BAC Information

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BAC

Clone NameB6Ng01-079F04
Chromosome10 (Build37)
Map Location 68,175,051 - 68,352,814
singlet/doubletdoublet
Overlap geneTmem26
Upstream geneLOC100039618, Zfp365, Plekhk1, Arid5b, LOC100040136, 1700040L02Rik, EG665342
Downstream geneA930033H14Rik, Rhobtb1, LOC100040182, Cdc2a, LOC100039696, EG382371, Ank3, LOC100039734
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-079F04.bB6Ng01-079F04.g
ACCDH894764DH894765
length1,2221,000
definitionDH894764|Mus musculus domesticus DNA, BAC clone: B6Ng01-079F04, 5' end.DH894765|Mus musculus domesticus DNA, BAC clone: B6Ng01-079F04, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(68,351,590 - 68,352,814)(68,175,051 - 68,176,053)
sequence
gaattccaagtcaacaaagcttggctgactttatatatttcaagtactgg
aggatttgaaaatgtgactgtcagactttccatataaatgcagaactatc
agattgttgaataaaacctcgacctattaatcttgtaagttcacaaatta
tcagacttttgtcaatatttagtgtgcttcgtcctctttgatttcctaga
acatcacaaagaaagtgtcactgttgcaccatgaatacctcagtgctcat
ttccaagtaataggagctttagaaaaggccactgtgtgccggagagaccg
ctcagcagttagagctcccactgttcctccaaaggatctaagtttggtcc
ccagcaccctaacatgagacttacaaccatcagctacctcatctccagag
gattctgtgcctttggcctctgtagaggatcccatgtctctggcctctgc
agatacttgaacacatgcatacccttatgtagacatactttgccttcacg
cggctaaaaataataaaaacaaatacttaaaaaatgctactagggcacct
gccaaagatgcagtaacttcagttgtagcccttgaatcttggaatttgaa
tccaattagtatctcaccaggtatgtttccagcaatactagttttgatgg
gcatcattgccattagactgaggtatcttatggccaaattacttggggga
acatctggcgttaacaatattattcacctataatgcttaatattttaatg
tgtaagttccatatgaatgacaaagaggaaaggggcatgtacagaagttt
tgaagtctaataacagcacacttcttccatccatggacaatgtgaccatc
acatgttacaaaatccatgaaaataggaggagggtgttggatcaagactg
caagctcttttcctgggccctgggtaactgaaaaggatgctggccaacaa
cagattattatgatgtcagacagtgaaggggctgatgggaggaaaatgtc
aatagaccaattagagaacaagaaagattctgttgtaatggcctaagagt
ccacacatgatgcactgcttctttgaggtggaaaggctgttaagagcaac
acatgcctaaggaggcatattctgtggttcctaagggcgtctttccttcc
aataatcatagggcaaggatgagcttgcaaggccctagaaaggtggggtg
tcaaaagaagtatctcaaatac
gaattcacatgtgcgtgatgaagaatataaacacagtattttgtgggaca
gttttaagcatccattggcattagcatcctgatcctgggaccaatatttt
agcgaaccagcggaaaattttatttattttatttataccacttaatacac
tgaattaattgaactttcttctgacacataatttcacatgtgcataatgc
atactgacctcatactggctgttttccatctctctgcctcccccaccagc
ctcttcctccccacaaagctctctgacattcctgtccacttattttgctt
tgtgtctcaaaggattaacatttttaagactgtattttaactttgataat
agttttagatttacagaaattttgtaaaacctataacatttcttcatgct
cctttactcaaattttctttcaggtcaacacttcacattatcatgctgca
tttccctcccatatggagccaatattgatttgttatttactctactaatc
aacctctcgccactgcacatcagtttcactagttcttacaagcaatgcca
tttctgtgttccagagtcacattctagatgcagtatgacagggactagct
gtgtcttttctgttttaactgtttttttttttttttttttttttttggag
ggggcctctcaagcggttttccagaggcttaaaaggttttagaaggacac
ccagcaagagagtccttgatctgattttgatgtgtttctcatggtaaagc
tgaaatgataatttttggggtcaatgccattcatccagcatggatgggca
tgagtcatatgtcttgagtaccagagatattaaccttgatctctgtgaac
acatgattttcttatcagtccctgggctgttccttttacttatcatggaa
ggacaaaagctgtttggtttagcttccacgttacaataagacttgaggca
ggagaaagtgctttgaaatattggttgtccatactctaactactcttgca

