BAC Information

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BAC

Clone NameB6Ng01-084C10
Chromosome10 (Build37)
Map Location 48,575,884 - 48,576,470
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042398, LOC546562, LOC100041689
Downstream geneGrik2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-084C10.bB6Ng01-084C10.g
ACCDH898199DH898200
length1,166587
definitionDH898199|Mus musculus domesticus DNA, BAC clone: B6Ng01-084C10, 5' end.DH898200|Mus musculus domesticus DNA, BAC clone: B6Ng01-084C10, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctgtttatctcccttccttattttttaatggtgttatattgttct
ctgaagtctaacttcttgagttctttgtatatattgactattagccctct
atcagatgtaggattggtaaaaatttccacagtctgttggttgccatttt
gtcctattgacagtgtcctttgccttacagaagctttgcaatttaatgag
gtcccatttgtagattgttgatcttagaacataagccattgttgttctgt
tcagaaacacttcctctgtgcccatgtgttccagaattttccccactttc
tcttctattacattcagtgcctgcttttatgtggaggtctttgatcctct
tggatttgagctttgcacagggagataagaatggatgaattcccattctt
ctttatgataactgccagttgaaccagcaccatttgttgacaatgctgtc
ttttttccactggatggttttagctcctttgtcaaaaatcaagcggccat
gggtgtgtgagttcttttatggattgttggttgttgatttcagccctgaa
tttgatttatttcctgctgtctcctgcccttaggtgtgtttgcttctttt
tgttctagagctttcagatgtactgttaagctgctactatatttttggaa
gcactcagagctaagagttatcctcttagcactaacttcattgtatccca
taattttgggtatgttgtactttcattttcattaaattctaaaacatctt
taatttctttttttatttcttcctcgacaggattatcactgagtagatca
ttgttaagcttccatgcttatgtgggctttctgttatttttttgctattg
aagactagccttaatctgaagtgatcttttaggagtcatgggattatttc
aatcttcttatatcttttagattattttaatcttcttatgtatgttctta
tttgtgactgattatatggtcagttttagagaaggaacacgggtgttgaa
aaagtatattcttttgatttagcatggaatgctctcttgaaatctgtaaa
tccatgtgtcataccttctgttagtttcactggtctcatttaatttgggt
ttccatgatgggctatgatgagaagtaaggggggtggaagcctcccacat
taatggtgagttgcaa
gaattcataagtatcctcatagtggtgtgcaaataatgtttgttttatta
tagggactgaaaaaaataaaaataacacaaggtgtcagagaccatcctgt
gagaaagcaagcccttcacaatctctctaacaggccaaatggcctcgtgc
taggatctggttatcaccccctcctccctattcccttcctggcacctgaa
gctgtaaaagctgaattatagtctctcttccctatctcttcccaaactcc
catgccatccaaggacatgagtgacgcctgagcctgcctgacacccaagg
ctgcaaaggaggatctatggagatctgacttgtgaaattacatgggatgt
ttaaagactcagagtccaaatatgagctttctgttgttttgaactaggat
gctgtgatatttagtcaggtggagcagaaaagttagtcatgcttaacaag
tgaccagcctgactgaagtgaagacctttaaattgatgttgtgttgaaat
cccagctcacatcaagtctgaccatatcaggccaatacagttctacatgg
cagaggtttattatggtgagggtgtgggggaaggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_48575884_48576470
seq2: B6Ng01-084C10.g_70_656 (reverse)

seq1  CCCCCTTCCCCCACACCCTCACCATAATAAACCTCTGCCATGTAGAACTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCTTCCCCCACACCCTCACCATAATAAACCTCTGCCATGTAGAACTG  50

seq1  TATTGGCCTGATATGGTCAGACTTGATGTGAGCTGGGATTTCAACACAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGGCCTGATATGGTCAGACTTGATGTGAGCTGGGATTTCAACACAAC  100

seq1  ATCAATTTAAAGGTCTTCACTTCAGTCAGGCTGGTCACTTGTTAAGCATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAATTTAAAGGTCTTCACTTCAGTCAGGCTGGTCACTTGTTAAGCATG  150

seq1  ACTAACTTTTCTGCTCCACCTGACTAAATATCACAGCATCCTAGTTCAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAACTTTTCTGCTCCACCTGACTAAATATCACAGCATCCTAGTTCAAA  200

seq1  ACAACAGAAAGCTCATATTTGGACTCTGAGTCTTTAAACATCCCATGTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACAGAAAGCTCATATTTGGACTCTGAGTCTTTAAACATCCCATGTAA  250

seq1  TTTCACAAGTCAGATCTCCATAGATCCTCCTTTGCAGCCTTGGGTGTCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCACAAGTCAGATCTCCATAGATCCTCCTTTGCAGCCTTGGGTGTCAG  300

seq1  GCAGGCTCAGGCGTCACTCATGTCCTTGGATGGCATGGGAGTTTGGGAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGCTCAGGCGTCACTCATGTCCTTGGATGGCATGGGAGTTTGGGAAG  350

seq1  AGATAGGGAAGAGAGACTATAATTCAGCTTTTACAGCTTCAGGTGCCAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAGGGAAGAGAGACTATAATTCAGCTTTTACAGCTTCAGGTGCCAGG  400

seq1  AAGGGAATAGGGAGGAGGGGGTGATAACCAGATCCTAGCACGAGGCCATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGAATAGGGAGGAGGGGGTGATAACCAGATCCTAGCACGAGGCCATT  450

seq1  TGGCCTGTTAGAGAGATTGTGAAGGGCTTGCTTTCTCACAGGATGGTCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCTGTTAGAGAGATTGTGAAGGGCTTGCTTTCTCACAGGATGGTCTC  500

seq1  TGACACCTTGTGTTATTTTTATTTTTTTCAGTCCCTATAATAAAACAAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACACCTTGTGTTATTTTTATTTTTTTCAGTCCCTATAATAAAACAAAC  550

seq1  ATTATTTGCACACCACTATGAGGATACTTATGAATTC  587
      |||||||||||||||||||||||||||||||||||||
seq2  ATTATTTGCACACCACTATGAGGATACTTATGAATTC  587