BAC Information

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BAC

Clone NameB6Ng01-083P22
Chromosome10 (Build37)
Map Location 89,800,937 - 89,931,250
singlet/doubletdoublet
Overlap geneAnks1b
Upstream geneGas2l3, Nr1h4, EG627532, Slc17a8, Scyl2, Actr6, E030041M21Rik, E530015N03Rik, LOC100043039, LOC544719
Downstream geneApaf1, 1200009F10Rik, Slc25a3, Tmpo, LOC100041769
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-083P22.bB6Ng01-083P22.g
ACCDH898090DH898091
length1,203900
definitionDH898090|Mus musculus domesticus DNA, BAC clone: B6Ng01-083P22, 5' end.DH898091|Mus musculus domesticus DNA, BAC clone: B6Ng01-083P22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(89,800,937 - 89,802,149)(89,930,352 - 89,931,250)
sequence
gaattctccctgaaagtttctacttaaagtggttgctgcaattatcaaac
tttgattaaatgattttattttctttatttcctcctaaaccaaatggttc
tccctttgttccatctctttccgctgtagaacacaatgcatctgtgaggt
tctatgcatttacatggaagctgacattctgctattattatttttattat
tttattttctattatttgaacatgcagatctttcagttactttctaccca
tcaaagatcttacaacaaagaaaataaccacatctttatcttaaattaga
cattatcctaatataattaatgtatgatcaatgtaataatctatgaatta
tcccagttaaaccaaacagtgatttcttgggggaaaatatgcattacttc
catttcagctatatagatactcaactataaatattgttgttaagatttca
acctaattttactttgctccaaatctgatttgattttcttaatatatgat
gaatttacagaaaaaaaaatatgtcatttaaatttaatatacaaatgaat
tgaatatttgttctatttgttcactgatacaaaggtgaagaaacagactt
tagagttacaggggacattaaaacttaccagcactttgtccttaagagaa
attcacacaaaactatatgctactctggcaaatttttgattacttagaaa
ttgattactttctgagtcactttctttatgcatttgctttatatctatat
gacagtgcattttgaacatttttctgaggcatggttcagagagaaaacaa
aaactttaagtaggtattttgctaagtgtttttgaaaataacttagcaga
aaaattagaaaccatgagctagaatcaattttaatatcatctttatttaa
taatatctatcatctaatgacaacaactgctatgccactgactacactac
agtttacttcaatgaatgctacatgtactttagtctaaactcatgtcatc
ttgatgacccatagaagtgcattagtcactgagtttctggctaccacata
tactctcattctaacatagtaatccttaatgatactttcctgccatgctt
ataaagtaccaatgggcagtggaattcgtttgaaactagcatgtcttcat
tcatagaaagcctgcatggtacagtcgatataatgtcacactggtacaat
ggc
gaattccagcccagggaatggtgacacccatagtgggcattaacctaatg
aagaccccccttacccccaacacatccataggcatgctcatctggttttt
ttttttttttttttggtttttcaagaccgggtttctctgtgtatccctgg
ctgtcctggaactcactctgtagaccaggctggcctcgaactcacaaatc
tgcctgcctctgcctcccaagtgctgggattaaaggtgtgcttcaccact
gtccagctggcatgctcatctcttaggtgattctagagggcatcccctgg
aattaacaattaaaatttaccactacacacacacacacacacacacacac
acacacacacagagtgagagagatagggagacatacaccaaactggaaaa
aagttgctaatatctaacaatctatgtgacttattaattaaagaaacata
cattaaactgataaatggagaaagagaagtactttaagcatgaataaagt
ataagccctctggaaagaaagagtctttctttgtcatggctaatacagat
ctctaaatattaaacatatctaaaattactagtctttcttttgctttata
ttgcctcacattaatctatatctagagcccctagcattatatatagagag
cacattgtgcttctggtcttaatccttggaatactggtcttactccttca
aaggacactgcacctcctgaagagagaggtcatggtctgtgagtcttgct
atccataggcaaaaaggtgccttttgcaggccatggagcagctgcatgct
gaactgacctgggtgctagatggctgatagacacatctgagagacgatct
ctagcttttatgaaaatgaaaagctgatttaccatctctgtggagtggat

