BAC Information

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BAC

Clone NameB6Ng01-083F09
Chromosome10 (Build37)X (Build37)
Map Location 47,747,990 - 47,749,16270,045,318 - 70,045,829
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC100041632, LOC668252, LOC100042387, LOC100041663, LOC100042398
Downstream geneLOC546562, LOC100041689
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-083F09.bB6Ng01-083F09.g
ACCDH897626DH897627
length1,1661,001
definitionDH897626|Mus musculus domesticus DNA, BAC clone: B6Ng01-083F09, 5' end.DH897627|Mus musculus domesticus DNA, BAC clone: B6Ng01-083F09, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(47,747,990 - 47,749,162)(70,045,318 - 70,045,829)
sequence
gaattctgtatgttacctctcagtaagataatttaggatcaatcttcagc
aattaattggtacaaaactaagttaaaaggtttaagaagatgataatttc
agtagtgctattgggaaatatgtcaactacctgaagctgactctcacgct
ctggcgctctatataggttcacagaaattagacatttgctttccttgctt
actaaggaaagcctctccactggctgagtgtaaggaatggtgagctttaa
cacaaacaggaatttaactggctgaagtgaggaaaacacaggcaaaacca
gcaacagctgtggctcttattcattccttcctggaccaaactaacaaaaa
tacatgacaaactgagaaataacaagtcctattagttatgaggccctgtg
attggctcttagctgcctaggagttccacctaaattatattaagccaaaa
tgctttccctttgtttgcagaaaaaaagtggagtttatttcactttcata
ctcaagacccatatcaccattactccctccctaacaaccccagccatttc
acctccattcagatttgcatgcactgtccttcagtgcatttgtgaactta
atgctcttactgtcttcttcctttcctttttatcctggtccctgacaagc
atccccattttatctaacctctgggtttctcttcttagtacatcttataa
tacttttataaatgaggccaataatttgcacaagtagatttgtgaacatt
gttgacattgtactgtggcaaaataaatgatgagtcagtgttagccaggt
aatagagaagtagcaaatatagaactagaggcagagtggaaataaaggag
agtagaggaggacctatcctcttacaagagaaaatctatgagtagctatg
tggacagtcactttttttactcaatttacatgaagaagacatcatcaggc
ctagaaagaagagttcttttattgatttttcaatagtgaacagaatattc
taaaaccagctttgtactggtatatagtttgcagcagttttaaagtattg
caattatgtagcatcataattttatgaatttgttttcttgcttgaacatt
ctgggggtggccaaaatatttttcttagtttgactctaggtaaaaggcat
atggcatgcacctgca
gaattcaaaaagctggactccagaaaatcaaataaccccattaaaaatgg
ggcacagagctaaactaatcaaataaccccattaaaaaatggggctcaga
gctaaacaaagaattctcaactgaggaataccgaatggctgagaagcacc
tgaaaaaatgctcagcatccttaatcatcagagaaatgcaaatcaaaaca
accctgagattccatctcacaccagtcagaatggctaagattaaaaattc
aggtgacagcagatgctggcaaggatgtgaagaaagaggaacactcctcc
attgttggtgggattgcaagcttgtacaaccactctggaaatcagtctgg
cggttcctcagaaaattggacatagtactaccagaggatcccgatcccgc
aatacctctcctgggcacatatccagaagatgtcccaactggtaagaagg
acacatgctccactatgttcatagcagtcttatttataatagctagaagc
tggaaagaacccagatgcccctcaacagaggaatggatacaaaaaatgtg
gtatgtttacacaatggagtactactcagctattaaaaagaatgaattta
tgaaattcctaggcaaatggatggacctggagggcatcatcctgagtgag
gtaacacaatcacaaaagaactcaaatgatatgttctcactgataagtgg
atattagcccagaaacttagtgtagcgagatataagatacaattttcaac
acacatgaaactgaagaagaacaaagaacaaagtgtggacactttgccct
ttcttagaattggatacaatcacccatggaaaggagttacagagacaaag
tttggagcttagacaaaaggatggaccatctagagactgccatatccaga
gatccatcccataattagcctccaaacaatgacatcattgcatactctac
agattttgctgaaagaccctgatatagctgtctcttgtgagactaggcgg
g
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_47747990_47749162
seq2: B6Ng01-083F09.b_48_1213

seq1  GAATTCTGTATGTTACCTCTCAGTAAGATAATTTAGGATCAATCTTCAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTATGTTACCTCTCAGTAAGATAATTTAGGATCAATCTTCAGC  50

