BAC Information

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BAC

Clone NameB6Ng01-085B02
Chromosome10 (Build37)
Map Location 103,861,296 - 103,862,422
singlet/doubletsinglet
Overlap genenone
Upstream geneSlc6a15, EG667697, LOC667701, EG627488, EG667692, EG667695, LOC100043292
Downstream geneLOC100042383, Tmtc2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-085B02.bB6Ng01-085B02.g
ACCDH898842DH898843
length1,2541,114
definitionDH898842|Mus musculus domesticus DNA, BAC clone: B6Ng01-085B02, 5' end.DH898843|Mus musculus domesticus DNA, BAC clone: B6Ng01-085B02, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaagaacagcctattctacattgtaagtcccaggacagatagatt
agttcaatttactattttagaataataaatattaactctttttgtatgta
gtaagacgatttaaaatgtactcagcagttttcaatgatatatatatata
atttgcatacagtatataatttgctatagttaccaagatatggtttacat
cttaagcctacatttttgaaatgaaattttgtattctttgactaaattct
catattatctatccaatacactttggtaactgttactgaccttaccaaaa
aaaataaatcttaatactagtaaaagtagattatattaattttaacaatg
aagacacagaaaaatatgcatctatgaacttctttttttttttagtattt
tttattattacgtattttcctcaattacatttagaatgctatcccaaaag
tcccccataccctcccgcccatgtccttactcacccattcccattttttg
gccctggcattcccctgtactggagcatataaagtttgcgtgtctaaagg
gcctctctttccagtggtggccgactaggccatcttttgatacatatgca
gctagagtcaagagctccggggtactggttagttcataatgttgttgcac
atacagggttgcagatctctttagctccttggatactttctatagctcct
ccattgggggccctgtgatccatccaatagctgactgtgagcatctactt
atgtgtttgctaggtcccagcctagcctcacaagagacagctatatcacg
gtcctttcagcaaaatcttggtagtgtatgcaatggtgtcatcgtttgga
ggctaattatgggatgggtctctggatatggcagtctctagatggtccat
ccttttgtctcagctccaaactttgtaactccttccatgggtgattgttt
ccaattctaagaggggcaaagtgtccacactttggtctttattcttcttc
agtttcatgtgtctgcaaattgtatcttttatctcggtatactagttctg
ggctatattccactaatcagtgagtaatatcatttgagttctttatgatt
gtgttacctactcagaatgatcctcaggtcaatcaattgcctagatccta
atcatctttatagccaggaggatccatggtaagtcatgagtttttgttat
cgatccccttgtacagggcactcgcgtatcggagtgtgcctctccttact
gact

gaattcttcctaagttattactagaaaatgataagtctgtggagacagag
tcatgactagggtttttcactgtagaagttaatggtgttagttgcttcct
tttttatatcagtaagaaaagggaaaggtaacttgattagataacttgtg
ctatattcaatagataggatgcattacaaccccacacataaacaaaaggt
aaaaacatgtgtaggtacacattagttcaccagaaaaaaaacatataata
aaatgataagtgacaataacagcaaaaatggaaatatgcataactgtatc
tcaattacctaaatgagcatgtcctataaacatgaatgaaatggatatat
gcattctttacttttctgaaaaatattacataagtttaaagaaaaacttg
aatctgttttccagtttgtggtaagtttattcgagttttagaattatgag
ctttgggagaatctttgtatacttttctatgcaattgtaaatgaagtgtg
tgacatttcattttactaaataaaaaatacaacaatttatctcatgggat
aaatgtgacttcatgcaaagatgaaaagtaggcatacaaatgacatgact
ggatagttagaagtggatataaaattgttactcaactgaaaatcccaata
atgaaaatatttgtttctgatatttcacaaagtggaaatctttagagaga
tgctgttgtcaaagtttatagaaatagtgtggtcctttgtgtttaaatta
cttatatctgatatgattaattattggcagctatgttattgtattaccta
aggagatgtttaaaaagttaaaatctgcagaccctgggggtgaactctgt
aagccattccacaacatttcagagggatattcacccccaggtactccaac
actcccaggatcataggatcacagccaggccaacaacacccagaggaatc
tcactcccaagctctctaacatgctcagatctagatcagagtgagaggaa
aaaacatctgccctacactgaaagtaactgggacagtgggtctaagcagc
agatctacacttgacagtggcacagtttccttctgtctgacttgtacctg
aagcaaacgttggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_103861296_103862422
seq2: B6Ng01-085B02.g_68_1181