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_89800937_89802149
seq2: B6Ng01-083P22.b_46_1248

seq1  GAATTCTCCCTGAAAGTTTCTACTTAAAGTGGTTGCTGCAATTATCAAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCCTGAAAGTTTCTACTTAAAGTGGTTGCTGCAATTATCAAAC  50

seq1  TTTGATTAAATGATTTTATTTTCTTTATTTCCTCCTAAACCAAATGGTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGATTAAATGATTTTATTTTCTTTATTTCCTCCTAAACCAAATGGTTC  100

seq1  TCCCTTTGTTCCATCTCTTTCCGCTGTAGAACACAATGCATCTGTGAGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTTTGTTCCATCTCTTTCCGCTGTAGAACACAATGCATCTGTGAGGT  150

seq1  TCTATGCATTTACATGGAAGCTGACATTCTGCTATTATTATTTTTATTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATGCATTTACATGGAAGCTGACATTCTGCTATTATTATTTTTATTAT  200

seq1  TTTATTTTCTATTATTTGAACATGCAGATCTTTCAGTTACTTTCTACCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTTCTATTATTTGAACATGCAGATCTTTCAGTTACTTTCTACCCA  250

seq1  TCAAAGATCTTACAACAAAGAAAATAACCACATCTTTATCTTAAATTAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGATCTTACAACAAAGAAAATAACCACATCTTTATCTTAAATTAGA  300

seq1  CATTATCCTAATATAATTAATGTATTATCAATGTAATAATCTATGAATTA  350
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  CATTATCCTAATATAATTAATGTATGATCAATGTAATAATCTATGAATTA  350

seq1  TCCCAGTTAAACCAAACAGTGATTTCTTGGGGGAAAATATGCATTACTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGTTAAACCAAACAGTGATTTCTTGGGGGAAAATATGCATTACTTC  400

seq1  CATTTCAGCTATATAGATACTCAACTATAAATATTGTTGTTAAGATTTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCAGCTATATAGATACTCAACTATAAATATTGTTGTTAAGATTTCA  450

seq1  ACCTAATTTTACTTTGCTCCAAATCTGATTTGATTTTCTTAATATATGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTAATTTTACTTTGCTCCAAATCTGATTTGATTTTCTTAATATATGAT  500

seq1  GAATTTACAGAAAAAAAAATATGTCATTTAAATTTAATATACAAATGAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTACAGAAAAAAAAATATGTCATTTAAATTTAATATACAAATGAAT  550

seq1  TGAATATTTGTTCTATTTGTTCACTGATACAAAGGTGAAGAAACAGACTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATATTTGTTCTATTTGTTCACTGATACAAAGGTGAAGAAACAGACTT  600

seq1  TAGAGTTACAGGGGACATTAAAACTTACCAGCACTTTTTCCTTAAGAGAA  650
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  TAGAGTTACAGGGGACATTAAAACTTACCAGCACTTTGTCCTTAAGAGAA  650

seq1  ATTCACACAAAACTATATGCTACTCTGGCAAATTTTTGATTACTTAGAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCACACAAAACTATATGCTACTCTGGCAAATTTTTGATTACTTAGAAA  700

seq1  TTGATTACTTTCTGAGTCACTTTCTTTATGCATTTGCTTTATATCTATAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATTACTTTCTGAGTCACTTTCTTTATGCATTTGCTTTATATCTATAT  750

seq1  GACAGTGCATTTTGAACATTTTTCAGGAGGCATGGTTCAGAGAGAAAACA  800
      ||||||||||||||||||||||||  ||||||||||||||||||||||||
seq2  GACAGTGCATTTTGAACATTTTTC-TGAGGCATGGTTCAGAGAGAAAACA  799

