BAC Information

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BAC

Clone NameB6Ng01-082C22
Chromosome10 (Build37)
Map Location 25,568,825 - 25,569,873
singlet/doubletsinglet
Overlap genenone
Upstream geneCrsp3, Arg1, EG667479, LOC212399, Akap7, LOC665800, Epb4.1l2, 2010003K15Rik, EG667513, LOC667519, LOC628697
Downstream geneC030003D03Rik, LOC100040851, LOC15352, Samd3, L3mbtl3, LOC435208, LOC667572, LOC100040349, Arhgap18
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-082C22.g
ACCDH896818
length1,049
definitionDH896818|Mus musculus domesticus DNA, BAC clone: B6Ng01-082C22, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcatgtcaagtagacacacccttaaggagtcacaaaaggatgcttt
tcagactgacaaccagaaaagaaaatatctttgagcatcagaaggaacag
agagagcatgtgtacccatagagaaccatcctttccctcatgagtttgac
aattgaaacaagatacataacaccgtctgatagcccgggaagtgataccc
aaaactggaaaagagagggagacataaatagaagaaagagttctacaaca
ttcaattcagatagcccaaagggagcaagaaaggagaaacagaagacaag
acacagagaaaccaaacaagcaaaataaatcagtgacaggctttattgct
tatcactaattgctttaaatgcagtcttcgtaaccagtcaacaagggtag
gggcaggagcaagtgggtgatagatggagatgcttacaaaagacaacata
ggagaccaatgcattgatgttagaactgaccagttctcgaacttacacag
taaaagaactggagagaattttcgacataaacagaggaatgtaagcatgc
ccaggaaaatctcaaaaacagaggccactgtgtgtgccaccatgtccact
acagtttcacattacagccttcctgagtgcttccgttggaggaacccggg
caaaaatgtaaagagtctatcattatttgctaaaattacatttgaatctg
taagtatctgaattcagaatgttcaactgagaaagatgtctctggggttg
aaggatttatctgagagggagagtgctagccttgaaagtgtagagatcta
ggttcctaaccagcactgagaaaaaaaatccattttaatgacaattactt
tatcattttaactcggtgataattatctaggttgttgcttatgttcacga
acttgaaagaatttactaaattaataagaaatggtaataaaattgtattc
tttgcacatagatggaacaacctattctttaattcagaaagccagtagtt
gtgctgtttcgctttgctgtggctggagtgtatttacttccttcgggat
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_25568825_25569873
seq2: B6Ng01-082C22.g_71_1119 (reverse)

seq1  ATCCAGAAGGAAGTAAATACACTCCAG-CACAGCAAAGCGAAACAGCACA  49
      |||| |||||||||||||||||||||| ||||||||||||||||||||||
seq2  ATCCCGAAGGAAGTAAATACACTCCAGCCACAGCAAAGCGAAACAGCACA  50

seq1  ACCTACCTGGCTTTTCTGATTTAAAGAATAGGTTTGTTCATCTATGTGGC  99
      | ||| ||||| ||||||| ||||||||||||||  | ||||||||| ||
seq2  A-CTA-CTGGC-TTTCTGAATTAAAGAATAGGTTGTTCCATCTATGT-GC  96

seq1  AAGAAATACAATTTTATTTACATTTC-TATT-ATTTAGTAAATTCCTTCA  147
      ||  ||||||||||||||  |||||| |||| ||||||||||||| ||||
seq2  AAAGAATACAATTTTATTACCATTTCTTATTAATTTAGTAAATTCTTTCA  146

seq1  AGTTCGTGGAACATAAGCAACAACCTAGATAATTATCACGAGGTTAAAAT  197
      ||||||| |||||||||||||||||||||||||||||||   ||||||||
seq2  AGTTCGT-GAACATAAGCAACAACCTAGATAATTATCACCGAGTTAAAAT  195

seq1  GATAAAGTAATTGTCATTAAAATGGATTTTTTTTCTCAGTGCTGGTTAGG  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAAGTAATTGTCATTAAAATGGATTTTTTTTCTCAGTGCTGGTTAGG  245

