BAC Information

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BAC

Clone NameB6Ng01-081L05
Chromosome10 (Build37)6 (Build37)
Map Location 104,054,435 - 104,055,061107,107,488 - 107,108,481
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneEG627488, EG667692, EG667695, LOC100043292
Downstream geneLOC100042383, Tmtc2, EG627573
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-081L05.bB6Ng01-081L05.g
ACCDH896471DH896472
length1,009994
definitionDH896471|Mus musculus domesticus DNA, BAC clone: B6Ng01-081L05, 5' end.DH896472|Mus musculus domesticus DNA, BAC clone: B6Ng01-081L05, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(104,054,435 - 104,055,061)(107,107,488 - 107,108,481)
sequence
gaattctgcttctggtttccttttgaaaagttaactttgggaactagaga
gatgactcagttctcagtgatccagagaacccaagcacaatacaaggtac
aggcagtttgtacccataagtccaccctctggaatttgttggagaaacac
agatccctagagactgctgaccaaccaatctagctgaaacagctctaagt
ttaaagagagaccaggtcttagaaaagtgtagaaaaatacagagagcaac
agtagaagacacctaatggtgacttctgaacatccatacatagatgtgca
catccatgtacacacacacataaatgcataaatgtagtagtcatcattaa
ctaataaactcaaataaaatgtttaaaggttgctctcaaattcatctgga
ataacaaaaaaacctaggatagcaaaaactcttcccaatgataaaagaac
ctctggtggaatcaccatgcctgacctaagctgtactacagagcaattgg
gataaaaactgcatggtactggtatagcaacagacaagtagaacaatgga
atagaattgaaaacccagaaatgaacccacacacctatggtcacttgatc
tttgacaagggagctaaaaccatccagtggaaaaaagacagcattttcaa
caaatggtgctggcacaactggtggttatcatgtagaagaatgcgaattg
atccattcctatctccttgtactaaggtcaaatctaagtggattaaggaa
ctccacataaaaccagagacactgaaacttttagaggagaaagaggggaa
aagcctcgaagagatgggcaccggggaaaattctttaatagaacagcaat
ggcttgtgctgtaacatcgagaattgacaattgggacttcattaaaattg
caaagcttgtgtaaggcaaagacactgtcaatagacaaaaaggccaccaa
cagattaggaaaggatctttacctatcctgactcagatagggactaatat
ccatatata
gaattctcttgacagtttcagtggaattggttggaaagtatatgattata
taatctataggctatgattcattctacaaatatgtgtcttacatttatgc
catgtttgtgctagaaaattaacttgaactttcaaaaattatgttaaaat
tgtgagaacagttttactgaccctttcattgtctttattttttattttaa
ttttagttatgtgtgtgggagacaggcatgtactcatgagtattgaaaag
agggcatcacatcccttggatctgacattacaggctgctgtgagctgcct
gttattggagctagaatctaactagggtcctctgcatgagcagtttatgc
acataaccactcaggcatctcaccaaactcctgttataatttgtatttta
atagcaatatcaatttagtagaattagtctttattttcattaaatattcc
ataatgtttatctcacttcactctgagttttctttgttttgaaattaaga
ccaggtattgaacttttttcaggtgttgaattttcttttgataatttatt
agcaggttttctaaaatttattcggtattttcttcatttacatttcaaat
gctatcccaaaagtcccccatacctcccccctcttcccctacccacccac
tcctacttcatggccctggcgttcccctgtatgaggcatataaagttttg
caagtcaaatgggtctctctttccaatgatggccaactaggccatctttc
tgatacatatgcagctagagacatgagctccagggggtactggtttagtt
catattgttcttccacctatagggttgcagaccccttttagctccttggg
tactttctctagctcctccattggggaccctgtgatccatccaatagctg
actgtgagcatcactctgtgtttgctaggccccagcatagcctcacagag
cagctatatcaaggttctttcagcaaatcttgcttagtgtatgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_104054435_104055061
seq2: B6Ng01-081L05.b_433_1052 (reverse)

seq1  TATATATGTTGGATATTAGTCCCCTATCTGAATTAGGATAGGTAAAGATC  50
      ||||||   ||||||||||| |||||||||| | ||||||||||||||||
seq2  TATATA---TGGATATTAGT-CCCTATCTGAGTCAGGATAGGTAAAGATC  46