seq1  AAAACTTTAAGTAGGTATTTTGCTAAGTGTTTTTGAAAATAACTTAGCAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTTTAAGTAGGTATTTTGCTAAGTGTTTTTGAAAATAACTTAGCAG  849

seq1  AAAAATTAGAAACCATGAGCTAGAATCAATTTTAATATCATCTTTATTTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATTAGAAACCATGAGCTAGAATCAATTTTAATATCATCTTTATTTA  899

seq1  ATAATATCTATCATCTAATGACAACAACTGCTATGCCACTGACTACAACT  950
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  ATAATATCTATCATCTAATGACAACAACTGCTATGCCACTGACTAC-ACT  948

seq1  ACAATTTACTTCAATGAATGTTACATGTA-TTTATTCTAAACTTCATGTC  999
      ||| |||||||||||||||| |||||||| |||| ||||||| |||||||
seq2  ACAGTTTACTTCAATGAATGCTACATGTACTTTAGTCTAAAC-TCATGTC  997

seq1  ATCTTGATGACCCATAGAAGTGCATT-GTCACTTGTGTTTCTGGCTTACA  1048
      |||||||||||||||||||||||||| ||||| || ||||||||||  ||
seq2  ATCTTGATGACCCATAGAAGTGCATTAGTCAC-TGAGTTTCTGGCTACCA  1046

seq1  CTTTTACTCTC-TTCTAACATAGTATTCCTTAATGATAACTTTCCTGGCA  1097
      | | ||||||| ||||||||||||| ||||||||||| |||||||| || 
seq2  CATATACTCTCATTCTAACATAGTAATCCTTAATGAT-ACTTTCCT-GCC  1094

seq1  ATGGCCTTTATAAA-TACCA--TGGCAGTTAGATTC-TTTTAAACTATCA  1143
      |||    ||||||| |||||   ||||||   |||| ||| |||||| ||
seq2  ATG---CTTATAAAGTACCAATGGGCAGTGGAATTCGTTTGAAACTAGCA  1141

seq1  TTTCCTTATTCATAAGAAAGCCTGGCTATTTGTACATTTTAAATAATTAT  1193
      | || | |||||| ||||||||||     | ||||| |  | |||   ||
seq2  TGTCTTCATTCAT-AGAAAGCCTG---CATGGTACAGTCGATATA---AT  1184

seq1  AGCAAACATGGTACAATGGC  1213
        || || ||||||||||||
seq2  GTCACAC-TGGTACAATGGC  1203

seq1: chr10_89930352_89931250
seq2: B6Ng01-083P22.g_67_966 (reverse)

seq1  ATCCACACCACAGAGCTGGTTTATTTAGCTTTTCTTTTTCATAAAAGCTT  50
      |||||| |||||||| ||| | | | |||||||| ||||||||||||| |
seq2  ATCCACTCCACAGAGATGG-TAAATCAGCTTTTCATTTTCATAAAAGC-T  48

seq1  TGAGATCGTCTCTCAGCTGTGTTTGTCAGGCACCTAGCAACCAGGTCAGT  100
       ||||||||||||||| ||||| | |||| || |||||| ||||||||||
seq2  AGAGATCGTCTCTCAGATGTGTCTATCAGCCATCTAGCACCCAGGTCAGT  98

seq1  T-AGCATGCAGCTG-TTCATGGCCTTCACTAGGCACCATGCTGCCTACTG  148
      | |||||||||||| | |||||||| ||  ||||||| |  ||||||  |
seq2  TCAGCATGCAGCTGCTCCATGGCCTGCAAAAGGCACCTTTTTGCCTATGG  148

seq1  AAAACAAGA-ACAAAGACCATGACCTCTCTCTTCAGGAGGTGCATTGTCC  197
      | | |||||  || |||||||||||||||||||||||||||||| |||||
seq2  ATAGCAAGACTCACAGACCATGACCTCTCTCTTCAGGAGGTGCAGTGTCC  198

