BAC Information

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BAC

Clone NameB6Ng01-084F19
Chromosome10 (Build37)
Map Location 110,976,028 - 110,977,174
singlet/doubletsinglet
Overlap genenone
Upstream gene9230102K24Rik, LOC100042518, E2f7, Csrp2, Zdhhc17, EG432502, LOC667904, Osbpl8, Bbs10, Nap1l1, EG382421, Phlda1
Downstream geneKrr1, Glipr1, EG639527, Glipr1l1, Glipr1l2, LOC627895, Glipr1l3, Caps2, Kcnc2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-084F19.b
ACCDH898345
length1,133
definitionDH898345|Mus musculus domesticus DNA, BAC clone: B6Ng01-084F19, 5' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
aagtgccttgaggagaagccaggctgcagtgggcggcacagatgctaaca
tcctgccagctgaactcctgagtggaagaactaagagtctgttcaaaccc
tgaggaaaggctcagctcctgggcctggcaggctatgctgagcagcctca
ggcaggataggcttcactgacatcacagtcccaagccaatggcggccatt
gtgcacggtaacacaaggataagtatttatttcagtcctctgtgggaggg
ctgcattttcttctgaggtcatctggagcaaatgtagctcccacaggggc
ctcgttttatgaggcccagcttaacctggccacaccatgctagactaaca
aaggggaattggagaggtggcaacagagtgactcagccagccttaaccct
tgagagcctggagagaaatatccagctcagctcttctacacattgagggc
tctgggggacctgtctgccttcaaagaagagatcaacaattgcagacaac
tgcctgtcattgtcgcctagaatagccccagtcctcggtcctttttatcc
agtgctggataaaaaaccttactttctctagtcttaactgccattcctca
acctttctaccatctccttttctgctctgatacaatgatgcaattcttgg
tttttctacttgggaaacacacacacacaaacataaatcccaacttaatg
tttccagttagctattaaatgcctctgacttgtgtcaaatgtaacaacct
atgcctcctcccttactctcccaccactaccaaataaaaagcaatgcccc
actcccccacttcattgaacggcaattccaccttctccaaactcaactct
gtttaatggcacacacccagccctccagaaaatgccttgggtgtccattt
agaccataccttgaccatcatatcttagccccccaccatccatctctctt
gtaaatgaatggttgcataacctcccacctgatcttcctgcttccgtgcc
tgtcgtccttcatacaaaaaagcagacttaccggtgcttccaacttcaaa
acactttcagctcaactcttccagaatgtcagctgggaaagaatggacgg
tccttttagtttatatgtctggtgcatgtgccc
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_110976028_110977174
seq2: B6Ng01-084F19.b_53_1185 (reverse)

seq1  GGGCACATGCA-CAGACATATAAAACTTAAAAAAGGACCTTTCATTTTTT  49
      ||||||||||| ||||||||| |||||   ||||||||| | |||| |||
seq2  GGGCACATGCACCAGACATAT-AAACT---AAAAGGACCGTCCATTCTTT  46

seq1  TTTTTTTCTCCAGCTGACATTCCTGGAGAGTTTGAGCTGAAAGTGTTTTG  99
               |||||||||||||  | |||| |||||||||||||||||||
seq2  --------CCCAGCTGACATTCTGGAAGAG-TTGAGCTGAAAGTGTTTTG  87

seq1  AAGTTTGGAAGCACCGGTAAGTCTGCTGTTTTGTATGAAGGACGACAGGC  149
      ||| ||||||||||||||||||||||| ||||||||||||||||||||||
seq2  AAG-TTGGAAGCACCGGTAAGTCTGCTTTTTTGTATGAAGGACGACAGGC  136

seq1  ACGGAAGCAGGAAGATCAGGTGGGAGGTTATTGCAACCATTCATTTACAA  199
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  ACGGAAGCAGGAAGATCAGGTGGGAGGTTA-TGCAACCATTCATTTACAA  185

seq1  GAGAGATGGATGGTGGGGGGCTAAGATATGATGGTCAAGGTATGGTCTAA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGATGGATGGTGGGGGGCTAAGATATGATGGTCAAGGTATGGTCTAA  235

