BAC Information

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BAC

Clone NameB6Ng01-082B19
Chromosome10 (Build37)
Map Location 34,591,481 - 34,727,326
singlet/doubletdoublet
Overlap geneLOC667824
Upstream geneSult3a1, Rshl3, 2700019D07Rik, LOC672399, LOC666127, Rwdd1, 4732454E20Rik, BB146404, A630077B13Rik, Dse, Tspyl1, Tspyl4, Nt5dc1, Col10a1, Frk
Downstream geneLOC100041585
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-082B19.bB6Ng01-082B19.g
ACCDH896764DH896765
length1,1941,148
definitionDH896764|Mus musculus domesticus DNA, BAC clone: B6Ng01-082B19, 5' end.DH896765|Mus musculus domesticus DNA, BAC clone: B6Ng01-082B19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(34,726,108 - 34,727,326)(34,591,481 - 34,592,645)
sequence
gaattcaaagtatattctaaccaacattctgaaaggaaaatcctctaatt
tcccctaaattattgtcccattagtcagttggtcaatctcttttaaactg
taaggtaggattctttccaagaatttcagaatgaggtgttaagtctaata
ctccagatcagaagtgacatctagttataaaaacaattaagaaaggtgca
taattttcaatgatgcttcagcatcccaaaaatggttaacaccagagaac
tgactctggtaaaatatatggtagtgtgtagaagttgctgactttcaggt
taatttttgcagcaattctggagaaataatcaattctgtgctgaagttag
gaacaatacaatatggctgccattagcaggaacataacatagaacataaa
atcatattctaaatgtgactactgctttgaactctaattttatgacaggc
tagctgtacaatttgatgcaagttttgaactgaacataattttaatcatt
catatatatatacatatatataatcaggatataacgccattttaaacaat
gcttattagtagtatttatggtagcatatgataaatagaaatcactaaat
aattgttggttattattattttttactactactactgctgctgctgctgc
tattatgatttatgtaccacttagtttgtacaaagtactctgctatgtgt
cttttatataatttctatgataatattcatgcaagaaataaaatacctaa
tcagtaatgcactaataactaaatgcatagttatccttagtgtccagtgg
tggtgattaagattaaaagatattcgataattttacaaggcttctgcact
tatgaggttacaaccaagatctgaaggggattttgtaacagaatctgaac
tcttcatcattattctctttctctttgagcagcctattaattaaattaaa
ttggcttaatgagaagtgcatgtcccattttactttaagataaagaatgg
acggcattgtaagaaatgtaaactccttctcagtatgttctattatctaa
acttttattaattatttcttttaggcatgttatctacctaaaggttctga
actctaggatcgttagcaatctacaaggataactcgaagtctacttctgt
tgtctgaactagattccttatttagtccatcattctgtcataac
gaattcagccctctaaatggcggtttactgcaaggttaattacctatgag
ttagaaaatgcagcctttatgttgatactaaaagcagagttagctgccta
cattgggtatctctgcagaaactaattttcaccaaaaatgtgaattttag
agcaagtttgagtactgtgtaatttattgctgttgatagactggtctaca
atggcaccccctaaatcatatttaatgggatacaatctatgttttcaaca
cgtggattttttttattcatagagaggatgtatcatgataaatattatct
cagagtagtggtttggttgttaggacgacacgcatgtgacagtactaacg
tttcaattatccacttgcatcaatcaatcttttcgttttcgacactgttg
cctgcagtaatgtcacagcttttctgtcagacaggagaactttgcgggaa
atgttattcattacagctgcaaatctgtcactgtgcctggcatggcttgt
taatgacaacatttatttcaaagagccatgtttcgctttgtttcaggaga
gttgactctgtgatcgtaaagtctaatgaaatgccaaaaagatgaagtga
gcaagttttccaaaaatacacgaaagtgatccaaatccgtttcgaaaaag
gaacaagagattggcattcctattttcatggccttacccgcatccacaaa
cgagctctctcgggagccaggggcttttgcttgggtattacagcaggaaa
acagcaaacaccatttttttgtcactgctgtatggttttgggttcttcag
ccaagcttggatgcaacaggaaacatttagtgttgtgtttccttctgaaa
accttttgtggaagatggataatgtcttatggctatgcataatgacacgg
tgaaaacaaattttcttaatttacatttggtgtttttagacatcattgga
gaaatatatggattttcaaagtgagtatgtaaaaaataatataaatgaaa
gttatagctcatttaaataaaatgtcatttctggcttttttatattatag
atggaacaccaattatagagtcatgttaactctgccacctctgttagcag
catgaaacttcaaaccatgggttgttatctagctactggaagtgacag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_34726108_34727326
seq2: B6Ng01-082B19.b_43_1236 (reverse)

