BAC Information

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BAC

Clone NameB6Ng01-079F05
Chromosome10 (Build37)
Map Location 83,562,425 - 83,566,120
singlet/doubletdoublet
Overlap genenone
Upstream geneChst11, Slc41a2, D10Wsu102e, LOC666748, Aldh1l2, A230046K03Rik, Appl2, 1500009L16Rik, LOC100041225, C230099D08Rik
Downstream geneLOC432482, Nuak1, Ckap4, Tcp11l2, Polr3b, Rfx4, EG625690, Ric8b, Fhl4, AI597468
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-079F05.bB6Ng01-079F05.g
ACCDH894766DH894767
length1,2191,059
definitionDH894766|Mus musculus domesticus DNA, BAC clone: B6Ng01-079F05, 5' end.DH894767|Mus musculus domesticus DNA, BAC clone: B6Ng01-079F05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(83,562,425 - 83,563,692)(83,565,306 - 83,566,120)
sequence
gaattccccaccatggggaagatactaaactgccagccaattaaattctc
cattctgtacgctgcatatatgtgcataacaacaactagtaaaaagggag
gggggaccagagcccatgaatttgaaggagaacaaagaggcatatgtggg
aaggtttgaggaagagtgggagggagaaataatgtaatatattacaacct
ccaaaaataaaaattaaaaaaaggacacatacaaaagaagaagaaatgga
ggttttgagctgaaaggatagcaggtctgtgccttgcaagcacaaggaca
tgaggttgagccccagagctcatgtttggaaagctggacttggtggtgag
tgcctgcagtctcagcacaggaggtaaagagctaatccttggagggagct
cactacaggtgcattccaggccaatgagaggctctttccaaagcaagaaa
gcaaacaacaatagcaaagtggactggaaacaagagttgaggttgtcccc
tagcccgcacagacacaggcccacagacagacagacagacagacacacac
acacacacacacacacacacacacacaccacttgtattttcaattctaca
gcctcttaatcagaaagaaagagaccaacacagtcctcaaagtgttatca
aaactgtgacacagaaaatccaaccagagaagtggcctgaatctctttct
tggacccaagttaccgccgtgttagggacagatacaaactcccagattgc
agagccatgcattcaagcccagaagcccagaagcccagaagcccagaagc
ccagaagcccagaagcccagaagcagccacggttattcttgacatactaa
cctcttcccttagaggctcagcagcctggaagctgtttagcacagagcag
tggtccccacacgtgagccctggatcactggaggtattccaatggcaact
tgttagaagtgcaaatcttaagctccgttccagacctgctgatcagaaag
tctggggttctaacccatgtttgttttacagcctcagacgatttattcga
gcatattcactgctgaaaatcagtatgaagatctgttcactgattagctg
ttgttctgaagcgcttctgagtcactgaaacctccctctaaagcagataa
gctacggatctatgctaagtgacgatcaggcttccctttagccgtacata
acaatctgtccagaagcaa
gaattcaatcatgcaataaaaccacttgcttcctaggaaggaaaacaaca
acaacaaaacattcccaaaatagcaaaaaacattgtcaagcattgggcat
agtggcgcgcctttgatgctggtgcacaagaggcacaggcaggtagacat
ctccaagtctaaggccagtgtggtctacataacgagttccaagatagctg
gaaaaactacatagggagacactgtcatagatagatagatagatagatag
atagattccttcttgacagctctggaaaccagagatcatttcttccagaa
gcttcccttaagtgcagcacatgttccttcccagaatcctcagtcacata
tcccctttgctctcattgacctgacttgagacacgtgtccattttctgag
gcaggccaggggcggaggggtgacaaagatgattgattcagacctgactc
ctttaaaagaaatttttctttaaagacagatattttccttgccatcccca
aagccagaaattcctaataaaagctattttcataccagagaattgtggtt
ttacttaattgattttcctccctttttttttttttttttttaccacaatt
gtcgttattaggaaggtagatattttaagctgtcttaaaggagagaaaga
atggatttaaccactaggcagcagatttcttgctgcatcttactgctttt
aagatttaaagttcttgcttccattcccttttgaacgtcactcctggggc
agtgggatctccttacccacatgtatgcagaaagtgatgggcccccactt
gtgtcggacgacccttccatgaatcaatgctgggaagctgacttaacatc
aatgactgcctggaacagcagctgaagtccctgagaggcttgaagttccg
agcctgcctgttctgagagtgtgccagctttgtatgacggcaccgcctct
acggcagctaccctgtctgggcttaacatctacttcgttcacacactggg
cactgagtgaggtggggatgcagtcccagtcacagctctacagcaaagag
cttttacag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_83562425_83563692
seq2: B6Ng01-079F05.b_49_1267