seq1  TTTGAAGGAGTAAGACCAGTATTACAAGGAATAAGACCAGAAGTACAATG  247
      ||||||||||||||||||||||| |||||| |||||||||||| ||||||
seq2  TTTGAAGGAGTAAGACCAGTATTCCAAGGATTAAGACCAGAAGCACAATG  248

seq1  TGCTCTCTATATATAATGCTAGGGGCTCTAGAT-TAGATTAATGTGAGGC  296
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TGCTCTCTATATATAATGCTAGGGGCTCTAGATATAGATTAATGTGAGGC  298

seq1  AATATAAAGCAAAAGAAAGACTAGTAATAGATAGATATGTTTAATATTTA  346
      ||||||||||||||||||||||||||||   |||||||||||||||||||
seq2  AATATAAAGCAAAAGAAAGACTAGTAAT-TTTAGATATGTTTAATATTTA  347

seq1  GAGAATTGTATTAGCCATGACAAAGAAAGACTCTTTCTTTCCAGAGGGCT  396
      ||||  ||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATCTGTATTAGCCATGACAAAGAAAGACTCTTTCTTTCCAGAGGGCT  397

seq1  TATACTTTATTCATGCTTAAAGTACTTCTCTTTCTCCATTTATCAGTTTA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACTTTATTCATGCTTAAAGTACTTCTCTTTCTCCATTTATCAGTTTA  447

seq1  ATGTATGTTTCTTTAATTAATAAGTCAGCTAGATTGTTAGATATTAGCAA  496
      |||||||||||||||||||||||||||  |||||||||||||||||||||
seq2  ATGTATGTTTCTTTAATTAATAAGTCACATAGATTGTTAGATATTAGCAA  497

seq1  CTTTTTTCCAGTTCTGTGTCTGTCTGCCTATCTCTCTCACTCTGTGTGTG  546
      |||||||||||||  |||| ||||| ||||||||||||||||||||||||
seq2  CTTTTTTCCAGTTTGGTGTATGTCTCCCTATCTCTCTCACTCTGTGTGTG  547

seq1  TGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGTGGTTAATTTTAATTGTTA  596
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGTGGTAAATTTTAATTGTTA  597

seq1  ATTCCAGAGGATGACCTCTAGAATCACCTAAGAGATGAGCATGCCAGCTG  646
      ||||||| ||||| ||||||||||||||||||||||||||||||||||||
seq2  ATTCCAGGGGATGCCCTCTAGAATCACCTAAGAGATGAGCATGCCAGCTG  647

seq1  GACAGTGGTGAAGCACACCTTTAATCCCAGCACTTGGGAGGCAGAGGCAG  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGTGGTGAAGCACACCTTTAATCCCAGCACTTGGGAGGCAGAGGCAG  697

seq1  GCAGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAGAGTGAGTTCCAGGA  746
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  GCAGATTTGTGAGTTCGAGGCCAGCCTGGTCTACAGAGTGAGTTCCAGGA  747

seq1  CAGCCAGGGATACACAGAGAAACCCTGTCTTGAAAAACCAAAAAAAAAAA  796
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  CAGCCAGGGATACACAGAGAAACCCGGTCTTGAAAAACCAAAAAAAAAAA  797

seq1  AAAAAAAACCAGATGAGCATGCCTATGGATGTGTTGGGGGTAAGGGGGGT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAACCAGATGAGCATGCCTATGGATGTGTTGGGGGTAAGGGGGGT  847

seq1  CTTCATTAGGTTAATGCCCACTATGGGTGTCACCATTCCCTGGGCTGGAA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCATTAGGTTAATGCCCACTATGGGTGTCACCATTCCCTGGGCTGGAA  897

seq1  TTC  899
      |||
seq2  TTC  900