BAC Information

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BAC

Clone NameB6Ng01-083M23
Chromosome10 (Build37)13 (Build37)
Map Location 91,981,590 - 91,982,33082,135,665 - 82,136,715
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC100041799, LOC667203
Downstream geneLOC216229, LOC100041814, Nedd1, Gm872, 4930485B16Rik, EG667314, Pctk2, Elk3, LOC100041854, Lta4h, Hal
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-083M23.bB6Ng01-083M23.g
ACCDH897967DH897968
length9621,051
definitionDH897967|Mus musculus domesticus DNA, BAC clone: B6Ng01-083M23, 5' end.DH897968|Mus musculus domesticus DNA, BAC clone: B6Ng01-083M23, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(91,981,590 - 91,982,330)(82,135,665 - 82,136,715)
sequence
gaattcacgaagttgaatccttctcaacagtctgttttacgggaacactt
cattaccaccattccccagctgaacagttctgaattcacgcagttgaatc
cttctcaacagtctgttttacgggaacctttatgaccgtgacccgcagtt
ctggttctggaatgagggatcttccttgtgccagtgatggtaaccgtccc
aggttttctcgtcccgggatttctcgtcccaggtcttctcgtcccaggtc
ttctcgtcccagggcttctcgtcccaggtcttctcgtcccgggtcttctt
gtcccgtcccgggtctcagcaccaactcttacacgcattcatgcgaccgg
ccaggaagaacacaacaaaccgaatcttctgcggcaaaagctttattgct
tacatcttcaggagcaagagagcaagagtcagagcaagagaaagaaagaa
agcaagagtgcaagagcaagagcgcaagagccagagcaagagtgcaagaa
aaagaacaagaacaagaaagcaagagaaagaacaagaacaagaaagcaag
agagagaaaaagaatggcaaaaccccgtcccctttaaggagaattatcct
ccgcctaggacgtattactccctgattggctgcagcccatcggctcagtt
gtcatcacgagaaaggcagaacacatggcgggaaaactgcccctgcacgt
gtgcagattatgtttaccacttagaacacagctgtcagcgccatcttata
atggcaaatgtgagggcggctcccaacagtcaaatgctttctcagcatct
aatgagatgatcatgtgatttttgtctttgagtttgtttatatactggat
tgcattgatagatttccatatattgaactgtaaaggcattttctcaatta
gtgattctcaagtgctgggtttctcactcactaataggaaacagacttta
cataccctgatg
gtctcatcacctacaaccaacccttggtgattgctcctcttggtcctttt
cagtcttttgtgatagttgtgcaaatgtgtgtgaattaggtttccactgt
ggtcttgataatccttatttctaattactattgatgatagtgtttcaata
ttcttattggccatatgtacatattctttgaaaattcatattaaagtctt
gtttcatgtctttattgttttcttgttggctggaagttgaaccttggtct
ctgtgtacacaaagaaagcatcatttcattgagctatatatccttagggc
cccactcccccattttaaaattacattgcttagctttatgttgtcattgt
ttcaggtattacctatgcattttgcatattaatactttagtataactttt
acatttttctttcatttagtgggttactttgaactctgttgatactatta
tttgatattcaaattaacaatttgtccattttttgggactttgatgtcag
ttaaaaatactactatgaaatttattgtattaagtttcctacttcatata
ttttcgtccaagaattttgtagttctacaactcacaattagttctccgat
ccattttgcaataattagtttagttaaccagataataatatggtattcat
aagcatcaaacttctatttttttgattttagatatctagtttttctgatg
ccaattttctgaactattgcctttctgccttgaatgatgttggtagctga
ctattgctgtgaaggtttatttctggggtctctattccattttattggtc
cacatcacagtctttatatcagttagtgttctgtttggaatcacttcaat
tctaactgatcatatcattctctttgttctgattgtttaactcttgcttt
tgagtttctattacacagcattcattgaactttcttgggatattccccaa
ccatacttgtctttcattatctttgtgatacttttttataactttccata
tctctgttctttatctgtttctggggagtctcgtatctatcatcttctat
c
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_91981590_91982330
seq2: B6Ng01-083M23.b_46_780 (reverse)

seq1  ACAGCTGTGTTCTAAGTGGTAAACATAATCTGCACACGTGCAGGGGCAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCTGTGTTCTAAGTGGTAAACATAATCTGCACACGTGCAGGGGCAGT  50

seq1  TTTCCCGCCATGTGTTCTACCTTTCTCGTGATGACAACTGGGCCGATGGG  100
      |||||||||||||||||| ||||||||||||||||||||| |||||||||
seq2  TTTCCCGCCATGTGTTCTGCCTTTCTCGTGATGACAACTGAGCCGATGGG  100

