BAC Information

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BAC

Clone NameB6Ng01-084D12
Chromosome10 (Build37)
Map Location 109,462,305 - 109,614,986
singlet/doubletdoublet
Overlap geneLOC100042502
Upstream geneNav3, LOC100042497
Downstream geneLOC100042506, LOC100042510, LOC667855, 9230102K24Rik, LOC100042518, E2f7, Csrp2, Zdhhc17, EG432502, LOC667904, Osbpl8
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-084D12.bB6Ng01-084D12.g
ACCDH898245DH898246
length9111,155
definitionDH898245|Mus musculus domesticus DNA, BAC clone: B6Ng01-084D12, 5' end.DH898246|Mus musculus domesticus DNA, BAC clone: B6Ng01-084D12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(109,614,444 - 109,614,986)(109,462,305 - 109,463,485)
sequence
gaattcaaagagtccaccttcagcagatagacagggcctcaagtggaggg
actgggttactaacccacagtgaaaatttctgacccagaactgttcttgt
ctaaaagaactgcagagacaaaaatggagaacagattgcagcaaaggctg
tccagtgacctgcccaaattatgatccatctcctgtggaggaggagagac
caaggactgacactatgaatgatgctatgctgtgcatacagacaggaacc
tggcatggctgtcctttgagagaccctgactgagacagatgcagatactt
acagtcaaccactggactgatgtcagggacccctatggttgaattgggga
aaggttgaagaagctgaaggggagggtgaccccatagaaagaccagcggt
ctcaactaacccagacccctgggagctccccaagactgagccagcaaaca
ggagcttcctctggctggtctgaggccctggactcttacatagcagaggt
ctgcctagtctggcctcagtgggagaagatgcacttaatcttcaagagac
ttgaggcccagagaagggggaggtctggtgaggggggagagtacctaccc
tcttggaggcaaggcggaggaacagtaggatgaggaactgtagaaggggg
accaggaagaggggaaactactgaaatgtaaataaataaaataattaaaa
aaacaaaacaagagataataatagcaagttgaccatattctagaagcagt
ggaacaaaaatgcagaaaagaaaatggaaagattcaaagtgatggactca
caatcatgccaggagttatcactaatgatctgacttctcaagaagtaaat
gattctctgtgtatatttacagtttgaaagatgagaaaagagccgcgggg
gggggggggtt
gaattcttctgacaaatggagattctacagatagttaaaagttacactca
tacaagaaattatcagggcccaggaaatagggggcttgtggtattgcagt
attcatgagaaggtctgctagagcagaacccctgggggtgggcttaacaa
tagactagctttacacctggctcccttccttcttttgatgtattcctttt
gtattgtgtcaatgtaacttgtaactcgcctggtttcttgttattcttct
gtataaaaagtttgatgctggacttgacaaaataaattcagattctatac
aatctcctgtgtgcatctgtctgtcattttcgccaactccttgcccatct
gaacccagagacccgtccacgcagacaaagggacccagagggtctgcggc
aaaagcagaacccaataggatttgaatactaatatacaccggaaaatacc
atgtagatgttcatagttaaagatgatactgaaataatggaaggtaggaa
ttaaaaaaaaaaagataaattctatttaacagagagagataacaaagaac
caagaagagaaattaacatttaatttattttgtaaattatatctatgcat
tattttatatacatatgcatggggggctacatgcatgtgacttcaagtgc
tcttgagaccacaaggggacattgaatgccctggtatcagcattacaagt
agatgatatgggtgcttggaatgaaactctggtcccctagaagaacaata
tgtactcttaactacagggtcatttctctagcctctagaaatatgaattc
aaaactcaattatttttttcacgttttacatgattgtgaaattgctagtt
atttcttaacatagaaaaacaagtgaaaaccaaacaaatttgacagaaag
aaagacttagacaaaacctagataatgagtttagttttaatttttgccat
tatagttacagtggctagaatgaatatttgtaaaatgtagaaataacaca
gagtactgaatgagatattatagaaacacatttcctggcatttaactacc
atgtcatagtttactgattggtttcagatgcattagctcctagaaagaca
gttcaataaccttctgctgctgtgagaagacttattggagttcaggcaca
cttta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_109614444_109614986
seq2: B6Ng01-084D12.b_413_956 (reverse)