seq1  AATTAATTGGTACAAAACTAAGTTAAAAGGTTTAAGAAGATGATAATTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAATTGGTACAAAACTAAGTTAAAAGGTTTAAGAAGATGATAATTTC  100

seq1  AGTAGTGCTATTGGGAAATATGTCAACTACCTGAAGCTGACTCTCACGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGTGCTATTGGGAAATATGTCAACTACCTGAAGCTGACTCTCACGCT  150

seq1  CTGGCGCTCTATATAGGTTCACAGAAATTAGACATTTGCTTTCCTTGCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCGCTCTATATAGGTTCACAGAAATTAGACATTTGCTTTCCTTGCTT  200

seq1  ACTAAGGAAAGCCTCTCCACTGGCTGAGTGTAAGGAATGGTGAGCTTTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAGGAAAGCCTCTCCACTGGCTGAGTGTAAGGAATGGTGAGCTTTAA  250

seq1  CACAAACAGGAATTTAACTGGCTGAAGTGAGGAAAACACAGGCAAAACCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAACAGGAATTTAACTGGCTGAAGTGAGGAAAACACAGGCAAAACCA  300

seq1  GCAACAGCTGTGGCTCTTATTCATTCCTTCCTGGACCAAACTAACAAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACAGCTGTGGCTCTTATTCATTCCTTCCTGGACCAAACTAACAAAAA  350

seq1  TACATGACAAACTGAGAAATAACAAGTCCTATTAGTTATGAGGCCCTGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATGACAAACTGAGAAATAACAAGTCCTATTAGTTATGAGGCCCTGTG  400

seq1  ATTGGCTCTTAGCTGCCTAGGAGTTCCACCTAAATTATATTAAGCCAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGCTCTTAGCTGCCTAGGAGTTCCACCTAAATTATATTAAGCCAAAA  450

seq1  TGCTTTCCCTTTGTTTGCAGAAAAAAAGTGGAGTTTATTTCACTTTCATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTCCCTTTGTTTGCAGAAAAAAAGTGGAGTTTATTTCACTTTCATA  500

seq1  CTCAAGACCCATATCACCATTACTCCCTCCCTAACAACCCCAGCCATTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAGACCCATATCACCATTACTCCCTCCCTAACAACCCCAGCCATTTC  550

seq1  ACCTCCATTCAGATTTGCATGCACTGTCCTTCAGTGCATTTGTGAACTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCCATTCAGATTTGCATGCACTGTCCTTCAGTGCATTTGTGAACTTA  600

seq1  ATGCTCTTACTGTCTTCTTCCTTTCCTTTTTATCCTGGTCCCTGACAAGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTCTTACTGTCTTCTTCCTTTCCTTTTTATCCTGGTCCCTGACAAGC  650

seq1  ATCCCCATTTTATCTAACCTCTGGGTTTCTCTTCTTAGTACATCTTATAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCCATTTTATCTAACCTCTGGGTTTCTCTTCTTAGTACATCTTATAA  700

seq1  TACTTTTATAAATGAGGCCAATAATTTGCACAAGTAGATTTGTGAACATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTTATAAATGAGGCCAATAATTTGCACAAGTAGATTTGTGAACATT  750

seq1  GTTGACATTGTACTGTGGCAAAATAAATGATGAGTCAGTGTTAGCCAGGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGACATTGTACTGTGGCAAAATAAATGATGAGTCAGTGTTAGCCAGGT  800

seq1  AATAGAGAAGTAGCAAATATAGAACTAGAGGCAGAGTGGAAATAAAGGAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGAGAAGTAGCAAATATAGAACTAGAGGCAGAGTGGAAATAAAGGAG  850

seq1  AGTAGAGGAGGACCTATCCTCTTACAAGAGAAAAATCTATGAGTAGCTAT  900
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  AGTAGAGGAGGACCTATCCTCTTACAAGAG-AAAATCTATGAGTAGCTAT  899

seq1  GTGGACAGTCACTTTTTTTACTCAATTTACATGAAGAAGACATCATCAGG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGACAGTCACTTTTTTTACTCAATTTACATGAAGAAGACATCATCAGG  949

seq1  CCTAGAAAGAAGAGTTCTTTTATTGATTTTTCAATAGGTGAACAGAATAT  1000
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  CCTAGAAAGAAGAGTTCTTTTATTGATTTTTCAATA-GTGAACAGAATAT  998

