BAC Information

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BAC

Clone NameB6Ng01-082L06
Chromosome10 (Build37)14 (Build37)
Map Location 104,053,556 - 104,054,36356,856,395 - 56,857,297
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneEG627488, EG667692, EG667695, LOC100043292
Downstream geneLOC100042383, Tmtc2, EG627573
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-082L06.bB6Ng01-082L06.g
ACCDH897178DH897179
length990901
definitionDH897178|Mus musculus domesticus DNA, BAC clone: B6Ng01-082L06, 5' end.DH897179|Mus musculus domesticus DNA, BAC clone: B6Ng01-082L06, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(104,053,556 - 104,054,363)(56,856,395 - 56,857,297)
sequence
gaattctcatctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaaaatcaaaaattcaggtgacagc
agatgctggcaaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggcggtttctaa
gaaaactggacatagtactaccggaggatccagtaatacctctcctgggc
atatatccagaagatgtcccaaccggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatttacacaatg
gactactgctcagctattaaaaggaatgaatttatgaaattcctaggcaa
atggatggacctggaaggcatcatcctgagtgaggtaacccaatcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccagaaac
ttaggatacccaagatataagatacattttgctaaacgcatgaaacttaa
gaataatgaagaccaaagtgtggacactttgctccttcttagaattggga
acaaaacacccatggaaggagttacagagacaaagtttggagctggagtc
tattttcaaatgctagtgccaaatgtcaaagcaacatcactgttcacaaa
actgtattcagctggattcagatgcagcaagttattttccttaatttgat
ctcctcataatcaccttcacctagaacagtcacggctttaaaacatggta
ttgacagttagattcttcttaaagataaatccactaaactggtaaaattg
attccattgtcccattctggcagacatttttgtttcagtt
gaattcactgtgagggggaatccaagagttagcttgttcaatttagagat
gaacagaaatctgtggcaagaacccttagacagggatgccagcctaggac
gatggttcttagattctgaagaggtaagttacaggggcaaaatcagtact
agaaagtgtcccaagacttaaagtgcattgctttttggaagtgtaaaggc
agaaagctctgcatagatatgggaggctgagggccaggctgaaaagagat
tttgtttgtttgtttaaagaattgcttgttgagagagactcatggaaaga
tgcagaagcaacttggtatagatgatgtagcagtgagaatccagagaccc
atgagcagagaaaactgatcccccctaccaagagaagctgttcagatttt
gttgagggcagagataaggagcagatatgggtaaggtggtctgggttggg
gtgagagaaattccaagataggtgacttgaggagaagagagttgaatttc
tgaatccctggagctgaagacagtggtgagtgaggcagtatgagattggc
tgtcagagagggaaggactacaaaggaggaaggtatccacatgctatagc
aggcataaggttatccacatatgatagcaggcagttcgtcatccacatac
tgtagcaggcaggaggtcatccacatactgtagcaggcaggaggtcattc
acatactgtagcacacagttgatcatccacatactgtagcacacagttgg
tcttccacatactgtagcaggcagtagggaaaagtggggaaagcatgaca
ggaccttagtgactgcctgacataaaatgtgggagggactgtgtctgaat
cctggaagaaagacagtccaagtcagttgttgggatttttgactataggg
g
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_104053556_104054363
seq2: B6Ng01-082L06.b_45_640 (reverse)

seq1  CTGGGCTAATATCCACTTATCAGTGAGTACATATTGCGCGAGTTCCTTTG  50
      |||||||||||||||||||||||||||||||||||| | |||||||||||
seq2  CTGGGCTAATATCCACTTATCAGTGAGTACATATTGTGTGAGTTCCTTTG  50

seq1  TGATTGGGTTACCGCACTCAGGATGATACTCTCCAGGTCCATCCATTTGC  100
      ||||||||||||| ||||||||||||| |  |||||||||||||||||||
seq2  TGATTGGGTTACCTCACTCAGGATGATGCCTTCCAGGTCCATCCATTTGC  100

