BAC Information

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BAC

Clone NameB6Ng01-084F21
Chromosome10 (Build37)
Map Location 82,565,082 - 82,731,744
singlet/doubletdoublet
Overlap geneChst11, Slc41a2
Upstream geneBC024063, AU041133, LOC100042712, B230315N10Rik, LOC100042718, EG237412, LOC666611, Gm1553, LOC544716, 1190007I07Rik, Tdg, Glt8d2, Hcfc2, Nfyb, 1700028I16Rik, Txnrd1, Eid3, EG216185
Downstream geneD10Wsu102e, LOC666748, Aldh1l2, A230046K03Rik, Appl2, 1500009L16Rik, LOC100041225, C230099D08Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-084F21.bB6Ng01-084F21.g
ACCDH898348DH898349
length1,0921,117
definitionDH898348|Mus musculus domesticus DNA, BAC clone: B6Ng01-084F21, 5' end.DH898349|Mus musculus domesticus DNA, BAC clone: B6Ng01-084F21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(82,730,656 - 82,731,744)(82,565,082 - 82,566,209)
sequence
gaattcacagaaatcttcctgcctctacctcctaagtgctgggattaaac
aaccaccccgttttgtttgtttcaagacaggttttatctttgtaacaatc
ctgggtgtcctggaactggctttgtagatcaggttgccctcaaactcaga
tctgcctgcctctgcctccctatgagtgtgtcatatttattgaatattag
ggtgctgaaggccttggaaagataagccacaccgtccagtcagcgtgaga
gaagggatccatccctgagaagtggtggaaacagggaggaggggagggac
gagggattaggatggggacttagggctgaagcctcacttgtcccaggtca
agtagacagatttagttaccagcacagctcctctcaacctctgtccatgt
cacagtgcatgaagaggaaagccataatgtttgaatgatgtactaggctg
aaggaggcacttgaggttattctaagagttagagggttgtctcaccatgc
ctgtaattcatttcccacacaccaggtagggaggactaatctagggcagt
catttgtaagctgggttttttttcactacactttctgaaggagccattta
aaataatttcccccaaagatggctacatgagtataacattacagattccc
tgtgtgtctatttatatctgttatacagtactgcatagtgcaaagttaca
catatacatatttatcacatgattatattataaatgtatatggaaaatct
atattcttttatacattaaagaatgtatacagtatatacttttatacatg
gaaggaatacagtatttttgccctcactagtaatgaatgagctacaatgg
aaaatgcagaggtcagtcattagccagtttatgcaaattatggaaaataa
agagagtgcatggggaacgggaatttagtgtacctgcccatatccagatg
gaagggctccacctgcacctgaaagacaaggaaatggagacgtctctcaa
tccctgtgaccggaggacatctctccaattcctgtgcatgattggaaact
ggaggtattactgtcaccgtgagcgctgatgaggaggccctg
gaattcagatccctatcacattgattttaagaagggggttaaaaagaaag
ctggcgtttcgtgtgtcttgtggtgtcgtaggtgtggggtttggtgtggt
gccctgtgttgcaatcccagcatcggggaggtaggcaaacaaggattccc
gcacctcactggcctgtagtcctacagaatctgtgagcttcaggttcgat
gaaagccctgaggctaaataaggtaaagaattccagaggaaggtacctga
tagcaaccaccagacacacacacacacacacacacacacacacacacaca
cacacaccataaaccaaacagaacgtccatttgttcctctggagagaaaa
gtgaaacacagagacccatgggttttgtcaatgggacatttctagtttct
ccttcaacagcaaccagaaagacggttgagaaggaacctagttcacccac
tgcgtagggacaatgtgaatggaaagacccctccctctcttactacagcg
cgagctcagccatgcactcagcaggcagctcggcagttctgtgattgacg
ttctcaaggccccgtattcccgggctgatgggcttgcttgcagatcacgt
cctgatttgtagggaagttgcatgctagaaaaacgaggagacttaaaggc
tgtcttgagacttgtcccttcaaaggtacagcctagccccccacccccaa
ctgtacccgcgtccccctcggtctcctactggccacgcttgtgatttgca
tcccctgaatggtacctctcggttcagaaacccagttgcatctctctgag
attgctttcctgtgacagggataaatgagccagtgtttgagaccgggtga
ctctttgaggcactggggagttcacaagcggctgatacctaattattcct
ggtctgggggaagcagcctgaaagagaagctaagatggcagaaagatcta
gcctttcctccgggagtggcctccctctgtgtaccttagcttcaacagga
atggcaggagcatcctctggaagctgtgtaggtcgtgattgcctccgctc
cacttttctttattgagaccagctagagaaacgaaaagccttgttatact
gcttgctcatcattcat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_82730656_82731744
seq2: B6Ng01-084F21.b_43_1134 (reverse)