seq1  TCTAAAACCAGCTTTGTACTGGTATATAGTTTGCAGCAGTTTTAAAGTAT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAAACCAGCTTTGTACTGGTATATAGTTTGCAGCAGTTTTAAAGTAT  1048

seq1  TGCAAATTATGTAGCAATCATAATTTTATGAATTTGTTTCCTTGCTTTGA  1100
      ||| ||||||||||| ||||||||||||||||||||||| ||||| ||||
seq2  TGC-AATTATGTAGC-ATCATAATTTTATGAATTTGTTTTCTTGC-TTGA  1095

seq1  ACATTCTGGGTGTTGTCATAATA-TTTTCTTAGTTTGACTCTAGGTTAAG  1149
      |||||||||| || | || |||| ||||||||||||||||||||||  | 
seq2  ACATTCTGGGGGTGGCCAAAATATTTTTCTTAGTTTGACTCTAGGT--AA  1143

seq1  AAGGCATAATGGCATGCACCTGCA  1173
      ||||||| ||||||||||||||||
seq2  AAGGCAT-ATGGCATGCACCTGCA  1166

seq1: chrX_70045318_70045829
seq2: B6Ng01-083F09.g_91_619

seq1  GAAAAGCAAATAACCCCATTAAAAATGGGGTAC-----------AATCAA  39
      ||||| |||||||||||||||||||||||| ||           ||||||
seq2  GAAAATCAAATAACCCCATTAAAAATGGGGCACAGAGCTAAACTAATCAA  50

seq1  ATAACCCCATTAAAAAATGGGGCTCAGAACTGAATAAAGAATTCTCACCT  89
      |||||||||||||||||||||||||||| || || |||||||||||| ||
seq2  ATAACCCCATTAAAAAATGGGGCTCAGAGCTAAACAAAGAATTCTCAACT  100

seq1  GAGGAATACTGAATGGCAGAGAAGCACCTGAAAAAATGTTCAACATCCTT  139
      ||||||||| ||||||| |||||||||||||||||||| ||| |||||||
seq2  GAGGAATACCGAATGGCTGAGAAGCACCTGAAAAAATGCTCAGCATCCTT  150

seq1  AATCATCAGGGAAATGCAAATCAAACCAACCCTGAGATTCCACCTCACAC  189
      ||||||||| ||||||||||||||| |||||||||||||||| |||||||
seq2  AATCATCAGAGAAATGCAAATCAAAACAACCCTGAGATTCCATCTCACAC  200

seq1  CAGTCAGAATGGCTAAGATCAAAAATTCAGGTGACAGCAGATGCTGGCAA  239
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  CAGTCAGAATGGCTAAGATTAAAAATTCAGGTGACAGCAGATGCTGGCAA  250

seq1  GAATGTGGAGAAAGAGGAACACTTCTCCATTGTTGGTGGGATTGCAGGCT  289
      | ||||| ||||||||||||||| |||||||||||||||||||||| |||
seq2  GGATGTGAAGAAAGAGGAACACTCCTCCATTGTTGGTGGGATTGCAAGCT  300

seq1  TGTACAACCACTCTGGAAATCAGTCTGGTGGTTCCTCAGAAAATTGGACA  339
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  TGTACAACCACTCTGGAAATCAGTCTGGCGGTTCCTCAGAAAATTGGACA  350

seq1  TAGTACTACCGGAG------GATCCAGCAATACCTCTCCTGGGCATATAT  383
      |||||||||| |||      ||||| ||||||||||||||||||| ||||
seq2  TAGTACTACCAGAGGATCCCGATCCCGCAATACCTCTCCTGGGCACATAT  400

seq1  CCAGAAGATGTCCCAACGGGTAAGAAGGACACATGCTCCACTATGTTCAT  433
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  CCAGAAGATGTCCCAACTGGTAAGAAGGACACATGCTCCACTATGTTCAT  450

seq1  AGCAGCCTTATTTATAATAGCCAGAAGCTGGAAAGAACCCAGATGCCCCT  483
      ||||| ||||||||||||||| ||||||||||||||||||||||||||||
seq2  AGCAGTCTTATTTATAATAGCTAGAAGCTGGAAAGAACCCAGATGCCCCT  500

seq1  CAACAGAGGAATGGATACAGAAAATGTGG  512
      ||||||||||||||||||| |||||||||
seq2  CAACAGAGGAATGGATACAAAAAATGTGG  529