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_68351590_68352814
seq2: B6Ng01-079F04.b_44_1265 (reverse)

seq1  GTATTTGAGATACCTTCCTCTTGACCACCCAACCTTTCTAGGCCCTGTGC  50
      |||||||||||||  | || |||| ||||| ||||||||||| ||| |||
seq2  GTATTTGAGATAC--TTCTTTTGA-CACCCCACCTTTCTAGGGCCT-TGC  46

seq1  AAGCGTCATCCTTGCCCTATGACTATTGGAAGG-AAGACCGCCCTAGGGA  99
      |||| ||||||||||||||||| |||||||||| |||||  || |||| |
seq2  AAGC-TCATCCTTGCCCTATGATTATTGGAAGGAAAGACGCCCTTAGGAA  95

seq1  CACAAGAATATGCCCTCCTTAGCCATGTGTTGCTCTT-ACAGCCTCTACA  148
      |   |||||||| ||||||||| |||||||||||||| ||||||| | ||
seq2  CCACAGAATATG-CCTCCTTAGGCATGTGTTGCTCTTAACAGCCTTTCCA  144

seq1  CCTC-AAGGAGCAGTGCATCATGTGT-GACTCTTAGGCCATTACAACAGA  196
      |||| ||| ||||||||||||||||| |||||||||||||||||||||||
seq2  CCTCAAAGAAGCAGTGCATCATGTGTGGACTCTTAGGCCATTACAACAGA  194

seq1  ATCTGTCTTGTTCTCCTAATTGGTCTATTGACATTTTTCCTCCCATCAGC  246
      |||| ||||||||| |||||||||||||||||| ||||||||||||||||
seq2  ATCTTTCTTGTTCT-CTAATTGGTCTATTGACA-TTTTCCTCCCATCAGC  242

seq1  CCCTTCACTGTCTGACATCATAATAATCTGTTGTTGGCCAGCATCCTTTT  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTCACTGTCTGACATCATAATAATCTGTTGTTGGCCAGCATCCTTTT  292

seq1  CAGTTACCCAGGGCCCAGG-AAAGAGCTTGCAGTCTTGATCCAACACCCT  345
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  CAGTTACCCAGGGCCCAGGAAAAGAGCTTGCAGTCTTGATCCAACACCCT  342

seq1  CCTCCTATTTTCATGGATTTTGTAACATGTGATGGTCACATTGTCCATGG  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTATTTTCATGGATTTTGTAACATGTGATGGTCACATTGTCCATGG  392

seq1  ATGGAAGAAGTGTGCTGTTATTAGACTTCAAAACTTCTGTACATGCCCCT  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAAGAAGTGTGCTGTTATTAGACTTCAAAACTTCTGTACATGCCCCT  442

seq1  TTCCTCTTTGTCATTCATATGGAACTTACACATTAAAATATTAAGCATTA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCTTTGTCATTCATATGGAACTTACACATTAAAATATTAAGCATTA  492

seq1  TAGGTGAATAATATTGTTAACGCCAGATGTTCCCCCAAGTAATTTGGCCA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTGAATAATATTGTTAACGCCAGATGTTCCCCCAAGTAATTTGGCCA  542

seq1  TAAGATACCTCAGTCTAATGGCAATGATGCCCATCAAAACTAGTATTGCT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGATACCTCAGTCTAATGGCAATGATGCCCATCAAAACTAGTATTGCT  592