seq1  CTTTCTCAATCTGTTGGTGGTCTTTTTGTCTTATTGACGGTGTCTTTTGC  100
      |||||  ||||||||||||| ||||||||| ||||||| ||||| |||||
seq2  CTTTCCTAATCTGTTGGTGGCCTTTTTGTC-TATTGACAGTGTC-TTTGC  94

seq1  CTTGCAGAAGCTTTGCAATTTT-ATGAGGTCCCATTTATCAACTCTCTAT  149
      ||| || ||||||||||||||| |||| |||||| || |||| |||| ||
seq2  CTTACACAAGCTTTGCAATTTTAATGAAGTCCCAATTGTCAATTCTCGAT  144

seq1  CTTACAGCACAAGCCATTGCTGTTCTATTCAGGAATTTTTCCCCTGTACC  199
       |||||||||||||||||||||||||||| | ||| |||||||| || ||
seq2  GTTACAGCACAAGCCATTGCTGTTCTATTAAAGAA-TTTTCCCCGGTGCC  193

seq1  CATATCTTCGAGGCTTTTCCCTACTTTTTCCTCTATAAGTTTCAGTGTCT  249
      ||| |||||||||||||||||  |||| ||||||| ||||||||||||||
seq2  CATCTCTTCGAGGCTTTTCCCCTCTTTCTCCTCTAAAAGTTTCAGTGTCT  243

seq1  CTGGTTTTATGTGGAGTTCCTTAATCCACTTAGATTTTACCTTAGTACAA  299
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  CTGGTTTTATGTGGAGTTCCTTAATCCACTTAGATTTGACCTTAGTACAA  293

seq1  GGAGATAGTAATTGATCAATTCACAATCTTCTACATGATAACAGCCAGTT  349
      |||||||| ||| ||||||||| || ||||||||||||||||  ||||||
seq2  GGAGATAGGAATGGATCAATTCGCATTCTTCTACATGATAACCACCAGTT  343

seq1  GTGCCAGCATGATTTGTTGAAAATGCTGTCTTTTTTTCCACTGGATAGTT  399
      |||||||||  ||||||||||||||||||| ||||||||||||||| |||
seq2  GTGCCAGCACCATTTGTTGAAAATGCTGTC-TTTTTTCCACTGGATGGTT  392

seq1  TTAGCTCCCTTGTCAAAGATCAAGTGACCATAGGTGTGTGGGTTCATCTC  449
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TTAGCTCCCTTGTCAAAGATCAAGTGACCATAGGTGTGTGGGTTCATTTC  442

seq1  TGGATCTTCAATTCTGTTCCATTGGTCTACTTGTCTGTCGCTATACAAGT  499
      ||| | ||||||||| |||||||| ||||||||||||| ||||||| |||
seq2  TGGGTTTTCAATTCTATTCCATTGTTCTACTTGTCTGTTGCTATACCAGT  492

seq1  ACCATGCAGTTTTTATCACAATTGCTCTGTAGTACAGTTTTAGGTCCGGG  549
      ||||||||||||||||| |||||||||||||||||||  ||||||| || 
seq2  ACCATGCAGTTTTTATCCCAATTGCTCTGTAGTACAG-CTTAGGTCAGGC  541

seq1  ATGGTGATTCCACCAGAGGTTCTTTTATCCTTGAGAAGAGTTTTTGCTAT  599
      ||||||||||||||||||||||||||||| ||| ||||||||||||||||
seq2  ATGGTGATTCCACCAGAGGTTCTTTTATCATTGGGAAGAGTTTTTGCTAT  591

seq1  CCTAGG-TTTTTTGTTATTCCAGATGAAT  627
      |||||| ||||||||||||||||||||||
seq2  CCTAGGTTTTTTTGTTATTCCAGATGAAT  620

seq1: chr6_107107488_107108481
seq2: B6Ng01-081L05.g_69_1062

seq1  GAATTCTCTTGACAGTTTCAGTGGAATTGGTTGGAAAGTATATGATTATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTTGACAGTTTCAGTGGAATTGGTTGGAAAGTATATGATTATA  50

seq1  TAATCTATAGGCTATGATTCATTCTACAAATATGTGTCTTACATTTATGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCTATAGGCTATGATTCATTCTACAAATATGTGTCTTACATTTATGC  100

