BAC Information

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BAC

Clone NameB6Ng01-083P01
Chromosome10 (Build37)
Map Location 30,448,251 - 30,449,060
singlet/doubletsinglet
Overlap geneNcoa7
Upstream geneLOC623064, LOC674389, Gm232, LOC667696, LOC100040542, 2610036L11Rik, LOC212815, Trmt11, Hint3
Downstream geneLOC382354, Hey2, LOC654431, EG432448, Hddc2, Tpd52l1, LOC100041294, Ibrdc1, LOC666055, LOC667752, LOC100040638, Tcba1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-083P01.bB6Ng01-083P01.g
ACCDH898053DH898054
length8541,160
definitionDH898053|Mus musculus domesticus DNA, BAC clone: B6Ng01-083P01, 5' end.DH898054|Mus musculus domesticus DNA, BAC clone: B6Ng01-083P01, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagttctctgcagtgcaaaaataaccagcctagatagatagatag
atagatagatagatagatagatagatagatagatagatagatagatagat
agatatgtatgctgtggctagtatggaaatcagaatcaattctgtggaac
aagggctctcttctcttcttctacccttcatgtggggtctggggaccaaa
ctcaggtatcaggtttttgaagctagcacttctatcaaaaagctacctca
cttgccctgattactaaatctttcaaaattatttaactattaaaaattca
gttgtaaaataatacattttgacccagaggccagccagccaggaggccct
ttcatagcaggagccactgcaatatacaagtatgtggtggagagaccaga
gagaaacgagaagccaaatggtttggccattataaagagaattggagata
ggagggtggagggtgcagaggaatagcctgatgtgagcagtttgaggtca
tgaagtcccagcctgtgctgccagtgagggccatgtctgggttggtggcc
atgcagcagcagggatctgtgttgatgtccatgtctcctattaacaataa
agatcacgtggatatccctggtctggactacctcctgggaccatattgat
atccaggggctgtgcagagctggcctcactctttgctggcttcaacactt
aagaaagtgggccctgtacttcaacttggaagcacagtagagctggctct
gatggtgtgggtgaggggaatccagccccatgggcatgagagcaggagag
ctggtcttgccccctttccagatatggcatttaggtgagccttggggcag
tgct
gaattctcacctgaggactaccgaatggctgagaagcacctgaaaaaatg
ttcagcatccttaatcatcagggaaatgcaaatcaaaacagcccttagat
tccatctcacaccagtcagaatggctaagatcaaaaattcagttgacagc
agatgctggcaaggatgtgaagaaagaggaacactcctccattgctgttg
ggattgcaagctgatacaaccactctggaaatcagcctggcagttcctca
gaaaattggacatagtactactggaggatccaacaatacctctcttgggc
atatatccagaagatgttcaaactggtaagaaagtcacatgttccactat
gttcatagcagcattatttataatagccaggagctggaaagaacccagat
gcccctcaacagaggaatggatacagaatatgtgatacatttatacaatg
gagtactactcagctattaaaaagaatgagtttatgaaattcctaggcaa
atggattgaccttgagggtatcatcctgagtgaggtaatccaatcacaaa
agaactcacatgatatgtactcactgataagtggatattagcccagaagt
ttagaatacccaagatacaagattcaaagcacatgaaactcaagaagaac
gaagaccaaagtatggacactttgccccttcttagaactaggaacaaaac
tcccatggaaggagttacagagacaaagtttggagctgagacaaaaggat
ggaccttttagagactaccatatctgggatccattccataatcagacacc
aaacacagacaccattgcatacactagcaagattttgctgaaaggaccct
gatatagctgtctcttgagactatgctgggggcctagcaaacacagaagt
ggatgctcacagtcagctattgggatggatcacagggcccccaatgcaga
gctagagaaatatccaagagctaaagggatctgcaactctatagtggaac
acatatgactacagtaccccctagagtcatgtctctgctgcatatgtatc
agaagaagctagcagcatcagtggaaaaagagcccattggttcgtacaac
ctttatcgcctcagtacagagacccaaggtcaaaggtggaaaaagagtgg
gtttggggaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_30448251_30449060
seq2: B6Ng01-083P01.b_45_863

