BAC Information

Click to search

BAC

Clone NameB6Ng01-082I21
Chromosome10 (Build37)
Map Location 94,964,943 - 94,965,947
singlet/doubletsinglet
Overlap genenone
Upstream geneTmcc3, EG667315, 4921537D05Rik, Plxnc1, Cradd, Socs2, LOC100042004, D10Ertd322e
Downstream geneUbe2n, Nudt4, EG628119, Eea1, EG432491, LOC667380
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-082I21.bB6Ng01-082I21.g
ACCDH897076DH897077
length1,0311,006
definitionDH897076|Mus musculus domesticus DNA, BAC clone: B6Ng01-082I21, 5' end.DH897077|Mus musculus domesticus DNA, BAC clone: B6Ng01-082I21, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcagatctgcagtgttgcagggcaggagagtatgctgaaagtaaag
gtgggatgatcacaatggtactacacttgataccactgacctgtgcgcca
acagtggttggcatagggtagttatgtcacatgagggctggggttgagcc
ccagagggtagagtgctctcctggtgggcacaaagccctgggttgaatat
ctaatgcataaaccccaggtgcagtgatatatatctgtaatcctagcact
tgagaagtagaggcaggagactggaagttcagggtcattctaggctagtt
tctagtcagcttgagatatgtgagaccctatagagatatattagacagac
agacagacagctgatagatagatagatagatagatagatagatagataga
tagatagatcgatgatagatagatagatagatagatagatagatagatag
atagatagacagacaggcagatgatagacagatgtcagaattgtctttcc
atttgctcctgagcgatctgatgactacatgctgccacagaatttggtca
ttctttactaactagcttagcactcactatgtagcccaggctggcctcaa
acccatgactcatcagcctcagtgccaggatcaacaggtgcttgtcacca
ctgccagttctttcattaagggacttcaatgtagagaaataaaataagca
accatttagccaccacccagccttttaaatgttgtgcggtgccttctttg
tatcctatacgtatcttcttatctttccccagaggaaaagttatttacac
acacatacagagagagagagagagagagactgagaagagagagagagaga
ctgagagattgtgtgtgtctgtgtatgcctggtatattatgcgacgtata
aatgccgctctgcgtatactgattcctgcttacagtctgcatgatacagc
tacacagtcttcatgactgctctacttccttgcacatgaagattgttatg
cctgatccacaagcagtgactctgatgcgtt
gaattcaaatgaggggcccaggactgatatatttgaaatgaaacctagag
aagctttctcaaccaatggatctgatagatgtaggagctgaaaggagaac
gttccgggtgtggctttgtcgactgactaggttagtcaacaacctacagg
agaggaaagactgatagagcaggttagaagttgtctggtaagggtgggaa
tggattccattcaggagctgttgatttggggattcgcctgagacacgcaa
gcggcgatataatgaaggtagagagatttgtttagagagtaaaggttggg
ctagataggagtataaagccataggattgagggctgggtatggagcttgg
tgctagagcatgcctgagaccctgggtttgatgtctggcaccacaaaaac
atgaataaagctatgagaataatgagttggtcaacacattgacctcgcta
ctccggagactcctcctgcaagtctttaaatggctcatggttggtaatcc
ctgtgttcctgttcctcaaacttcagacccacccaccggggtgtttgatt
tggaactgaattcagtgccaaggggctcactcatcctggaacgtctgacc
ctcccctgggtatgctagcatcgagcggaggaatgtcttattgagatgta
gctaaaatggaagagggctccaaacagggccaaggaaatctaacatatat
cacctaagaggccacctagcatgggaatatctgaaaagagacagtccaac
aaataattgttagtattccttctagactccgcccaataggtagacctgtc
ttgctataaaagtggctctttggccccctgccccctgttctctccccctc
ctcttctctgtctctgtctgtacccccttcttcaactccccttctcatgc
ctccaaattattctatgctacacctgtgctatggctggtacctggagggt
ggggttggggacgcctcatcatgagcccaccaaggcaacccttcaaacct
aatttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_94964943_94965947
seq2: B6Ng01-082I21.g_68_1073

seq1  GAATTCAAATGAGGGGCCCAGGACTGATATATTTGAAATGAAACCTAGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAATGAGGGGCCCAGGACTGATATATTTGAAATGAAACCTAGAG  50

seq1  AAGCTTTCTCAACCAATGGATCTGATAGATGTAGGAGCTGAAAGGAGAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTTTCTCAACCAATGGATCTGATAGATGTAGGAGCTGAAAGGAGAAC  100