seq1  CATGTTTGTGCTAGAAAATTAACTTGAACTTTCAAAAATTATGTTAAAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTTTGTGCTAGAAAATTAACTTGAACTTTCAAAAATTATGTTAAAAT  150

seq1  TGTGAGAACAGTTTTACTGACCCTTTCATTGTCTTTATTTTTTATTTTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAGAACAGTTTTACTGACCCTTTCATTGTCTTTATTTTTTATTTTAA  200

seq1  TTTTAGTTATGTGTGTGGGAGACAGGCATGTACTCATGAGTATTGAAAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAGTTATGTGTGTGGGAGACAGGCATGTACTCATGAGTATTGAAAAG  250

seq1  AGGGCATCACATCCCTTGGATCTGACATTACAGGCTGCTGTGAGCTGCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCATCACATCCCTTGGATCTGACATTACAGGCTGCTGTGAGCTGCCT  300

seq1  GTTATTGGAGCTAGAATCTAACTAGGGTCCTCTGCATGAGCAGTTTATGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATTGGAGCTAGAATCTAACTAGGGTCCTCTGCATGAGCAGTTTATGC  350

seq1  ACATAACCACTCAGGCATCTCACCAAACTCCTGTTATAATTTGTATTTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAACCACTCAGGCATCTCACCAAACTCCTGTTATAATTTGTATTTTA  400

seq1  ATAGCAATATCAATTTAGTAGAATTAGTCTTTATTTTCATTAAATATTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCAATATCAATTTAGTAGAATTAGTCTTTATTTTCATTAAATATTCC  450

seq1  ATAATGTTTATCTCACTTCACTCTGAGTTTTCTTTGTTTTGAAATTAAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATGTTTATCTCACTTCACTCTGAGTTTTCTTTGTTTTGAAATTAAGA  500

seq1  CCAGGTATTGAACTTTTTTCAGGTGTTGAATTTTCTTTTGATAATTTATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGTATTGAACTTTTTTCAGGTGTTGAATTTTCTTTTGATAATTTATT  550

seq1  AGCAGGTTTTCTAAAATTTATTCGGTATTTTCTTCATTTACATTTCAAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGGTTTTCTAAAATTTATTCGGTATTTTCTTCATTTACATTTCAAAT  600

seq1  GCTATCCCAAAAGTCCCCCATACCTCCCCCCTCTTCCCCTACCCACCCAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATCCCAAAAGTCCCCCATACCTCCCCCCTCTTCCCCTACCCACCCAC  650

seq1  TCCTACTTCATGGCCCTGGCGTTCCCCTGTATGAGGCATATAAAG-TTTG  699
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  TCCTACTTCATGGCCCTGGCGTTCCCCTGTATGAGGCATATAAAGTTTTG  700

seq1  CAAGTCAAATGGGTCTCTCTTTCCAATGATGGCCAACTAGGCCATC-TTC  748
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  CAAGTCAAATGGGTCTCTCTTTCCAATGATGGCCAACTAGGCCATCTTTC  750

seq1  TGATACATATGCAGCTAGAGACATGAGCTCCAGGGGGTACTGG-TTAGTT  797
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TGATACATATGCAGCTAGAGACATGAGCTCCAGGGGGTACTGGTTTAGTT  800

seq1  CATATTGTTCTTCCACCTATAGGGTTGCAGACCCC-TTTAGCTCCTTGGG  846
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  CATATTGTTCTTCCACCTATAGGGTTGCAGACCCCTTTTAGCTCCTTGGG  850

seq1  TACTTTCTCTAGCTCCTCCATTGGGGACCCTGTGATCCATCCAATAGCTG  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTCTCTAGCTCCTCCATTGGGGACCCTGTGATCCATCCAATAGCTG  900

seq1  ACTGTGAGCATCCACTTCTGTGTTTGCTAGGCCCCAGCATAGCCTCACAA  946
      ||||||||||| ||| |||||||||||||||||||||||||||||||| |
seq2  ACTGTGAGCAT-CAC-TCTGTGTTTGCTAGGCCCCAGCATAGCCTCAC-A  947

seq1  GAGACAGCTATATCAGGGTCCTTTCAGCAAAATCTTGC-TAGTGTATGC  994
      ||| ||||||||||| ||| |||||||| ||||||||| ||||||||||
seq2  GAG-CAGCTATATCAAGGTTCTTTCAGC-AAATCTTGCTTAGTGTATGC  994