seq1  GTTATGACAGAA-AATGGATTGGAGTTAGAAGATAAAGGGAGATCTAAAG  49
      ||||||||||||  ||||| |         | ||||  ||| ||||  ||
seq2  GTTATGACAGAATGATGGACT---------AAATAA--GGA-ATCT--AG  36

seq1  TTGTCAGACAACCAGAAGTAGACTTCTGAGTTTAATCTTTGTAGATATGC  99
      |  |||||||| |||||||||||||| |||||  ||| |||||||| |||
seq2  T--TCAGACAA-CAGAAGTAGACTTC-GAGTT--ATCCTTGTAGAT-TGC  79

seq1  TAACGATCCTTAGAGTTCAGAA-CTTTAGGTAGATATACATGCCTTAAAA  148
      ||||||||| |||||||||||| ||||||||||||| ||||||| |||||
seq2  TAACGATCC-TAGAGTTCAGAACCTTTAGGTAGATA-ACATGCC-TAAAA  126

seq1  GAAATAA-TAATAAAAGTTTTAGATAATAGAACATACTGAG-AGGAGTTT  196
      ||||||| ||||||||| ||||||||||||||||||||||| ||||||||
seq2  GAAATAATTAATAAAAG-TTTAGATAATAGAACATACTGAGAAGGAGTTT  175

seq1  ACATTTCTTTACAATGCCGTCCATTCTTTATCTTAAAGTAAAAATGGGGA  246
      ||||||| |||||||||||||||||||||||||||||||||||   ||||
seq2  ACATTTC-TTACAATGCCGTCCATTCTTTATCTTAAAGTAAAA--TGGGA  222

seq1  CATGCACTTCTCATTAAGCCAATTTAATTTAATTAATAGGCTGCTCAAAA  296
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  CATGCACTTCTCATTAAGCCAATTTAATTTAATTAATAGGCTGCTC-AAA  271

seq1  GAGAAAGAGAATAATGATGAAGAGTTCAGATTCTGTTACAAAATCCCCTT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAAGAGAATAATGATGAAGAGTTCAGATTCTGTTACAAAATCCCCTT  321

seq1  CAGATCTTGGTTGTAACCTCATAAGTGCAGAAGCCTTGTAAAATTATCGA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATCTTGGTTGTAACCTCATAAGTGCAGAAGCCTTGTAAAATTATCGA  371

seq1  ATATCTTTTAATCTTAATCACCACCACTGGACACTAAGGATAACTATGCA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCTTTTAATCTTAATCACCACCACTGGACACTAAGGATAACTATGCA  421

seq1  TTTAGTTATTAGTGCATTACTGATTAGGTATTTTATTTCTTGCATGAATA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGTTATTAGTGCATTACTGATTAGGTATTTTATTTCTTGCATGAATA  471

seq1  TTATCATAGAAATTATATAAAAGACACATAGCAGAGTACTTTGTACAAAC  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCATAGAAATTATATAAAAGACACATAGCAGAGTACTTTGTACAAAC  521

seq1  TAAGTGGTACATAAATCATAATAGCAGCAGCAGCAGCAGTAGTAGTAGTA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTGGTACATAAATCATAATAGCAGCAGCAGCAGCAGTAGTAGTAGTA  571

seq1  AAAAATAATAATAACCAACAATTATTTAGTGATTTCTATTTATCATATGC  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATAATAATAACCAACAATTATTTAGTGATTTCTATTTATCATATGC  621

seq1  TACCATAAATACTACTAATAAGCATTGTTTAAAATGGCGTTATATCCTGA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCATAAATACTACTAATAAGCATTGTTTAAAATGGCGTTATATCCTGA  671