seq1  GAATTCCCCACCATGGGGAAGATACTAAACTGCCAGCCAATTAAATTCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCCACCATGGGGAAGATACTAAACTGCCAGCCAATTAAATTCTC  50

seq1  CATTCTGTACGCTGCATATATGTGCATAACAACAACTAGTAAAAAGGGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTGTACGCTGCATATATGTGCATAACAACAACTAGTAAAAAGGGAG  100

seq1  GGGGGACCAGAGCCCATGAATTTGAAGGAGAACAAAGAGGCATATGTGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGACCAGAGCCCATGAATTTGAAGGAGAACAAAGAGGCATATGTGGG  150

seq1  AAGGTTTGAGGAAGAGTGGGAGGGAGAAATAATGTAATATATTACAACCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTTTGAGGAAGAGTGGGAGGGAGAAATAATGTAATATATTACAACCT  200

seq1  CCAAAAATAAAAATTAAAAAAAGGACACATACAAAAGAAGAAGAAATGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAAATAAAAATTAAAAAAAGGACACATACAAAAGAAGAAGAAATGGA  250

seq1  GGTTTTGAGCTGAAAGGATAGCAGGTCTGTGCCTTGCAAGCACAAGGACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTTGAGCTGAAAGGATAGCAGGTCTGTGCCTTGCAAGCACAAGGACA  300

seq1  TGAGGTTGAGCCCCAGAGCTCATGTTTGGAAAGCTGGACTTGGTGGTGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGTTGAGCCCCAGAGCTCATGTTTGGAAAGCTGGACTTGGTGGTGAG  350

seq1  TGCCTGCAGTCTCAGCACAGGAGGTAAAGAGCTAATCCTTGGAGGGAGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGCAGTCTCAGCACAGGAGGTAAAGAGCTAATCCTTGGAGGGAGCT  400

seq1  CACTACAGGTGCATTCCAGGCCAATGAGAGGCTCTTTCCAAAGCAAGAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTACAGGTGCATTCCAGGCCAATGAGAGGCTCTTTCCAAAGCAAGAAA  450

seq1  GCAAACAACAATAGCAAAGTGGACTGGAAACAAGAGTTGAGGTTGTCCCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAACAACAATAGCAAAGTGGACTGGAAACAAGAGTTGAGGTTGTCCCC  500

seq1  TAGCCCGCACAGACACAGGCCCACAGACAGACAGACAGACAGACACACAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCCGCACAGACACAGGCCCACAGACAGACAGACAGACAGACACACAC  550

seq1  ACACACACACACACACACACACACACACCACTTGTATTTTCAATTCTACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACACACACACCACTTGTATTTTCAATTCTACA  600

seq1  GCCTCTTAATCAGAAAGAAAGAGACCAACACAGTCCTCAAAGTGTTATCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCTTAATCAGAAAGAAAGAGACCAACACAGTCCTCAAAGTGTTATCA  650

seq1  AAACTGTGACACAGAAAATCCAACCAGAGAAGTGGCCTGAATCTCTTTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGTGACACAGAAAATCCAACCAGAGAAGTGGCCTGAATCTCTTTCT  700