seq1  GTTCCGGGTGTGGCTTTGTCGACTGACTAGGTTAGTCAACAACCTACAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCGGGTGTGGCTTTGTCGACTGACTAGGTTAGTCAACAACCTACAGG  150

seq1  AGAGGAAAGACTGATAGAGCAGGTTAGAAGTTGTCTGGTAAGGGTGGGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGAAAGACTGATAGAGCAGGTTAGAAGTTGTCTGGTAAGGGTGGGAA  200

seq1  TGGATTCCATTCAGGAGCTGTTGATTTGGGGATTCGCCTGAGACACGCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATTCCATTCAGGAGCTGTTGATTTGGGGATTCGCCTGAGACACGCAA  250

seq1  GCGGCGATATAATGAAGGTAGAGAGATTTGTTTAGAGAGTAAAGGTTGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGGCGATATAATGAAGGTAGAGAGATTTGTTTAGAGAGTAAAGGTTGGG  300

seq1  CTAGATAGGAGTATAAAGCCATAGGATTGAGGGCTGGGTATGGAGCTTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGATAGGAGTATAAAGCCATAGGATTGAGGGCTGGGTATGGAGCTTGG  350

seq1  TGCTAGAGCATGCCTGAGACCCTGGGTTTGATGTCTGGCACCACAAAAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTAGAGCATGCCTGAGACCCTGGGTTTGATGTCTGGCACCACAAAAAC  400

seq1  ATGAATAAAGCTATGAGAATAATGAGTTGGTCAACACATTGACCTCGCTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATAAAGCTATGAGAATAATGAGTTGGTCAACACATTGACCTCGCTA  450

seq1  CTCCGGAGACTCCTCCTGCAAGTCTTTAAATGGCTCATGGTTGGTAATCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCGGAGACTCCTCCTGCAAGTCTTTAAATGGCTCATGGTTGGTAATCC  500

seq1  CTGTGTTCCTGTTCCTCAAACTTCAGACCCACCCACCGGGGTGTTTGATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTTCCTGTTCCTCAAACTTCAGACCCACCCACCGGGGTGTTTGATT  550

seq1  TGGAACTGAATTCAGTGCCAAGGGGCTCACTCATCCTGGAACGTCTGACC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAACTGAATTCAGTGCCAAGGGGCTCACTCATCCTGGAACGTCTGACC  600

seq1  CTCCCCTGGGTATGCTAGCATCGAGCGGAGGAATGTCTTATTGAGATGTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCCTGGGTATGCTAGCATCGAGCGGAGGAATGTCTTATTGAGATGTA  650

seq1  GCTAAAATGGAAGAGGGCTCCAAACAGGGCCAAGGAAATCTAACATATAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAAAATGGAAGAGGGCTCCAAACAGGGCCAAGGAAATCTAACATATAT  700

seq1  CACCTAAGAGGCCACCTAGCATGGGAATATCTGAAAAGAGACAGTCCAAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTAAGAGGCCACCTAGCATGGGAATATCTGAAAAGAGACAGTCCAAC  750

seq1  AAATAATTGTTAGTATTCCTTCTAGACTCCGCCCAATAGGTAGACCTGTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAATTGTTAGTATTCCTTCTAGACTCCGCCCAATAGGTAGACCTGTC  800

seq1  TTGCTATAAAAGTGGCTCTTTGGCCCCCTGCCCCCTGTTCTCTCCCCCTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTATAAAAGTGGCTCTTTGGCCCCCTGCCCCCTGTTCTCTCCCCCTC  850

seq1  CTCTTCTCTGTCTCTGTCTGTACCCCCTTC-TCAACTCCCCTTCTCATGC  899
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  CTCTTCTCTGTCTCTGTCTGTACCCCCTTCTTCAACTCCCCTTCTCATGC  900

seq1  CTCCAAATTATTCTATGCTACACCTGTGCTATGGCTGGTACCTGGAGGGT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAAATTATTCTATGCTACACCTGTGCTATGGCTGGTACCTGGAGGGT  950

seq1  GGGGTTGGGGACGCCTCATCATGAGCCCACCAAGGCAACCCTTCCAACCT  999
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  GGGGTTGGGGACGCCTCATCATGAGCCCACCAAGGCAACCCTTCAAACCT  1000

seq1  AATTTG  1005
      ||||||
seq2  AATTTG  1006