seq1  CAGGG-CTCCTCATCAGCGCTCAC-GTG-CAGTAATTACTCTTCAGTTTC  47
      ||||| |||||||||||||||||| ||| |||||||  |||  |||||||
seq2  CAGGGCCTCCTCATCAGCGCTCACGGTGACAGTAATACCTC--CAGTTTC  48

seq1  AAAACATGCACAGGAA-TGGAGAGATGTCCTCCGTTCACAGGGATGGAGA  96
       || |||||||||||| ||||||||||||||||| |||||||||| ||||
seq2  CAATCATGCACAGGAATTGGAGAGATGTCCTCCGGTCACAGGGATTGAGA  98

seq1  GACGGTCTCCATTTTCCTGTCTTTCAGGTGCAGGTGGAGCCCTTCCATCT  146
      ||| |||||||||| | |||||||||||||||||||||||||||||||||
seq2  GAC-GTCTCCATTTCCTTGTCTTTCAGGTGCAGGTGGAGCCCTTCCATCT  147

seq1  GGATATGGGCAGGTACACTAAATTCCCGTTCCCCATGCACTCTCTTTATT  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATATGGGCAGGTACACTAAATTCCCGTTCCCCATGCACTCTCTTTATT  197

seq1  TTCCATAATTTGCATAAACTGGCTAATGACTGACCTCTGCATTTTCCATT  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATAATTTGCATAAACTGGCTAATGACTGACCTCTGCATTTTCCATT  247

seq1  GTAGCTCATTCATTACTAGTGAGGGCAAAAATACTGTATTCCTTCCATGT  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCTCATTCATTACTAGTGAGGGCAAAAATACTGTATTCCTTCCATGT  297

seq1  AT-AAAGTATATACTGTATACATTCTTTAATGTAT-AAAGAATATAGATT  344
      || |||||||||||||||||||||||||||||||| ||||||||||||||
seq2  ATAAAAGTATATACTGTATACATTCTTTAATGTATAAAAGAATATAGATT  347

seq1  TTCCATATACATTTATAATATAATCATGTGATAAATATGTATATGTGTAA  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATATACATTTATAATATAATCATGTGATAAATATGTATATGTGTAA  397

seq1  CTTTGCACTATGCAGTACTGTATAACAGATATAAATAGACACACAGGGAA  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGCACTATGCAGTACTGTATAACAGATATAAATAGACACACAGGGAA  447

seq1  TCTGTAATGTTATACTCATGTAGCCATCTTTGGGGGAAATTATTTTAAAT  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTAATGTTATACTCATGTAGCCATCTTTGGGGGAAATTATTTTAAAT  497

seq1  GGCTCCTTCAGAAAGTGTAGTGAAAAAAAACCCAGCTTACAAATGACTGC  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCCTTCAGAAAGTGTAGTGAAAAAAAACCCAGCTTACAAATGACTGC  547

seq1  CCTAGATTAGTCCTCCCTACCTGGTGTGTGGGAAATGAATTACAGGCATG  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGATTAGTCCTCCCTACCTGGTGTGTGGGAAATGAATTACAGGCATG  597

seq1  GTGAGACAACCCTCTAACTCTTAGAATAACCTCAAGTGCCTCCTTCAGCC  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGACAACCCTCTAACTCTTAGAATAACCTCAAGTGCCTCCTTCAGCC  647

