaaagaggtgatatttt
aactagtgaaggagttatgggggaaaggaggtcaagggacaggaagggag
ggactgagtgattgacaggggaggagtagaacaggatgggaggggggagg
g
gaattcattctctgtctggagacattccaaactgcttcacaatttttttt
ttttagaatcttacttttaaaatccatatattgaaaatatagacataact
tagtgcctgattttcttaggtagttactatagttgcttgccagtcttgac
aacagaatatttacccagagcaacttacatacaggtaggctagatagtgt
ctatttgattggatgaatgaagaatggccattttacttggttatctagag
ttaatggtcatcaacaatgtgttcaatagtgctccaaacatctgaaactt
aatttgtaagatgctatgatctattcaaaggtcattattgaatacttctt
tcaggtatttggttgtgtaactagtaagacaatacaggtaaccaaatata
aatactaaaacttctccagtgtactttttaccaattatcatccagttgct
tcgcttttctatctttaatggggatacatgttgatctggttaggaaactg
ctgattatttttaaaagccaaagataatttgtggataagtcatacagtcc
cctggaatataatatcacaatgtttcatttttccggaatgtcgtgtcagc
tctaaataaagtacattataatactggataaaatatgatgtcattcaacc
attcagtagaaacaagaaaggaagaggggaggctttcttagttgttctac
taatgacatttgcatcgtaaatggcagttttaaatggacaatttaagaga
aaagcatcaaaaatgcatgttgacaacatctgagatcaagaaatcaatca
aaaccccacaaggaggacagtgaaagcttttcctccatgtgaagccaatg
aagcactgataatggacttgcattaaggagctagacagaatgctacttaa
aacacactaactttcttggtaaatagctgtcattgttgttccaaatatgg
gcacttttatataggccactttattgaatttatagatccgtaagttctga
aggaaacatatcaagttttgagggcacattttaggattttacatacagca
cattagacggacctcattatgtgtatttaattttcatacacat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_106554422_106555223
seq2: B6Ng01-079A07.b_47_847 (reverse)

seq1  CCCTCCCCCCTCCCATCCTGTTCTACTCCTCCCCTGTCAATCACTCAGTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCCCCCCTCCCATCCTGTTCTACTCCTCCCCTGTCAATCACTCAGTC  50

seq1  CCTCCCTTCCTGTCCCTTGACCTCCTTTTCCCCCATAACTCCTTCACTAG  100
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  CCTCCCTTCCTGTCCCTTGACCTCC-TTTCCCCCATAACTCCTTCACTAG  99

seq1  TTAAAATATCACCTCTTTTCAACTTTTACTCAAATCTAAAATTCCAGATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAATATCACCTCTTTTCAACTTTTACTCAAATCTAAAATTCCAGATT  149

seq1  AAGTTATTTCATAGTTTTCAGGCAATTATCTTTCATTCCCCAATCAACTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTATTTCATAGTTTTCAGGCAATTATCTTTCATTCCCCAATCAACTC  199

seq1  CTAAACTTCAATGCATGATTCGGTTTCCCTTGTTATGGTATCTCATTCCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAACTTCAATGCATGATTCGGTTTCCCTTGTTATGGTATCTCATTCCC  249

seq1  AAGCCACCTGCCCTTTCTCTCCTTTAATGTTTCTGAGGCTCCTGTTTTCG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCACCTGCCCTTTCTCTCCTTTAATGTTTCTGAGGCTCCTGTTTTCG  299

seq1  TTCCTCCTGCTCATGCCTGGCTTCACTGGGTCCACCGTTAAGGCTCCTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCCTGCTCATGCCTGGCTTCACTGGGTCCACCGTTAAGGCTCCTCT  349

seq1  AATAGCTCTAAGCTTTGTACTCTACAACTACACAAGAACTACAGAAACAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGCTCTAAGCTTTGTACTCTACAACTACACAAGAACTACAGAAACAT  399

seq1  AAAGTCAAATGTGACCTAGAATGATTTTATCTCTTTAGCCTTAAGCATAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTCAAATGTGACCTAGAATGATTTTATCTCTTTAGCCTTAAGCATAA  449

seq1  CACTGTACTACAGCTTCTCTACTTTAGAAGAAAGTGCTTACCATGGTCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGTACTACAGCTTCTCTACTTTAGAAGAAAGTGCTTACCATGGTCAA  499

seq1  AGCCAATGAGCAGAACAAGGAGAACATGAGGCAACAGAGGTGGGAACAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAATGAGCAGAACAAGGAGAACATGAGGCAACAGAGGTGGGAACAGT  549

seq1  AGTCAAGGGGGTTAGACAAATATTACCATACAGAAATCTTTCTCCCTCTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAAGGGGGTTAGACAAATATTACCATACAGAAATCTTTCTCCCTCTC  599

seq1  ACCTTTCTCCCTCCCCCTCTCCTGCCCATCCTCTAACCCCGGTCTCTCTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTTCTCCCTCCCCCTCTCCTGCCCATCCTCTAACCCCGGTCTCTCTC  649

seq1  CCTCTCTTTCTTAGGGGTAGGGTTTAGAGGTGTTTATAAGAGAAACTCAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTCTTTCTTAGGGGTAGGGTTTAGAGGTGTTTATAAGAGAAACTCAG  699

seq1  ACAAGCTGGGTGTGGTGGCGCACGCCTTTAATCCCAGCACTCAGAAAGCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGCTGGGTGTGGTGGCGCACGCCTTTAATCCCAGCACTCAGAAAGCA  749