seq1  AACCTAGATCTCTACACTTTCAAGGCTAGCACTCTCCCTCTCAGATAAAT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTAGATCTCTACACTTTCAAGGCTAGCACTCTCCCTCTCAGATAAAT  295

seq1  CCTTCAACCCCAGAGACATCTTTCTCAGTTG-ACATTCTG-ATTCAGATA  345
      ||||||||||||||||||||||||||||||| |||||||| |||||||||
seq2  CCTTCAACCCCAGAGACATCTTTCTCAGTTGAACATTCTGAATTCAGATA  345

seq1  CTTACAGATTCAAATGTAATTTTAGCAAATAATGATAGACTCTTTACATT  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACAGATTCAAATGTAATTTTAGCAAATAATGATAGACTCTTTACATT  395

seq1  TTTGCCCGGGTTCCTCCAACGGAAGCACTCAGGAAGGCTGTAATGTGAAA  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCCCGGGTTCCTCCAACGGAAGCACTCAGGAAGGCTGTAATGTGAAA  445

seq1  CTGTAGTGGACATGGTGGCACACACAGTGGCCTCTGTTTTTGAGATTTTC  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAGTGGACATGGTGGCACACACAGTGGCCTCTGTTTTTGAGATTTTC  495

seq1  CTGGGCATGCTTACATTCCTCTGTTTATGTCGAAAATTCTCTCCAGTTCT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGCATGCTTACATTCCTCTGTTTATGTCGAAAATTCTCTCCAGTTCT  545

seq1  TTTACTGTGTAAGTTCGAGAACTGGTCAGTTCTAACATCAATGCATTGGT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACTGTGTAAGTTCGAGAACTGGTCAGTTCTAACATCAATGCATTGGT  595

seq1  CTCCTATGTTGTCTTTTGTAAGCATCTCCATCTATCACCCACTTGCTCCT  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTATGTTGTCTTTTGTAAGCATCTCCATCTATCACCCACTTGCTCCT  645

seq1  GCCCCTACCCTTGTTGACTGGTTACGAAGACTGCATTTAAAGCAATTAGT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCTACCCTTGTTGACTGGTTACGAAGACTGCATTTAAAGCAATTAGT  695

seq1  GATAAGCAATAAAGCCTGTCACTGATTTATTTTGCTTGTTTGGTTTCTCT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAGCAATAAAGCCTGTCACTGATTTATTTTGCTTGTTTGGTTTCTCT  745

seq1  GTGTCTTGTCTTCTGTTTCTCCTTTCTTGCTCCCTTTGGGCTATCTGAAT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCTTGTCTTCTGTTTCTCCTTTCTTGCTCCCTTTGGGCTATCTGAAT  795

seq1  TGAATGTTGTAGAACTCTTTCTTCTATTTATGTCTCCCTCTCTTTTCCAG  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATGTTGTAGAACTCTTTCTTCTATTTATGTCTCCCTCTCTTTTCCAG  845

seq1  TTTTGGGTATCACTTCCCGGGCTATCAGACGGTGTTATGTATCTTGTTTC  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGGGTATCACTTCCCGGGCTATCAGACGGTGTTATGTATCTTGTTTC  895

seq1  AATTGTCAAACTCATGAGGGAAAGGATGGTTCTCTATGGGTACACATGCT  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGTCAAACTCATGAGGGAAAGGATGGTTCTCTATGGGTACACATGCT  945

seq1  CTCTCTGTTCCTTCTGATGCTCAAAGATATTTTCTTTTCTGGTTGTCAGT  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTGTTCCTTCTGATGCTCAAAGATATTTTCTTTTCTGGTTGTCAGT  995

seq1  CTGAAAAGCATCCTTTTGTGACTCCTTAAGGGTGTGTCTACTTGACATGA  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAAAGCATCCTTTTGTGACTCCTTAAGGGTGTGTCTACTTGACATGA  1045

seq1  ATTC  1049
      ||||
seq2  ATTC  1049