seq1  GGAAACATACCTGGTGAGATACTAATTGGATTCAAATTCCAAGATTCAAG  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAACATACCTGGTGAGATACTAATTGGATTCAAATTCCAAGATTCAAG  642

seq1  GGCTACAACTGAAGTTACTGCATCTTTGGCAGGTGCCCTAGTAGCATTTT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTACAACTGAAGTTACTGCATCTTTGGCAGGTGCCCTAGTAGCATTTT  692

seq1  TTAAGTATTTGTTTTTATTATTTTTAGCCGCGTGAAGGCAAAGTATGTCT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGTATTTGTTTTTATTATTTTTAGCCGCGTGAAGGCAAAGTATGTCT  742

seq1  ACATAAGGGTATGCATGTGTTCAAGTATCTGCAGAGGCCAGAGACATGGG  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAAGGGTATGCATGTGTTCAAGTATCTGCAGAGGCCAGAGACATGGG  792

seq1  ATCCTCTACAGAGGCCAAAGGCACAGAATCCTCTGGAGATGAGGTAGCTG  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTCTACAGAGGCCAAAGGCACAGAATCCTCTGGAGATGAGGTAGCTG  842

seq1  ATGGTTGTAAGTCTCATGTTAGGGTGCTGGGGACCAAACTTAGATCCTTT  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTTGTAAGTCTCATGTTAGGGTGCTGGGGACCAAACTTAGATCCTTT  892

seq1  GGAGGAACAGTGGGAGCTCTAACTGCTGAGCGGTCTCTCCGGCACACAGT  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGAACAGTGGGAGCTCTAACTGCTGAGCGGTCTCTCCGGCACACAGT  942

seq1  GGCCTTTTCTAAAGCTCCTATTACTTGGAAATGAGCACTGAGGTATTCAT  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTTTTCTAAAGCTCCTATTACTTGGAAATGAGCACTGAGGTATTCAT  992

seq1  GGTGCAACAGTGACACTTTCTTTGTGATGTTCTAGGAAATCAAAGAGGAC  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGCAACAGTGACACTTTCTTTGTGATGTTCTAGGAAATCAAAGAGGAC  1042

seq1  GAAGCACACTAAATATTGACAAAAGTCTGATAATTTGTGAACTTACAAGA  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCACACTAAATATTGACAAAAGTCTGATAATTTGTGAACTTACAAGA  1092

seq1  TTAATAGGTCGAGGTTTTATTCAACAATCTGATAGTTCTGCATTTATATG  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATAGGTCGAGGTTTTATTCAACAATCTGATAGTTCTGCATTTATATG  1142

seq1  GAAAGTCTGACAGTCACATTTTCAAATCCTCCAGTACTTGAAATATATAA  1195
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGTCTGACAGTCACATTTTCAAATCCTCCAGTACTTGAAATATATAA  1192

seq1  AGTCAGCCAAGCTTTGTTGACTTGGAATTC  1225
      ||||||||||||||||||||||||||||||
seq2  AGTCAGCCAAGCTTTGTTGACTTGGAATTC  1222

seq1: chr10_68175051_68176053
seq2: B6Ng01-079F04.g_69_1068

seq1  GAATTCACATGTGCGTGATGAAGAATATAAACACAGTATTTTGTGGGACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACATGTGCGTGATGAAGAATATAAACACAGTATTTTGTGGGACA  50

seq1  GTTTTAAGCATCCATTGGCATTAGCATCCTGATCCTGGGACCAATATTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTAAGCATCCATTGGCATTAGCATCCTGATCCTGGGACCAATATTTT  100

seq1  AGCGAACCAGCGGAAAATTTTATTTATTTTATTTATACCACTTAATACAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGAACCAGCGGAAAATTTTATTTATTTTATTTATACCACTTAATACAC  150

seq1  TGAATTAATTGAACTTTCTTCTGACACATAATTTCACATGTGCATAATGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTAATTGAACTTTCTTCTGACACATAATTTCACATGTGCATAATGC  200