seq1  CTAGGAATTTCATAAATTCATTCTTTTTAATAGCTCCATTTACATTTAAT  150
      ||||||||||||||||||||||| ||||||||||                
seq2  CTAGGAATTTCATAAATTCATTCCTTTTAATAGC----------------  134

seq1  TTAATTAATGTAATTACAATTAATTAATTTATTAATTAAATAATTTAATA  200
                                                        
seq2  --------------------------------------------------  134

seq1  ATTTAATTGATAAATTAATTTAATTAATTAATTTAATTAATTAAATTAAA  250
                                                        
seq2  --------------------------------------------------  134

seq1  TAATAATTTAATAATAAATTAAATATTTTAAAATTAATAATAATTTTATA  300
                                                   | |  
seq2  ---------------------------------------------TGAGC  139

seq1  AGTAAATAATTTAATTAATGTAATTTAATTAATGTAATTACATTACATTT  350
      ||||                                              
seq2  AGTA----------------------------------------------  143

seq1  AATAGCTCCATTGTGTAAATGTACCACATTTTCTGTATCTATTCCTCTGT  400
            ||||||||||||||||||||||||||||||||| ||||||||||
seq2  -----GTCCATTGTGTAAATGTACCACATTTTCTGTATCCATTCCTCTGT  188

seq1  TGAGGGGCATCTGGGTTCTTTCCAGCTCCTGGCTATTATAAATAAGGCTG  450
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  TGAGGGGCATCTGGGTTCTTTCCAGCTTCTGGCTATTATAAATAAGGCTG  238

seq1  CTATGAATATAGTGGAGCATGTGTCCTTCTTACCGGTTGGGGCATCTTCT  500
      ||||||| ||||||||||||||||||||||||||||||||| ||||||||
seq2  CTATGAACATAGTGGAGCATGTGTCCTTCTTACCGGTTGGGACATCTTCT  288

seq1  GGATATATGCCCAGAAGAGGTATTGCTGGATCCTCCGGTAGTACTATGTC  550
      |||||||||||||| ||||||||| |||||||||||||||||||||||||
seq2  GGATATATGCCCAGGAGAGGTATTACTGGATCCTCCGGTAGTACTATGTC  338

seq1  CAATTTTCTGACGAACCGCCAGACGGATTTCCAGAGTGGTTGTACAAGCC  600
      || |||||| |  ||||||||||| |||||||||||||||||||||||| 
seq2  CAGTTTTCTTAGAAACCGCCAGACTGATTTCCAGAGTGGTTGTACAAGCT  388

seq1  TGCAATCCCACCAACAATGGAGGAGTGTTCCTCTTTCTCCACATCCTCGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TGCAATCCCACCAACAATGGAGGAGTGTTCCTCTTTCTCCACATCCTTGC  438

seq1  CAGCATCTGCTGTCACCTGAATTTTTGATCTTAGCCATTCTGACTGGTGT  700
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  CAGCATCTGCTGTCACCTGAATTTTTGATTTTAGCCATTCTGACTGGTGT  488

seq1  GAGGTGGAATCTCAGGGTTGTTTTGATTTGCATTTCCCTGATGATTAAGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTGGAATCTCAGGGTTGTTTTGATTTGCATTTCCCTGATGATTAAGG  538

seq1  ATGTTGAACATTTTTTCAGGTGCTTCTCTGCCATTCGGTATTCCTCAGGT  800
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  ATGTTGAACATTTTTTCAGGTGCTTCTCTGCCATTCGGTATTCCTCAGAT  588

seq1  GAGAATTC  808
      ||||||||
seq2  GAGAATTC  596

seq1: chr14_56856395_56857297
seq2: B6Ng01-082L06.g_69_969 (reverse)

seq1  CCCCTATAGTCAACAATCCCAACAACTGACTTGGACTGTCTTTCTTCCAG  50
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  CCCCTATAGTCAAAAATCCCAACAACTGACTTGGACTGTCTTTCTTCCAG  50