seq1  CTGCAGCCAATCAGGGAGTAATACGTCCTAGGCGGAGGATAATTCTCCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAGCCAATCAGGGAGTAATACGTCCTAGGCGGAGGATAATTCTCCTT  150

seq1  AAAAGGGACGGGGTTTTGCCATTCTTTTTCTCTCTCTTGTTCTTGCTTTT  200
      ||| |||||||||||||||||||||||||||||||||||  ||| ||| |
seq2  AAAGGGGACGGGGTTTTGCCATTCTTTTTCTCTCTCTTG--CTTTCTTGT  198

seq1  TCTCTCTCTTGTTCTTGCTTTCTTTTTCTCTCTCTTGCTTTCTTGTTCTT  250
      |||   ||||  |||||||||||| ||||   ||||  |||||||  || 
seq2  TCTTGTTCTTTCTCTTGCTTTCTTGTTCTTGTTCTT--TTTCTTGCACTC  246

seq1  TTTCTCT--CTCTTGCTTTCTTGTTCTTG--TTCTTTCTCTCTCTCTTGC  296
      || ||||  |||||||  ||||| |||||   |||| || ||| ||||  
seq2  TTGCTCTGGCTCTTGCGCTCTTGCTCTTGCACTCTTGCTTTCTTTCTT--  294

seq1  ACTCTTGC----ACTCTTGCTCTCTGGCTCCTGAAGATGTAAGCAATAAA  342
       |||||||    ||||||||||||| ||||||||||||||||||||||||
seq2  TCTCTTGCTCTGACTCTTGCTCTCTTGCTCCTGAAGATGTAAGCAATAAA  344

seq1  GC-TTTGCCGCAGAAGATTCCGGTTTGTTGCGTTCTTCCTGGCCGGTCGC  391
      || |||||||||||||||| |||||||||| |||||||||||||||||||
seq2  GCTTTTGCCGCAGAAGATT-CGGTTTGTTGTGTTCTTCCTGGCCGGTCGC  393

seq1  --GAACGCGTGTAAGAGTTGGTGCTGAGACCCGGGACGAGAAGACCCGGG  439
        ||| ||||||||||||||||||||||||||||||          ||||
seq2  ATGAATGCGTGTAAGAGTTGGTGCTGAGACCCGGGA----------CGGG  433

seq1  ACGAGAAGACCTGGGATGAGAAGACCTGGGACGAGAAATCCCGGGACGAG  489
      || |||||||| |||| ||||||||||||||||||||  || ||||||||
seq2  ACAAGAAGACCCGGGACGAGAAGACCTGGGACGAGAAGCCCTGGGACGAG  483

seq1  AAGACCTGGGACGAGAAGACCTGGGACGAGAAGACCTGGGACGAGAAAAC  539
      ||||||||||||||||||||||||||||||||  || |||||||||||||
seq2  AAGACCTGGGACGAGAAGACCTGGGACGAGAAATCCCGGGACGAGAAAAC  533

seq1  CTGGGACGGTTACCATCACAGGCGCAAGGAAGATCCCTCATTCCGGAACC  589
      ||||||||||||||||||| ||| |||||||||||||||||||| |||||
seq2  CTGGGACGGTTACCATCACTGGCACAAGGAAGATCCCTCATTCCAGAACC  583

seq1  AGAACTGCGGGTCACGGTCATAAAGGTTCCCGTAAAACAGACTGTTGAGA  639
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACTGCGGGTCACGGTCATAAAGGTTCCCGTAAAACAGACTGTTGAGA  633

seq1  AGGATTCAACTGCGTGAATTCAGAACTCTTCAGCTGGGGAACGGTGGTAA  689
      ||||||||||||||||||||||||||| ||||||||||||| ||||||||
seq2  AGGATTCAACTGCGTGAATTCAGAACTGTTCAGCTGGGGAATGGTGGTAA  683

seq1  TGAAGTGTTCCCGTAAAACAGACTGTTGAGAAGGATTCAACTGCATGAAT  739
      |||||||||||||||||||||||||||||||||||||||||| | |||||
seq2  TGAAGTGTTCCCGTAAAACAGACTGTTGAGAAGGATTCAACTTCGTGAAT  733

seq1  TC  741
      ||
seq2  TC  735

seq1: chr13_82135665_82136715
seq2: B6Ng01-083M23.g_75_1125

seq1  GTCTCATCACCTACAACCAACCCTTGGTGATTGCTCCTCTTGGTCCTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCATCACCTACAACCAACCCTTGGTGATTGCTCCTCTTGGTCCTTTT  50

seq1  CAGTCTTTTGTGATAGTTGTGCAAATGTGTGTGAATTAGGTTTCCACTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCTTTTGTGATAGTTGTGCAAATGTGTGTGAATTAGGTTTCCACTGT  100