seq1  ATGGACACCCAAGGCATTTTCTGGAGGGCTGGGTGTGTGCCATTAAACAG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGACACCCAAGGCATTTTCTGGAGGGCTGGGTGTGTGCCATTAAACAG  285

seq1  AGTTGAGTTTGGAGAAGGTGGAATTGCCGTTCAATGAAGTGGGGGAGTGG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGAGTTTGGAGAAGGTGGAATTGCCGTTCAATGAAGTGGGGGAGTGG  335

seq1  GGCATTGCTTTTTATTTGGTAGTGGTGGGAGAGTAAGGGAGGAGGCATAG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATTGCTTTTTATTTGGTAGTGGTGGGAGAGTAAGGGAGGAGGCATAG  385

seq1  GTTGTTACATTTGACACAAGTCAGAGGCATTTAATAGCTAACTGGAAACA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTTACATTTGACACAAGTCAGAGGCATTTAATAGCTAACTGGAAACA  435

seq1  TTAAGTTGGGATTTATGTTTGTGTGTGTGTGTTTCCCAAGTAGAAAAACC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGTTGGGATTTATGTTTGTGTGTGTGTGTTTCCCAAGTAGAAAAACC  485

seq1  AAGAATTGCATCATTGTATCAGAGCAGAAAAGGAGATGGTAGAAAGGTTG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATTGCATCATTGTATCAGAGCAGAAAAGGAGATGGTAGAAAGGTTG  535

seq1  AGGAATGGCAGTTAAGACTAGAGAAAGTAAGGTTTTTTATCCAGCACTGG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAATGGCAGTTAAGACTAGAGAAAGTAAGGTTTTTTATCCAGCACTGG  585

seq1  ATAAAAAGGACCGAGGACTGGGGCTATTCTAGGCGACAATGACAGGCAGT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAAGGACCGAGGACTGGGGCTATTCTAGGCGACAATGACAGGCAGT  635

seq1  TGTCTGCAATTGTTGATCTCTTCTTTGAAGGCAGACAGGTCCCCCAGAGC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGCAATTGTTGATCTCTTCTTTGAAGGCAGACAGGTCCCCCAGAGC  685

seq1  CCTCAATGTGTAGAAGAGCTGAGCTGGATATTTCTCTCCAGGCTCTCAAG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAATGTGTAGAAGAGCTGAGCTGGATATTTCTCTCCAGGCTCTCAAG  735

seq1  GGTTAAGGCTGGCTGAGTCACTCTGTTGCCACCTCTCCAATTCCCCTTTG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTAAGGCTGGCTGAGTCACTCTGTTGCCACCTCTCCAATTCCCCTTTG  785

seq1  TTAGTCTAGCATGGTGTGGCCAGGTTAAGCTGGGCCTCATAAAACGAGGC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTCTAGCATGGTGTGGCCAGGTTAAGCTGGGCCTCATAAAACGAGGC  835

seq1  CCCTGTGGGAGCTACATTTGCTCCAGATGACCTCAGAAGAAAATGCAGCC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGTGGGAGCTACATTTGCTCCAGATGACCTCAGAAGAAAATGCAGCC  885

seq1  CTCCCACAGAGGACTGAAATAAATACTTATCCTTGTGTTACCGTGCACAA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCACAGAGGACTGAAATAAATACTTATCCTTGTGTTACCGTGCACAA  935

seq1  TGGCCGCCATTGGCTTGGGACTGTGATGTCAGTGAAGCCTATCCTGCCTG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCGCCATTGGCTTGGGACTGTGATGTCAGTGAAGCCTATCCTGCCTG  985

seq1  AGGCTGCTCAGCATAGCCTGCCAGGCCCAGGAGCTGAGCCTTTCCTCAGG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTGCTCAGCATAGCCTGCCAGGCCCAGGAGCTGAGCCTTTCCTCAGG  1035

seq1  GTTTGAACAGACTCTTAGTTCTTCCACTCAGGAGTTCAGCTGGCAGGATG  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGAACAGACTCTTAGTTCTTCCACTCAGGAGTTCAGCTGGCAGGATG  1085

seq1  TTAGCATCTGTGCCGCCCACTGCAGCCTGGCTTCTCCTCAAGGCACTT  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCATCTGTGCCGCCCACTGCAGCCTGGCTTCTCCTCAAGGCACTT  1133