seq1  GATTCAGACACAGTCCCTCCCCACCTTTTCTGGTCAGGCAGTCACTAAGG  100
      |||||||||||||||||| ||||| |||| | ||||||||||||||||||
seq2  GATTCAGACACAGTCCCT-CCCACATTTTAT-GTCAGGCAGTCACTAAGG  98

seq1  TCCTGTCCTGCCTTCCCCACTTTTCCCTACTGCCTGCTACAGTATGTGGA  150
      ||||||| ||| ||||||||||||||||||||||||||||||||||||||
seq2  TCCTGTCATGCTTTCCCCACTTTTCCCTACTGCCTGCTACAGTATGTGGA  148

seq1  AGACCAACTGTGTGCTACAGTATGTGGATGATCAACTGTGTGCTACAGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCAACTGTGTGCTACAGTATGTGGATGATCAACTGTGTGCTACAGTA  198

seq1  TGTGAATGACCTCCTGCCTGCTACAGTATGTGGATGACCTCCTGCCTGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAATGACCTCCTGCCTGCTACAGTATGTGGATGACCTCCTGCCTGCT  248

seq1  ACAGTATGTGGATGACGAACTGCCTGCTATCATATGTGGATAACCTTATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTATGTGGATGACGAACTGCCTGCTATCATATGTGGATAACCTTATG  298

seq1  CCTGCTATAGCATGTGGATACCTTCCTCCTTTGTAGTCCTTCCCTCTCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCTATAGCATGTGGATACCTTCCTCCTTTGTAGTCCTTCCCTCTCTG  348

seq1  ACAGCCAATCTCATACTGCCTCACTCACCACTGTCTTCAGCTCCAGGGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCCAATCTCATACTGCCTCACTCACCACTGTCTTCAGCTCCAGGGAT  398

seq1  TCAGAAATTCAACTCTCTTCTCCTCAAGTCACCTATCTTGGAATTTCTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAAATTCAACTCTCTTCTCCTCAAGTCACCTATCTTGGAATTTCTCT  448

seq1  CACCCCAACCCAGACCACCTTACCCATATCTGCTCCTTATCTCTGCCCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCCAACCCAGACCACCTTACCCATATCTGCTCCTTATCTCTGCCCTC  498

seq1  AACAAAATCTGAACAGCTTCTCTTGGTAGGGGGGATCAGTTTTCTCTGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAATCTGAACAGCTTCTCTTGGTAGGGGGGATCAGTTTTCTCTGCT  548

seq1  CATGGGTCTCTGGATTCTCACTGCTACATCATCTATACCAAGTTGCTTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGGTCTCTGGATTCTCACTGCTACATCATCTATACCAAGTTGCTTCT  598

seq1  GCATCTTTCCATGAGTCTCTCTCAACAAGCAATTCTTTAAACAAACAAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCTTTCCATGAGTCTCTCTCAACAAGCAATTCTTTAAACAAACAAAC  648

seq1  AAAATCTCTTTTCAGCCTGGCCCTCAGCCTCCCATATCTATGCAGAGCTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCTCTTTTCAGCCTGGCCCTCAGCCTCCCATATCTATGCAGAGCTT  698

seq1  TCTGCCTTTACACTTCCAAAAAGCAATGCACTTTAAGTCTTGGGACACTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCTTTACACTTCCAAAAAGCAATGCACTTTAAGTCTTGGGACACTT  748

seq1  TCTAGTACTGATTTTGCCCCTGTAACTTACCTCTTCAGAATCTAAGAACC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGTACTGATTTTGCCCCTGTAACTTACCTCTTCAGAATCTAAGAACC  798

seq1  ATCGTCCTAGGCTGGCATCCCTGTCTAAGGGTTCTTGCCACAGATTTCTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGTCCTAGGCTGGCATCCCTGTCTAAGGGTTCTTGCCACAGATTTCTG  848

seq1  TTCATCTCTAAATTGAACAAGCTAACTCTTGGATTCCCCCTCACAGTGAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATCTCTAAATTGAACAAGCTAACTCTTGGATTCCCCCTCACAGTGAA  898

seq1  TTC  903
      |||
seq2  TTC  901