seq1  GAATTCAGTTCTCTGCAGTGCAAAAATAACCAGCC--------TAGATAG  42
      |||||||||||||||||||||||||||||||||||        |||||||
seq2  GAATTCAGTTCTCTGCAGTGCAAAAATAACCAGCCTAGATAGATAGATAG  50

seq1  ATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGAT  92
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGAT  100

seq1  AGATATGTATGCTGTGGCTAGTATGGAAATCAGAATCAATTCTGTGGAAC  142
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATATGTATGCTGTGGCTAGTATGGAAATCAGAATCAATTCTGTGGAAC  150

seq1  AAGGGCTCTCTTCTCTTCTTCTACCCTTCATGTGGGGTCTGGGGACCAAA  192
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGCTCTCTTCTCTTCTTCTACCCTTCATGTGGGGTCTGGGGACCAAA  200

seq1  CTCAGGTATCAGGTTTTTGAAGCTAGCACTTCTATCAAAAAGCTACCTCA  242
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGGTATCAGGTTTTTGAAGCTAGCACTTCTATCAAAAAGCTACCTCA  250

seq1  CTTGCCCTGATTACTAAATCTTTCAAAATTATTTAACTATTAAAAATTCA  292
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCCCTGATTACTAAATCTTTCAAAATTATTTAACTATTAAAAATTCA  300

seq1  GTTGTAAAATAATACATTTTGACCCAGAGGCCAGCCAGCCAGGAGGCCCT  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTAAAATAATACATTTTGACCCAGAGGCCAGCCAGCCAGGAGGCCCT  350

seq1  TTCATAGCAGGAGCCACTGCAATATACAAGTATGTGGTGGAGAGACCAGA  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATAGCAGGAGCCACTGCAATATACAAGTATGTGGTGGAGAGACCAGA  400

seq1  GAGAAACGAGAAGCCAAATGGTTTGGCCATTATAAAGAGAATTGGAGATA  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAACGAGAAGCCAAATGGTTTGGCCATTATAAAGAGAATTGGAGATA  450

seq1  GGAGGGTGGAGGGTGCAGAGGAATAGCCTGATGTGAGCAGTTTGAGGTCA  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGGTGGAGGGTGCAGAGGAATAGCCTGATGTGAGCAGTTTGAGGTCA  500

seq1  TGAAGTCCCAGCCTGTGCTGCCAGTGAGGGCCATGTCTGGGTTGGTGGCC  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGTCCCAGCCTGTGCTGCCAGTGAGGGCCATGTCTGGGTTGGTGGCC  550

seq1  ATGCAGCAGCAGGGATCTGTGTTGATGTCCATGTCTCCTATTAACAATAA  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAGCAGCAGGGATCTGTGTTGATGTCCATGTCTCCTATTAACAATAA  600

seq1  AGATCACGTGGATATCCCTGGTCTGGACTACCTCCTGGGACCATATTGAT  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCACGTGGATATCCCTGGTCTGGACTACCTCCTGGGACCATATTGAT  650

seq1  ATCCAGGGGCTGTGCAGAGCTGGCCTCACTCTTTGCTGGCTTCAACACTT  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAGGGGCTGTGCAGAGCTGGCCTCACTCTTTGCTGGCTTCAACACTT  700

seq1  AAGAAAGTGGGCCCTGTACTTCAACTTGGAAGCACAGTAGAGCTGGCTCT  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAGTGGGCCCTGTACTTCAACTTGGAAGCACAGTAGAGCTGGCTCT  750

seq1  GATGGTGTGGGTGAGGGGAATCCAGCCCCATGGGCATGAGAGCAGGAGAG  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGTGTGGGTGAGGGGAATCCAGCCCCATGGGCATGAGAGCAGGAGAG  800

seq1  CTGGTCTTG-CCCCTTTCC  810
      ||||||||| |||||||||
seq2  CTGGTCTTGCCCCCTTTCC  819