seq1  -AACCCCCCCCCCCCGCGGCTCTTTTCTCATCTTTCAAACTGTAAATATA  49
       | |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCCCCCCCCCCCGCGGCTCTTTTCTCATCTTTCAAACTGTAAATATA  50

seq1  CACAGAGAATCATTTACTTCTTGAGAAGTCAGATCATTAGTGATAACTCC  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGAGAATCATTTACTTCTTGAGAAGTCAGATCATTAGTGATAACTCC  100

seq1  TGGCATGATTGTGAGTCCATCACTTTGAATCTTTCCATTTTCTTTTCTGC  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCATGATTGTGAGTCCATCACTTTGAATCTTTCCATTTTCTTTTCTGC  150

seq1  ATTTTTGTTCCACTGCTTCTAGAATATGGTCAACTTGCTATTATTATCTC  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTGTTCCACTGCTTCTAGAATATGGTCAACTTGCTATTATTATCTC  200

seq1  TTGTTTTGTTTTTTTAATTATTTTATTTATTTACATTTCAGTAGTTTCCC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTTGTTTTTTTAATTATTTTATTTATTTACATTTCAGTAGTTTCCC  250

seq1  CTCTTCCTGGTCCCCCTTCTACAGTTCCTCATCCTACTGTTCCTCCGCCT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCCTGGTCCCCCTTCTACAGTTCCTCATCCTACTGTTCCTCCGCCT  300

seq1  TGCCTCCAAGAGGGTAGGTACTCTCCCCCCTCACCAGACCTCCCCCTTCT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTCCAAGAGGGTAGGTACTCTCCCCCCTCACCAGACCTCCCCCTTCT  350

seq1  CTGGGCCTCAAGTCTCTTGAAGATTAAGTGCATCTTCTCCCACTGAGGCC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGCCTCAAGTCTCTTGAAGATTAAGTGCATCTTCTCCCACTGAGGCC  400

seq1  AGACTAGGCAGACCTCTGCTATGTAAGAGTCCAGGGCCTCAGACCAGCCA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTAGGCAGACCTCTGCTATGTAAGAGTCCAGGGCCTCAGACCAGCCA  450

seq1  GAGGAAGCTCCTGTTTGCTGGCTCAGTCTTGGGGAGCTCCCAGGGGTCTG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAAGCTCCTGTTTGCTGGCTCAGTCTTGGGGAGCTCCCAGGGGTCTG  500

seq1  GGTTAGTTGAGACCGCTGGTCTTTCTATGGGGTCACCCTCCCCT  543
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTAGTTGAGACCGCTGGTCTTTCTATGGGGTCACCCTCCCCT  544

seq1: chr10_109462305_109463485
seq2: B6Ng01-084D12.g_70_1224

seq1  GAATTCTTCTGACAAATGGAGATTCTACAGATAGTTAAAAGTTACACTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCTGACAAATGGAGATTCTACAGATAGTTAAAAGTTACACTCA  50

seq1  TACAAGAAATTATCAGGGCCCAGGAAATAGGGGGCTTGTGGTATTGCAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAGAAATTATCAGGGCCCAGGAAATAGGGGGCTTGTGGTATTGCAGT  100

seq1  ATTCATGAGAAGGTCTGCTAGAGCAGAACCCCTGGGGGTGGGCTTAACAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATGAGAAGGTCTGCTAGAGCAGAACCCCTGGGGGTGGGCTTAACAA  150

seq1  TAGACTAGCTTTACACCTGGCTCCCTTCCTTCTTTTGATGTATTCCTTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACTAGCTTTACACCTGGCTCCCTTCCTTCTTTTGATGTATTCCTTTT  200

seq1  GTATTGTGTCAATGTAACTTGTAACTCGCCTGGTTTCTTGTTATTCTTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTGTGTCAATGTAACTTGTAACTCGCCTGGTTTCTTGTTATTCTTCT  250

seq1  GTATAAAAAGTTTGATGCTGGACTTGACAAAATAAATTCAGATTCTATAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATAAAAAGTTTGATGCTGGACTTGACAAAATAAATTCAGATTCTATAC  300

seq1  AATCTCCTGTGTGCATCTGTCTGTCATTTTCGCCAACTCCTTGCCCATCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTCCTGTGTGCATCTGTCTGTCATTTTCGCCAACTCCTTGCCCATCT  350