seq1  ATACTGACCTCATACTGGCTGTTTTCCATCTCTCTGCCTCCCCCACCAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTGACCTCATACTGGCTGTTTTCCATCTCTCTGCCTCCCCCACCAGC  250

seq1  CTCTTCCTCCCCACAAAGCTCTCTGACATTCCTGTCCACTTATTTTGCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCCTCCCCACAAAGCTCTCTGACATTCCTGTCCACTTATTTTGCTT  300

seq1  TGTGTCTCAAAGGATTAACATTTTTAAGACTGTATTTTAACTTTGATAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTCTCAAAGGATTAACATTTTTAAGACTGTATTTTAACTTTGATAAT  350

seq1  AGTTTTAGATTTACAGAAATTTTGTAAAACCTATAACATTTCTTCATGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTAGATTTACAGAAATTTTGTAAAACCTATAACATTTCTTCATGCT  400

seq1  CCTTTACTCAAATTTTCTTTCAGGTCAACACTTCACATTATCATGCTGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTACTCAAATTTTCTTTCAGGTCAACACTTCACATTATCATGCTGCA  450

seq1  TTTCCCTCCCATATGGAGCCAATATTGATTTGTTATTTACTCTACTAATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCCTCCCATATGGAGCCAATATTGATTTGTTATTTACTCTACTAATC  500

seq1  AACCTCTCGCCACTGCACATCAGTTTCACTAGTTCTTACAAGCAATGCCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTCTCGCCACTGCACATCAGTTTCACTAGTTCTTACAAGCAATGCCA  550

seq1  TTTCTGTGTTCCAGAGTCACATTCTAGATGCAGTATGACAGGGACTAGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGTGTTCCAGAGTCACATTCTAGATGCAGTATGACAGGGACTAGCT  600

seq1  GTGTCTTTTCTGTTTTAACTGTTTTTTTTTTTTTTTTTTTTTTTTTGGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCTTTTCTGTTTTAACTGTTTTTTTTTTTTTTTTTTTTTTTTTGGAG  650

seq1  GGGGCCTCTCAAGCGGTTTTCCAGAGGCTTAAAAGGTTTTAGAAGGACAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCCTCTCAAGCGGTTTTCCAGAGGCTTAAAAGGTTTTAGAAGGACAC  700

seq1  CCAGCAAGAGAGTCCTTGATCTGATTTTGATGTGTTTCTCATGGTAAGGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  CCAGCAAGAGAGTCCTTGATCTGATTTTGATGTGTTTCTCATGGTAAAGC  750

seq1  TGAAATGATAATTTTTGGGGTCAATGCCATTCATCCAGCATGGATGGGCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATGATAATTTTTGGGGTCAATGCCATTCATCCAGCATGGATGGGCA  800

seq1  TGAGTCATATGTC-TGAGTACCAGAGATATTAACCTTGATCTCTGTGAAC  849
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  TGAGTCATATGTCTTGAGTACCAGAGATATTAACCTTGATCTCTGTGAAC  850

seq1  ACATGATTTTCTTATCAGTCCCTGGGCTGATTCCTTTACTTATCATGGAA  899
      ||||||||||||||||||||||||||||| | | ||||||||||||||||
seq2  ACATGATTTTCTTATCAGTCCCTGGGCTGTTCCTTTTACTTATCATGGAA  900

seq1  GGGACAAAGCTGTTTGGTTTAGC-TCCACGTTACAATAAGGACCTTGAGG  948
      ||   |||||||||||||||||| ||||||||||||||||   |||||||
seq2  GGACAAAAGCTGTTTGGTTTAGCTTCCACGTTACAATAAG--ACTTGAGG  948

seq1  CAGGAGAAAGTGCTTTGAAATATTGGTTGTCCCATACTCTAACTACCTCC  998
      |||||||||||||||||||||||||||||| |||||||||||||||   |
seq2  CAGGAGAAAGTGCTTTGAAATATTGGTTGT-CCATACTCTAACTAC--TC  995

seq1  TTGCA  1003
      |||||
seq2  TTGCA  1000