seq1  TAGTACATCATTCAAACATTATGGCTTTCCTCTTCATGCACTGTGACATG  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTACATCATTCAAACATTATGGCTTTCCTCTTCATGCACTGTGACATG  697

seq1  GACAGAGGTTGAGAGGAGCTGTGCTGGTAACTAAATCTGTCTACTTGACC  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGAGGTTGAGAGGAGCTGTGCTGGTAACTAAATCTGTCTACTTGACC  747

seq1  TGGGACAAGTGAGGCTTCAGCCCTAAGTCCCCATCCTAATCCCTCGTCCC  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGACAAGTGAGGCTTCAGCCCTAAGTCCCCATCCTAATCCCTCGTCCC  797

seq1  TCCCCTCCTCCCTGTTTCCACCACTTCTCAGGGATGGATCCCTTCTCTCA  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCTCCTCCCTGTTTCCACCACTTCTCAGGGATGGATCCCTTCTCTCA  847

seq1  CGCTGACTGGACGGTGTGGCTTATCTTTCCAAGGCCTTCAGCACCCTAAT  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTGACTGGACGGTGTGGCTTATCTTTCCAAGGCCTTCAGCACCCTAAT  897

seq1  ATTCAATAAATATGACACACTCATAGGGAGGCAGAGGCAGGCAGATCTGA  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAATAAATATGACACACTCATAGGGAGGCAGAGGCAGGCAGATCTGA  947

seq1  GTTTGAGGGCAACCTGATCTACAAAGCCAGTTCCAGGACACCCAGGATTG  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGAGGGCAACCTGATCTACAAAGCCAGTTCCAGGACACCCAGGATTG  997

seq1  TTACAAAGATAAAACCTGTCTTGAAACAAACAAAACGGGGTGGTTGTTTA  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAAAGATAAAACCTGTCTTGAAACAAACAAAACGGGGTGGTTGTTTA  1047

seq1  ATCCCAGCACTTAGGAGGTAGAGGCAGGAAGATTTCTGTGAATTC  1089
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCAGCACTTAGGAGGTAGAGGCAGGAAGATTTCTGTGAATTC  1092

seq1: chr10_82565082_82566209
seq2: B6Ng01-084F21.g_67_1183

seq1  GAATTCAGATCCCTATCACATTGATTTTAAGAAGGGGGTTAAAAAGAAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGATCCCTATCACATTGATTTTAAGAAGGGGGTTAAAAAGAAAG  50

seq1  CTGGCGTTTCGTGTGTCTTGTGGTGTCGTAGGTGTGGGGTTTGGTGTGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCGTTTCGTGTGTCTTGTGGTGTCGTAGGTGTGGGGTTTGGTGTGGT  100

seq1  GCCCTGTGTTGCAATCCCAGCATCGGGGAGGTAGGCAAACAAGGATTCCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTGTGTTGCAATCCCAGCATCGGGGAGGTAGGCAAACAAGGATTCCC  150

seq1  GCACCTCACTGGCCTGTAGTCCTACAGAATCTGTGAGCTTCAGGTTCGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACCTCACTGGCCTGTAGTCCTACAGAATCTGTGAGCTTCAGGTTCGAT  200

seq1  GAAAGCCCTGAGGCTAAATAAGGTAAAGAATTCCAGAGGAAGGTACCTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGCCCTGAGGCTAAATAAGGTAAAGAATTCCAGAGGAAGGTACCTGA  250

seq1  TAGCAACCACCAGACACACACACACACACACACACACACACACACACACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAACCACCAGACACACACACACACACACACACACACACACACACACA  300

seq1  CACACACCATAAACCAAACAGAACGTCCATTTGTTCCTCTGGAGAGAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACCATAAACCAAACAGAACGTCCATTTGTTCCTCTGGAGAGAAAA  350

seq1  GTGAAACACAGAGACCCATGGGTTTTGTCAATGGGACATTTCTAGTTTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAACACAGAGACCCATGGGTTTTGTCAATGGGACATTTCTAGTTTCT  400