seq1  GGTCTTGATAATCCTTATTTCTAATTACTATTGATGATAGTGTTTCAATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTTGATAATCCTTATTTCTAATTACTATTGATGATAGTGTTTCAATA  150

seq1  TTCTTATTGGCCATATGTACATATTCTTTGAAAATTCATATTAAAGTCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTATTGGCCATATGTACATATTCTTTGAAAATTCATATTAAAGTCTT  200

seq1  GTTTCATGTCTTTATTGTTTTCTTGTTGGCTGGAAGTTGAACCTTGGTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCATGTCTTTATTGTTTTCTTGTTGGCTGGAAGTTGAACCTTGGTCT  250

seq1  CTGTGTACACAAAGAAAGCATCATTTCATTGAGCTATATATCCTTAGGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTACACAAAGAAAGCATCATTTCATTGAGCTATATATCCTTAGGGC  300

seq1  CCCACTCCCCCATTTTAAAATTACATTGCTTAGCTTTATGTTGTCATTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACTCCCCCATTTTAAAATTACATTGCTTAGCTTTATGTTGTCATTGT  350

seq1  TTCAGGTATTACCTATGCATTTTGCATATTAATACTTTAGTATAACTTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGGTATTACCTATGCATTTTGCATATTAATACTTTAGTATAACTTTT  400

seq1  ACATTTTTCTTTCATTTAGTGGGTTACTTTGAACTCTGTTGATACTATTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTTTCTTTCATTTAGTGGGTTACTTTGAACTCTGTTGATACTATTA  450

seq1  TTTGATATTCAAATTAACAATTTGTCCATTTTTTGGGACTTTGATGTCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGATATTCAAATTAACAATTTGTCCATTTTTTGGGACTTTGATGTCAG  500

seq1  TTAAAAATACTACTATGAAATTTATTGTATTAAGTTTCCTACTTCATATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAATACTACTATGAAATTTATTGTATTAAGTTTCCTACTTCATATA  550

seq1  TTTTCGTCCAAGAATTTTGTAGTTCTACAACTCACAATTAGTTCTCCGAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCGTCCAAGAATTTTGTAGTTCTACAACTCACAATTAGTTCTCCGAT  600

seq1  CCATTTTGCAATAATTAGTTTAGTTAACCAGATAATAATATGGTATTCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTTGCAATAATTAGTTTAGTTAACCAGATAATAATATGGTATTCAT  650

seq1  AAGCATCAAACTTCTATTTTTTTGATTTTAGATATCTAGTTTTTCTGATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCATCAAACTTCTATTTTTTTGATTTTAGATATCTAGTTTTTCTGATG  700

seq1  CCAATTTTCTGAACTATTGCCTTTCTGCCTTGAATGATGTTGGTAGCTGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATTTTCTGAACTATTGCCTTTCTGCCTTGAATGATGTTGGTAGCTGA  750

seq1  CTATTGCTGTGAAGGTTTATTTCTGGGGTCTCTATTCCATTTTATTGGTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTGCTGTGAAGGTTTATTTCTGGGGTCTCTATTCCATTTTATTGGTC  800

seq1  CACATCACAGTCTTTATATCAGGTTAGTGTTCTGTTTGGAATCACTTCAA  850
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  CACATCACAGTCTTTATATCA-GTTAGTGTTCTGTTTGGAATCACTTCAA  849

seq1  TTCTAACTGATCATATCATTCTCTTTGTTCTGATTGTTTAACTCTTGCTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAACTGATCATATCATTCTCTTTGTTCTGATTGTTTAACTCTTGCTT  899

seq1  TTGAGTTTCTATTACACAGCATTCATTGAAC-TTCTT-GGATATT-CCCA  947
      ||||||||||||||||||||||||||||||| ||||| ||||||| ||||
seq2  TTGAGTTTCTATTACACAGCATTCATTGAACTTTCTTGGGATATTCCCCA  949

seq1  ACCATACTTGTCTTTCATTATCTTTGTGATAC-TTTTTATAACTTTCCAA  996
      |||||||||||||||||||||||||||||||| ||||||||||||||| |
seq2  ACCATACTTGTCTTTCATTATCTTTGTGATACTTTTTTATAACTTTCC-A  998

seq1  TATTCTCTGTTCTTTATCTG-TTCT-GGGATTCTCGTAATCTATCTATCT  1044
      || ||||||||||||||||| |||| |||| |||||| ||||||| ||||
seq2  TA-TCTCTGTTCTTTATCTGTTTCTGGGGAGTCTCGT-ATCTATC-ATCT  1045

seq1  ATCTATC  1051
       ||||||
seq2  -TCTATC  1051