seq1  TTATATATATGTATATATATATGAATGATTAAAATTATGTTCAGTTCAAA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATATATGTATATATATATGAATGATTAAAATTATGTTCAGTTCAAA  721

seq1  ACTTGCATCAAATTGTACAGCTAGCCTGTCATAAAATTAGAGTTCAAAGC  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGCATCAAATTGTACAGCTAGCCTGTCATAAAATTAGAGTTCAAAGC  771

seq1  AGTAGTCACATTTAGAATATGATTTTATGTTCTATGTTATGTTCCTGCTA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGTCACATTTAGAATATGATTTTATGTTCTATGTTATGTTCCTGCTA  821

seq1  ATGGCAGCCATATTGTATTGTTCCTAACTTCAGCACAGAATTGATTATTT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCAGCCATATTGTATTGTTCCTAACTTCAGCACAGAATTGATTATTT  871

seq1  CTCCAGAATTGCTGCAAAAATTAACCTGAAAGTCAGCAACTTCTACACAC  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAGAATTGCTGCAAAAATTAACCTGAAAGTCAGCAACTTCTACACAC  921

seq1  TACCATATATTTTACCAGAGTCAGTTCTCTGGTGTTAACCATTTTTGGGA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCATATATTTTACCAGAGTCAGTTCTCTGGTGTTAACCATTTTTGGGA  971

seq1  TGCTGAAGCATCATTGAAAATTATGCACCTTTCTTAATTGTTTTTATAAC  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGAAGCATCATTGAAAATTATGCACCTTTCTTAATTGTTTTTATAAC  1021

seq1  TAGATGTCACTTCTGATCTGGAGTATTAGACTTAACACCTCATTCTGAAA  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATGTCACTTCTGATCTGGAGTATTAGACTTAACACCTCATTCTGAAA  1071

seq1  TTCTTGGAAAGAATCCTACCTTACAGTTTAAAAGAGATTGACCAACTGAC  1146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTGGAAAGAATCCTACCTTACAGTTTAAAAGAGATTGACCAACTGAC  1121

seq1  TAATGGGACAATAATTTAGGGGAAATTAGAGGATTTTCCTTTCAGAATGT  1196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGGGACAATAATTTAGGGGAAATTAGAGGATTTTCCTTTCAGAATGT  1171

seq1  TGGTTAGAATATACTTTGAATTC  1219
      |||||||||||||||||||||||
seq2  TGGTTAGAATATACTTTGAATTC  1194

seq1: chr10_34591481_34592645
seq2: B6Ng01-082B19.g_67_1214

seq1  GAATTCAGCCCTCTAAATGGCGGTTTACTGCAAGGTTAATTACCTATGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCCCTCTAAATGGCGGTTTACTGCAAGGTTAATTACCTATGAG  50

seq1  TTAGAAAATGCAGCCTTTATGTTGATACTAAAAGCAGAGTTAGCTGCCTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAAAATGCAGCCTTTATGTTGATACTAAAAGCAGAGTTAGCTGCCTA  100

seq1  CATTGGGTATCTCTGCAGAAACTAATTTTCACCAAAAATGTGAATTTTAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGGGTATCTCTGCAGAAACTAATTTTCACCAAAAATGTGAATTTTAG  150

seq1  AGCAAGTTTGAGTACTGTGTAATTTATTGCTGTTGATAGACTGGTCTACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAGTTTGAGTACTGTGTAATTTATTGCTGTTGATAGACTGGTCTACA  200

seq1  ATGGCACCCCCTAAATCATATTTAATGGGATACAATCTATGTTTTCAACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCACCCCCTAAATCATATTTAATGGGATACAATCTATGTTTTCAACA  250

seq1  CGTGGATTTTTTTTATTCATAGAGAGGATGTATCATGATAAATATTATCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGGATTTTTTTTATTCATAGAGAGGATGTATCATGATAAATATTATCT  300

seq1  CAGAGTAGTGGTTTGGTTGTTAGGACGACACGCATGTGACAGTACTAACG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGTAGTGGTTTGGTTGTTAGGACGACACGCATGTGACAGTACTAACG  350