seq1  TGGACCCAAGTTACCGCCGTGTTAGGGACAGATACAAACTCCCAGATTGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACCCAAGTTACCGCCGTGTTAGGGACAGATACAAACTCCCAGATTGC  750

seq1  AGAGCCATGCATTCAAGCCCAGAAGCCCAGAAGCCCAGAAGCCCAGAAGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCCATGCATTCAAGCCCAGAAGCCCAGAAGCCCAGAAGCCCAGAAGC  800

seq1  CCAGAAGCCCAGAAGCCCAGAAGCAGCCACGGTTATTCTTGACATACTAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAAGCCCAGAAGCCCAGAAGCAGCCACGGTTATTCTTGACATACTAA  850

seq1  CCTCTTCCCTTAGAGGCTCAGCAGCCTGGAAGCTGTTTAGCACAGAGCAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTTCCCTTAGAGGCTCAGCAGCCTGGAAGCTGTTTAGCACAGAGCAG  900

seq1  TGGTCCCCACACGTGAGCCCTGGATCACTGGAGGTATCCAATTGGCAACT  950
      ||||||||||||||||||||||||||||||||||||| | | ||||||||
seq2  TGGTCCCCACACGTGAGCCCTGGATCACTGGAGGTATTCCAATGGCAACT  950

seq1  TGTTAGAAGTGCAAAATCTTAAGCTCCGTTCCAGACCTGCTGATCAGAAA  1000
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  TGTTAGAAGTGC-AAATCTTAAGCTCCGTTCCAGACCTGCTGATCAGAAA  999

seq1  GTCTGGGGTTTCTAACCCAATGGTTTGTATTTTAACAAGCCTTCCAGACG  1050
      |||||||| ||||||||||   |||||  |||||   |||||  ||||||
seq2  GTCTGGGG-TTCTAACCCA--TGTTTG--TTTTA--CAGCCT--CAGACG  1040

seq1  ATTTTATTCGGAGGCATATTCACTGCTGAAAATCAGTAAATGAAAGATCT  1100
      | ||||||||   ||||||||||||||||||||||||  ||| |||||||
seq2  A-TTTATTCG--AGCATATTCACTGCTGAAAATCAGT--ATG-AAGATCT  1084

seq1  GGTTTCAACTGATCTAGCTGTTGTCTCTGAATAGCGCTTTCCTGAAGTCA  1150
      |  ||| |||||| |||||||||| |||||  |||||||  ||| |||||
seq2  G--TTC-ACTGAT-TAGCTGTTGT-TCTGA--AGCGCTT--CTG-AGTCA  1124

seq1  CTGAGAACTCTCCTCCTAAGAGGCAGGATTTAAGCTAACGGGGAATCTAT  1200
      |||| ||| ||||  ||||     || |  |||||| ||||   ||||||
seq2  CTGA-AAC-CTCCCTCTAA-----AGCAGATAAGCT-ACGG---ATCTAT  1163

seq1  GCTGAGGTCGGACAGGGATCCAGGTTGTCTCCCTCTTAGCCTGTCATACA  1250
      ||| ||    |||   ||| |||| |   ||||| ||||||   |||| |
seq2  GCTAAG---TGAC---GAT-CAGGCT---TCCCT-TTAGCCGTACATA-A  1201

seq1  AATTCTGTCCAGAAGCAA  1268
       | |||||||||||||||
seq2  CAATCTGTCCAGAAGCAA  1219

seq1: chr10_83565306_83566120
seq2: B6Ng01-079F05.g_324_1126 (reverse)

seq1  CTGTAAAAAGCTTTCCTTTTGCTGTAGAGCTGTGACCTGGGGCTGCCATC  50
      |||| |||||||     |||||||||||||||||| ||||| ||| ||||
seq2  CTGT-AAAAGCT----CTTTGCTGTAGAGCTGTGA-CTGGGACTG-CATC  43