seq1  GAGGCAGGCAGATTTCTGAGCTTGAGGCCAGCCTGGTCTACAAAGTGAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCAGGCAGATTTCTGAGCTTGAGGCCAGCCTGGTCTACAAAGTGAAT  799

seq1  TC  802
      ||
seq2  TC  801

seq1: chr10_106376817_106377920
seq2: B6Ng01-079A07.g_70_1162

seq1  GAATTCATTCTCTGTCTGGAGACATTCCAAACTGCTTCACAATTTTTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTCTCTGTCTGGAGACATTCCAAACTGCTTCACAATTTTTTTT  50

seq1  TTTTAGAATCTTACTTTTAAAATCCATATATTGAAAATATAGACATAACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAGAATCTTACTTTTAAAATCCATATATTGAAAATATAGACATAACT  100

seq1  TAGTGCCTGATTTTCTTAGGTAGTTACTATAGTTGCTTGCCAGTCTTGAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGCCTGATTTTCTTAGGTAGTTACTATAGTTGCTTGCCAGTCTTGAC  150

seq1  AACAGAATATTTACCCAGAGCAACTTACATACAGGTAGGCTAGATAGTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGAATATTTACCCAGAGCAACTTACATACAGGTAGGCTAGATAGTGT  200

seq1  CTATTTGATTGGATGAATGAAGAATGGCCATTTTACTTGGTTATCTAGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTGATTGGATGAATGAAGAATGGCCATTTTACTTGGTTATCTAGAG  250

seq1  TTAATGGTCATCAACAATGTGTTCAATAGTGCTCCAAACATCTGAAACTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATGGTCATCAACAATGTGTTCAATAGTGCTCCAAACATCTGAAACTT  300

seq1  AATTTGTAAGATGCTATGATCTATTCAAAGGTCATTATTGAATACTTCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGTAAGATGCTATGATCTATTCAAAGGTCATTATTGAATACTTCTT  350

seq1  TCAGGTATTTGGTTGTGTAACTAGTAAGACAATACAGGTAACCAAATATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGTATTTGGTTGTGTAACTAGTAAGACAATACAGGTAACCAAATATA  400

seq1  AATACTAAAACTTCTCCAGTGTACTTTTTACCAATTATCATCCAGTTGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACTAAAACTTCTCCAGTGTACTTTTTACCAATTATCATCCAGTTGCT  450

seq1  TCGCTTTTCTATCTTTAATGGGGATACATGTTGATCTGGTTAGGAAACTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGCTTTTCTATCTTTAATGGGGATACATGTTGATCTGGTTAGGAAACTG  500

seq1  CTGATTATTTTTAAAAGCCAAAGATAATTTGTGGATAAGTCATACAGTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATTATTTTTAAAAGCCAAAGATAATTTGTGGATAAGTCATACAGTCC  550

seq1  CCTGGAATATAATATCACAATGTTTCATTTTTCCGGAATGTCGTGTCAGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGAATATAATATCACAATGTTTCATTTTTCCGGAATGTCGTGTCAGC  600

seq1  TCTAAATAAAGTACATTATAATACTGGATAAAATATGATGTCATTCAACC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAATAAAGTACATTATAATACTGGATAAAATATGATGTCATTCAACC  650

seq1  ATTCAGTAGAAACAAGAAAGGAAGAGGGGAGGCTTTCTTAGTTGTTCTAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAGTAGAAACAAGAAAGGAAGAGGGGAGGCTTTCTTAGTTGTTCTAC  700

seq1  TAATGACATTTGCATCGTAAATGGCAGTTTTAAATGGACAATTTAAGAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGACATTTGCATCGTAAATGGCAGTTTTAAATGGACAATTTAAGAGA  750

seq1  AAAGCATCAAAAATGCATGTTGACAACATCTGAGATCAAGAAATCAATCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCATCAAAAATGCATGTTGACAACATCTGAGATCAAGAAATCAATCA  800

seq1  AAACCCCACAAGGAGGACAGTGAAAGCTTTTCCTCCATGTGAAGCCAATG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCCCACAAGGAGGACAGTGAAAGCTTTTCCTCCATGTGAAGCCAATG  850

seq1  AAGCACTGATAATGGACTTGCATTAAGGAGCTAAGACAAGAATGCTACTT  900
      |||||||||||||||||||||||||||||||| |||| ||||||||||||
seq2  AAGCACTGATAATGGACTTGCATTAAGGAGCT-AGAC-AGAATGCTACTT  898

seq1  AAAACACAACTAACTTTCTTGGTAAATAGCTGTCATTGTTGTTCCAAATA  950
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAC-ACTAACTTTCTTGGTAAATAGCTGTCATTGTTGTTCCAAATA  947

seq1  TGGCCACTTTTATATAGGCCACTTTATTGAATTTATAAGATCCGTAAGTT  1000
      ||| |||||||||||||||||||||||||||||||| |||||||||||||
seq2  TGGGCACTTTTATATAGGCCACTTTATTGAATTTAT-AGATCCGTAAGTT  996

seq1  CTGAAGGAAACATAATCAAGTTTTTGAGGGCACATTTTAAAGAATTTTAC  1050
      ||||||||||||| |||||| |||||||||||||||||  || |||||||
seq2  CTGAAGGAAACAT-ATCAAG-TTTTGAGGGCACATTTT--AGGATTTTAC  1042

seq1  ATACAAGCAACATTAGACAGA-CTCATTATGTTGTATTTATATTTACATA  1099
      |||| ||| ||||||||| || ||||||||| |||||||| |||| ||||
seq2  ATAC-AGC-ACATTAGACGGACCTCATTATG-TGTATTTA-ATTTTCATA  1088

seq1  CACAT  1104
      |||||
seq2  CACAT  1093