BAC Information

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BAC

Clone NameB6Ng01-080F22
Chromosome10 (Build37)
Map Location 18,151,531 - 18,152,818
singlet/doubletsinglet
Overlap geneNhsl1
Upstream geneCited2, Txlnb, LOC665321, Heca, 3110003A17Rik, Reps1, LOC100039660, Ccdc28a, LOC627646
Downstream geneHebp2, EG627729, D10Bwg1379e, EG237300, Perp, Tnfaip3, Tpi-rs5, EG637620, Olig3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-080F22.bB6Ng01-080F22.g
ACCDH895529DH895530
length824968
definitionDH895529|Mus musculus domesticus DNA, BAC clone: B6Ng01-080F22, 5' end.DH895530|Mus musculus domesticus DNA, BAC clone: B6Ng01-080F22, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccattgcttccagtcttagtgcatgaactcagaaattaagccagt
tttactgtagaaggcatgtcttgttctggccacatgtgagttatggcttc
ctaagtattctaacacaaggagtaactgagcattgcgatgattcctggat
aacgtgtgattttctttgttagacggttactttagccttgaagattgtgt
ttcttccagctctgtgacaatctcaagaactttggttgtgtgataatgtg
ctttttctgtgagattgttgaaatgagatcgtctctatgatgaatttcct
tggaactgaagcaagctatgatgctcatatctttctgtgtgtgtaattct
ggtgatgttacactcttgacagcctttcagttttgtgaaagaaggtattc
ctggcttgtttgctgtgtaggacactcctttgttcttagactgttaatgg
ggtatagacgtgggttgtggggtttctgtctttgtggtattcagattaat
tttgataccttaaaactcaccagagtcttctttgctctactttaaggtgg
aaatgtttgttgatataccagttgcagagttgaccaagttgaggggacaa
gaatgaaaagaaaacattttttcttctctaacattctatctatttaataa
acatggtgtctcttgtggttgtcctgatactctgtagacacggctggcct
tgatctccaagatccacctgcctctgcctcctggttgctaggattaaagg
catgtgctatcattacccagccttgattaattctcacaataaagaatgga
tttgaggggggtatggggggactt
gaattcaacaaaaacaggaacaccaatcaagttccaatcagaccaccatg
gattaaagctggaattcaacaaaaacaggaacaccagtcaagttccaatc
agcagctcacagattgggaaaggatcttcaccaaccctacatttcacaga
gggctcatatccagaatttacaaagaactcaagaagttagacactaacaa
cccaaataacccaattttaaaatggggtacagaactaaacagagaattct
taacagaggaatctcgaatggctgagaaacacttaaggaaatgttcaaag
tccttagttttcagggaaatataaatcaaaacaacttggaggttccatct
tacaccagtcagaatggctaagttcaaaaactcaagtgatagcacatgct
agcgaggatgtggaacaaggggaacactccttcattgatggtgggtttgc
aaacttgtacaaccactctggaaatcaatttggtggtttctcagaaaact
gggaatagttctatctcaagacccagctatgctactcctgggcatatacc
caaaagatgttccaacatcccacaaagacacttgcttaactgtgttcata
gcagccttattcataatagccagaaactggaaacaacctagatgtccctc
aactgaagaatgaataaataaaatgtggtacatatacacaatggaatact
attcagctactaaaaatcaagacatcgtgaattttgcaggcaaatagaac
ttgaaaatatcatgctgagtgaggtaactcagttcccaaatgacatgcat
gatatgtactcacttataagtggatattagcgatagaatataggcactat
gttatatgccacagacctcgaagaagctaaacaaaaaggaatgcacaatc
gaagaagcttgactttcacttagaaggggaataaaataatcataagaaag
cagtggggggagggactt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_18151531_18152818
seq2: B6Ng01-080F22.b_45_868

seq1  GAATTCCATTGCTTCCAGTCTTAGTGCATGAACTCAGAAATTAAGCCAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATTGCTTCCAGTCTTAGTGCATGAACTCAGAAATTAAGCCAGT  50

seq1  TTTACTGTAGAAGGCATGTCTTGTTCTGGCCACATGTGAGTTATGGCTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACTGTAGAAGGCATGTCTTGTTCTGGCCACATGTGAGTTATGGCTTC  100

seq1  CTAAGTATTCTAACACAAGGAGTAACTGAGCATTGCGATGATTCCTGGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGTATTCTAACACAAGGAGTAACTGAGCATTGCGATGATTCCTGGAT  150

seq1  AACGTGTGATTTTCTTTGTTAGACGGTTACTTTAGCCTTGAAGATTGTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGTGTGATTTTCTTTGTTAGACGGTTACTTTAGCCTTGAAGATTGTGT  200