seq1  CCCACCTCACTCCAGTGCCCAGTGTGTGAACCGGAGGTAGATGTTAAGCC  100
      ||||||||||| |||||||||||||||||||  || ||||||||||||||
seq2  CCCACCTCACT-CAGTGCCCAGTGTGTGAAC--GAAGTAGATGTTAAGCC  90

seq1  CCAGGACAGGGTAGCTGCCGGTAGGGGCGGTGCCGTCATAC-AAGCTGGC  149
      |   ||||||||||||||| |||| |||||||||||||||| ||||||||
seq2  C--AGACAGGGTAGCTGCC-GTAGAGGCGGTGCCGTCATACAAAGCTGGC  137

seq1  ACACCTCTCAGGACAGGCAGGCTCGGAACTTCAAGCCTCTCAGGGACTTC  199
      ||| ||||||| ||||||||||||||||||||||||||||||||||||||
seq2  ACA-CTCTCAGAACAGGCAGGCTCGGAACTTCAAGCCTCTCAGGGACTTC  186

seq1  AGCTGCTGTTCCAGGCAGTCATTGATGTTAAGTCAGCTT-CCAGCATTGA  248
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  AGCTGCTGTTCCAGGCAGTCATTGATGTTAAGTCAGCTTCCCAGCATTGA  236

seq1  TTCATGG-AGGGTCGTCCGACACAAGTGGGGGCCCATCACTTTCTGCATA  297
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATGGAAGGGTCGTCCGACACAAGTGGGGGCCCATCACTTTCTGCATA  286

seq1  CATGTGGGTAAGGAGATCCCACTGCCCCAGGAGTGACGTTCAAAAGGGAA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTGGGTAAGGAGATCCCACTGCCCCAGGAGTGACGTTCAAAAGGGAA  336

seq1  TGGAAGCAAGAAACTTTAAATCTTAAAAGCAGTAAGATGCAGCAAGAAAT  397
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  TGGAAGCAAG-AACTTTAAATCTTAAAAGCAGTAAGATGCAGCAAGAAAT  385

seq1  CTGCTGCCTAGTGGTTAAATCCATTCTTTCTCTCCTTTAAGACAGCTTAA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTGCCTAGTGGTTAAATCCATTCTTTCTCTCCTTTAAGACAGCTTAA  435

seq1  AATATCTACCTTCCTAATAACGACAATTGTGGTAAAAAAAAAAAAAAAAA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATCTACCTTCCTAATAACGACAATTGTGGTAAAAAAAAAAAAAAAAA  485

seq1  AAGGGAGGAAAATCAATTAAGTAAAACCACAATTCTCTGGTATGAAAATA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGAGGAAAATCAATTAAGTAAAACCACAATTCTCTGGTATGAAAATA  535

seq1  GCTTTTATTAGGAATTTCTGGCTTTGGGGATGGCAAGGAAAATATCTGTC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTTATTAGGAATTTCTGGCTTTGGGGATGGCAAGGAAAATATCTGTC  585

seq1  TTTAAAGAAAAATTTCTTTTAAAGGAGTCAGGTCTGAATCAATCATCTTT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAGAAAAATTTCTTTTAAAGGAGTCAGGTCTGAATCAATCATCTTT  635

seq1  GTCACCCCTCCGCCCCTGGCCTGCCTCAGAAAATGGACACGTGTCTCAAG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACCCCTCCGCCCCTGGCCTGCCTCAGAAAATGGACACGTGTCTCAAG  685

seq1  TCAGGTCAATGAGAGCAAAGGGGATATGTGACTGAGGATTCTGGGAAGGA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGTCAATGAGAGCAAAGGGGATATGTGACTGAGGATTCTGGGAAGGA  735

seq1  ACATGTGCTGCACTTAAGGGAAGCTTCTGGAAGAAATGATCTCTGGTTTC  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGTGCTGCACTTAAGGGAAGCTTCTGGAAGAAATGATCTCTGGTTTC  785

seq1  CAGAGCTGTCAAGAAGGA  815
      ||||||||||||||||||
seq2  CAGAGCTGTCAAGAAGGA  803