seq1  CCTTCAACAGCAACCAGAAAGACGGTTGAGAAGGAACCTAGTTCACCCAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCAACAGCAACCAGAAAGACGGTTGAGAAGGAACCTAGTTCACCCAC  450

seq1  TGCGTAGGGACAATGTGAATGGAAAGACCCCTCCCTCTCTTACTACAGCG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGTAGGGACAATGTGAATGGAAAGACCCCTCCCTCTCTTACTACAGCG  500

seq1  CGAGCTCAGCCATGCACTCAGCAGGCAGCTCGGCAGTTCTGTGATTGACG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGCTCAGCCATGCACTCAGCAGGCAGCTCGGCAGTTCTGTGATTGACG  550

seq1  TTCTCAAGGCCCCGTATTCCCGGGCTGATGGGCTTGCTTGCAGATCACGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCAAGGCCCCGTATTCCCGGGCTGATGGGCTTGCTTGCAGATCACGT  600

seq1  CCTGATTTGTAGGGAAGTTGCATGCTAGAAAAACGAGGAGACTTAAAGGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGATTTGTAGGGAAGTTGCATGCTAGAAAAACGAGGAGACTTAAAGGC  650

seq1  TGTCTTGAGACTTGT-CCTTCAAAGGTACAGCCTAGCCCCCCACCCCCAA  699
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  TGTCTTGAGACTTGTCCCTTCAAAGGTACAGCCTAGCCCCCCACCCCCAA  700

seq1  CTGTACCCGCGTCCCCCTCGGTCTCCTACTGGCCACGCTTGTGATTTGCA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTACCCGCGTCCCCCTCGGTCTCCTACTGGCCACGCTTGTGATTTGCA  750

seq1  TCCCCTGAATGGTACCTCTCGGTTCAGAAACCCAGTTGCATCTCTCTGAG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCTGAATGGTACCTCTCGGTTCAGAAACCCAGTTGCATCTCTCTGAG  800

seq1  ATTGCTTTCCTGTGACAGGGATAAATGAGCCAGTGTTTGAGACCGGGTGA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCTTTCCTGTGACAGGGATAAATGAGCCAGTGTTTGAGACCGGGTGA  850

seq1  CTCTTTGAGGCACTGGGGAGTTCACAAGCGGCTGATACCTAATTATTCCT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTGAGGCACTGGGGAGTTCACAAGCGGCTGATACCTAATTATTCCT  900

seq1  GGTCTTGGGGGAAGCAGCCTGAAAGAGAAGCTAAGATGGCAGAGAAGATC  949
      |||| |||||||||||||||||||||||||||||||||||||| ||||||
seq2  GGTC-TGGGGGAAGCAGCCTGAAAGAGAAGCTAAGATGGCAGA-AAGATC  948

seq1  TAGGCCTTTCCTCCGGGAGTGGCCTCCCTCCTGTGTACCCTTAGC-TCAC  998
      || |||||||||||||||||||||||||| ||||||| ||||||| ||| 
seq2  TA-GCCTTTCCTCCGGGAGTGGCCTCCCT-CTGTGTA-CCTTAGCTTCAA  995

seq1  CAGGGAATGGGCAGGAGCATCCTCTGAGAGCTGTGTAGTCAGTGAATGGC  1048
      || ||||| |||||||||||||||||  ||||||||||   |||| || |
seq2  CA-GGAAT-GGCAGGAGCATCCTCTGGAAGCTGTGTAGGTCGTGATTGCC  1043

seq1  T-CGCTCACCCTTTTCTTAATGAGGACCAGCTAGAGAAACAGAAAGCCCT  1097
      | ||||| | |||||||| ||   |||||||||||||||| ||||  |||
seq2  TCCGCTC-CACTTTTCTTTATTGAGACCAGCTAGAGAAAC-GAAAAGCCT  1091

seq1  TGTTTATTTACTTGCTTGCTCATTCATTCAT  1128
      |||   | ||| |||||||||| ||||||||
seq2  TGT---TATAC-TGCTTGCTCA-TCATTCAT  1117