seq1  TTCTTCCAGCTCTGTGACAATCTCAAGAACTTTGGTTGTGTGATAATGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCCAGCTCTGTGACAATCTCAAGAACTTTGGTTGTGTGATAATGTG  250

seq1  CTTTTTCTGTGAGATTGTTGAAATGAGATCGTCTCTATGATGAATTTCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTCTGTGAGATTGTTGAAATGAGATCGTCTCTATGATGAATTTCCT  300

seq1  TGGAACTGAAGCAAGCTATGATGCTCATATCTTTCTGTGTGTGTAATTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAACTGAAGCAAGCTATGATGCTCATATCTTTCTGTGTGTGTAATTCT  350

seq1  GGTGATGTTACACTCTTGACAGCCTTTCAGTTTTGTGAAAGAAGGTATTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGATGTTACACTCTTGACAGCCTTTCAGTTTTGTGAAAGAAGGTATTC  400

seq1  CTGGCTTGTTTGCTGTGTAGGACACTCCTTTGTTCTTAGACTGTTAATGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCTTGTTTGCTGTGTAGGACACTCCTTTGTTCTTAGACTGTTAATGG  450

seq1  GGTATAGACGTGGGTTGTGGGGTTTCTGTCTTTGTGGTATTCAGATTAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATAGACGTGGGTTGTGGGGTTTCTGTCTTTGTGGTATTCAGATTAAT  500

seq1  TTTGATACCTTAAAACTCACCAGAGTCTTCTTTGCTCTACTTTAAGGTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGATACCTTAAAACTCACCAGAGTCTTCTTTGCTCTACTTTAAGGTGG  550

seq1  AAATGTTTGTTGATATACCAGTTGCAGAGTTGACCAAGTTGAGGGGACAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTTTGTTGATATACCAGTTGCAGAGTTGACCAAGTTGAGGGGACAA  600

seq1  GAATGAAAAGAAAACATTTTTTCTTCTCTAACATTCTATCTATTTAATAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGAAAAGAAAACATTTTTTCTTCTCTAACATTCTATCTATTTAATAA  650

seq1  ACATGGTGTCTCTTGTGGTTGTCCTGATACTCTGTAGACACGGCTGGCCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGGTGTCTCTTGTGGTTGTCCTGATACTCTGTAGACACGGCTGGCCT  700

seq1  TGATCTCCAAGATCCACCTGCCTCTGCCTCCTGGTTGCTAGGATTAAAGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCTCCAAGATCCACCTGCCTCTGCCTCCTGGTTGCTAGGATTAAAGG  750

seq1  CATGTGCTATCATTACCCAGCCTTGATTAATTCTCACAATAAAGAATGGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTGCTATCATTACCCAGCCTTGATTAATTCTCACAATAAAGAATGGA  800

seq1  TTTGAGGGGGGTAT-GGGGGACTTTTGGGATAGCACTGGAAATGTAAATG  849
      |||||||||||||| |||||||||                          
seq2  TTTGAGGGGGGTATGGGGGGACTT--------------------------  824

seq1  AAGAAAATACCTAATTAAAATAAAATAAATTAATAAATTTCATCCTATTC  899
                                                        
seq2  --------------------------------------------------  824

seq1  ATCACAGTCTGATGAAAAAAAAAAAGAATGGATTTATTAAGTCTGAATGA  949
                                                        
seq2  --------------------------------------------------  824

seq1  ATTTGAATATTCCTAAAAAGTAATTTTTGATGAAGAGAATTATGAACTCT  999
                                                        
seq2  --------------------------------------------------  824

seq1  GGTGAAATTGCTTCCTTTAAACTTATTTTCTTTGGGGGCGGGAATAGGTG  1049
                                                        
seq2  --------------------------------------------------  824

seq1  TAGAAAGTCAACAATATTATTGGGTAAAAGAACATGCTGTCTTGGTGTGC  1099
                                                        
seq2  --------------------------------------------------  824

seq1  TTTCCACAGGGCAGCGCCTGTTAATATAGCTCAGAGTTAAGGATTTGCAG  1149
                                                        
seq2  --------------------------------------------------  824

seq1  TTGAATGCAGGTGTGAGCTTGCCTAGAGCCTCAACATGTTTTTCTCCTCT  1199
                                                        
seq2  --------------------------------------------------  824

seq1  TCTCATAACAGCAAATTTACTTTATTAGAGAATTGATCAATATACCACAG  1249
                                                        
seq2  --------------------------------------------------  824

seq1  ACTCAATTTCATAGTCAACTTAGGACAGGCTTAAGACTT  1288
                                             
seq2  ---------------------------------------  824