seq1  GAACCCAGAGACCCGTCCACGCAGACAAAGGGACCCAGAGGGTCTGCGGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCCAGAGACCCGTCCACGCAGACAAAGGGACCCAGAGGGTCTGCGGC  400

seq1  AAAAGCAGAACCCAATAGGATTTGAATACTAATATACACCGGAAAATACC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGCAGAACCCAATAGGATTTGAATACTAATATACACCGGAAAATACC  450

seq1  ATGTAGATGTTCATAGTTAAAGATGATACTGAAATAATGGAAGGTAGGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAGATGTTCATAGTTAAAGATGATACTGAAATAATGGAAGGTAGGAA  500

seq1  TTAAAAAAAAAAAGATAAATTCTATTTAACAGAGAGAGATAACAAAGAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAAAAAAAAGATAAATTCTATTTAACAGAGAGAGATAACAAAGAAC  550

seq1  CAAGAAGAGAAATTAACATTTAATTTATTTTGTAAATTATATCTATGCAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAAGAGAAATTAACATTTAATTTATTTTGTAAATTATATCTATGCAT  600

seq1  TATTTTATATACATATGCATGGGGGGCTACATGCATGTGACTTCAAGTGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTATATACATATGCATGGGGGGCTACATGCATGTGACTTCAAGTGC  650

seq1  TCTTGAGACCACAAGGGGACATTGAATGCCCTGGTATCAGCATTACAAGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGAGACCACAAGGGGACATTGAATGCCCTGGTATCAGCATTACAAGT  700

seq1  AGATGATATGGGTGCTTGGAATGAAACTCTGGTCCCCTAGAAGAACAATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGATATGGGTGCTTGGAATGAAACTCTGGTCCCCTAGAAGAACAATA  750

seq1  TGTACTCTTAACTACAGGGTCATTTCTCTAGCCTCTAGAAATATGAATTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACTCTTAACTACAGGGTCATTTCTCTAGCCTCTAGAAATATGAATTC  800

seq1  AAAACTCAATTATTTTTTTCACGTTTTACATGATTGTGAAATTGCTAGTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTCAATTATTTTTTTCACGTTTTACATGATTGTGAAATTGCTAGTT  850

seq1  ATTTCTTAACATAGAAAAACAAGTGAAAACCAAACAAATTTGACAGAAAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTTAACATAGAAAAACAAGTGAAAACCAAACAAATTTGACAGAAAG  900

seq1  AAAAGACTTAGACAAAAACCTAGATAATGAGTTTTAGTTTTAATTTTTGC  950
       |||||||||||| ||||||||||||||||| ||||||||||||||||||
seq2  -AAAGACTTAGAC-AAAACCTAGATAATGAG-TTTAGTTTTAATTTTTGC  947

seq1  CAATTTATAGTTACAGTGGCTAGAATGAAATATTTGTAAAAATGTAGGAA  1000
      ||  ||||||||||||||||||||||| ||||||||| |||||||| |||
seq2  CA--TTATAGTTACAGTGGCTAGAATG-AATATTTGT-AAAATGTA-GAA  992

seq1  ATAAACAACAGAGTACTGAATGAAGATATTTAATAAGAAACACATTTCCT  1050
      ||||   ||||||||||||||| |||||||  || |||||||||||||||
seq2  ATAA--CACAGAGTACTGAATG-AGATATT--AT-AGAAACACATTTCCT  1036

seq1  GGCATTTAAACTACAATGTCATAGTTTTACTTGATTGGTTTCCAGAATGC  1100
      ||||||| |||||| ||||||||| ||||| |||||||||| ||| ||||
seq2  GGCATTT-AACTACCATGTCATAG-TTTAC-TGATTGGTTT-CAG-ATGC  1081

seq1  ATTAGCTCTTAGAAAGGACAGTCCATTAAACCTCTGCTTGCCTGTAAGAA  1150
      |||||||| |||||| |||||| || ||| | ||||||   |||| ||||
seq2  ATTAGCTCCTAGAAA-GACAGTTCAATAACCTTCTGCT--GCTGTGAGAA  1128

seq1  GACTCTAAGTGGGAGTCCAGGCACACCTTTA  1181
      |||| ||  | ||||| |||||||| |||||
seq2  GACT-TA--TTGGAGTTCAGGCACA-CTTTA  1155