seq1  TTTCAATTATCCACTTGCATCAATCAATCTTTTCGTTTTCGACACTGTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAATTATCCACTTGCATCAATCAATCTTTTCGTTTTCGACACTGTTG  400

seq1  CCTGCAGTAATGTCACAGCTTTTCTGTCAGACAGGAGAACTTTGCGGGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCAGTAATGTCACAGCTTTTCTGTCAGACAGGAGAACTTTGCGGGAA  450

seq1  ATGTTATTCATTACAGCTGCAAATCTGTCACTGTGCCTGGCATGGCTTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTATTCATTACAGCTGCAAATCTGTCACTGTGCCTGGCATGGCTTGT  500

seq1  TAATGACAACATTTATTTCAAAGAGCCATGTTTCGCTTTGTTTCAGGAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGACAACATTTATTTCAAAGAGCCATGTTTCGCTTTGTTTCAGGAGA  550

seq1  GTTGACTCTGTGATCGTAAAGTCTAATGAAATGCCAAAAAGATGAAGTGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGACTCTGTGATCGTAAAGTCTAATGAAATGCCAAAAAGATGAAGTGA  600

seq1  GCAAGTTTTCCAAAAATACACGAAAGTGATCCAAATCCGTTTCGAAAAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGTTTTCCAAAAATACACGAAAGTGATCCAAATCCGTTTCGAAAAAG  650

seq1  GAACAAGAGATTGGCATTCCTATTTTCATGGCCTTACCCGCATCCACAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAAGAGATTGGCATTCCTATTTTCATGGCCTTACCCGCATCCACAAA  700

seq1  CGAGCTCTCTCGGGAGCCAGGGGCTTTTGCTTGGGTATTACAGCAGGAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGCTCTCTCGGGAGCCAGGGGCTTTTGCTTGGGTATTACAGCAGGAAA  750

seq1  ACAGCAAACACCATTTTTTTGTCACTGCTGTATGGTTTTGGGTTCTTCAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCAAACACCATTTTTTTGTCACTGCTGTATGGTTTTGGGTTCTTCAG  800

seq1  CCAAGCTTGGATGCAACAGGAAACATTTAGTGTTGTGTTTCCTTCTGAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGCTTGGATGCAACAGGAAACATTTAGTGTTGTGTTTCCTTCTGAAA  850

seq1  ACCTTTTGTGGAAGATGGATAATGTCTTATGGCTATGCATAATGACACGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTTTGTGGAAGATGGATAATGTCTTATGGCTATGCATAATGACACGG  900

seq1  TGAAAACAAATTTTCTTAATTTACATTTGGTGTTTTTAGACATCATTGGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAACAAATTTTCTTAATTTACATTTGGTGTTTTTAGACATCATTGGA  950

seq1  GAAAATAATATGGATTTTCAAAGTGAGTAATGTAAAAAATAATAATAAAT  1000
      ||||   ||||||||||||||||||||| |||||||||||||| ||||||
seq2  GAAA--TATATGGATTTTCAAAGTGAGT-ATGTAAAAAATAAT-ATAAAT  996

seq1  GAAAAGTTATAGCTCAATTTAAATAAAAATGTCAATTTCTGGCTTTTTTA  1050
      | ||||||||||||| |||||||| |||||||| ||||||||||||||||
seq2  G-AAAGTTATAGCTC-ATTTAAAT-AAAATGTC-ATTTCTGGCTTTTTTA  1042

seq1  TA-TATAGATGGAACACAAATTATTAGAAGTCAATGTAACTCTGCCA-CT  1098
      || |||||||||||||| ||||| ||| |||||   ||||||||||| ||
seq2  TATTATAGATGGAACACCAATTA-TAG-AGTCATGTTAACTCTGCCACCT  1090

seq1  CTGTAAAGCAGGCAAATTGAAAAACTCAAAACCAT-GGTTGTTATCTTAG  1147
      ||||  |||| |||   ||  |||||  ||||||| |||||||||| |||
seq2  CTGT-TAGCA-GCA---TG--AAACTTCAAACCATGGGTTGTTATC-TAG  1132

seq1  CCTACCTGGAAGTGACAG  1165
       ||| |||||||||||||
seq2  -CTA-CTGGAAGTGACAG  1148