seq1  GAATTCTTCCTAAGTTATTACTAGAAAATGATAAGTCTGTGGAGACAGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCCTAAGTTATTACTAGAAAATGATAAGTCTGTGGAGACAGAG  50

seq1  TCATGACTAGGGTTTTTCACTGTAGAAGTTAATGGTGTTAGTTGCTTCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGACTAGGGTTTTTCACTGTAGAAGTTAATGGTGTTAGTTGCTTCCT  100

seq1  TTTTTATATCAGTAAGAAAAGGGAAAGGTAACTTGATTAGATAACTTGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTATATCAGTAAGAAAAGGGAAAGGTAACTTGATTAGATAACTTGTG  150

seq1  CTATATTCAATAGATAGGATGCATTACAACCCCACACATAAACAAAAGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATATTCAATAGATAGGATGCATTACAACCCCACACATAAACAAAAGGT  200

seq1  AAAAACATGTGTAGGTACACATTAGTTCACCAGAAAAAAAACATATAATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACATGTGTAGGTACACATTAGTTCACCAGAAAAAAAACATATAATA  250

seq1  AAATGATAAGTGACAATAACAGCAAAAATGGAAATATGCATAACTGTATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGATAAGTGACAATAACAGCAAAAATGGAAATATGCATAACTGTATC  300

seq1  TCAATTACCTAAATGAGCATGTCCTATAAACATGAATGAAATGGATATAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATTACCTAAATGAGCATGTCCTATAAACATGAATGAAATGGATATAT  350

seq1  GCATTCTTTACTTTTCTGAAAAATATTACATAAGTTTAAAGAAAAACTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTCTTTACTTTTCTGAAAAATATTACATAAGTTTAAAGAAAAACTTG  400

seq1  AATCTGTTTTCCAGTTTGTGGTAAGTTTATTCGAGTTTTAGAATTATGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTGTTTTCCAGTTTGTGGTAAGTTTATTCGAGTTTTAGAATTATGAG  450

seq1  CTTTGGGAGAATCTTTGTATACTTTTCTATGCAATTGTAAATGAAGTGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGGGAGAATCTTTGTATACTTTTCTATGCAATTGTAAATGAAGTGTG  500

seq1  TGACATTTCATTTTACTAAATAAAAAATACAACAATTTATCTCATGGGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACATTTCATTTTACTAAATAAAAAATACAACAATTTATCTCATGGGAT  550

seq1  AAATGTGACTTCATGCAAAGATGAAAAGTAGGCATACAAATGACATGACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTGACTTCATGCAAAGATGAAAAGTAGGCATACAAATGACATGACT  600

seq1  GGATAGTTAGAAGTGGATATAAAATTGTTACTCAACTGAAAATCCCAATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATAGTTAGAAGTGGATATAAAATTGTTACTCAACTGAAAATCCCAATA  650

seq1  ATGAAAATATTTGTTTCTGATATTTCACAAAGTGGAAATCTTTAGAGAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAAATATTTGTTTCTGATATTTCACAAAGTGGAAATCTTTAGAGAGA  700

seq1  TGCTGTTGTCAAAGTTTATAGAAATAGTGTGGTCCTTTGTGTTTAAATTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGTTGTCAAAGTTTATAGAAATAGTGTGGTCCTTTGTGTTTAAATTA  750

seq1  CTTATATCTGATATGATTAATTATTGGCAGCTATGTTATTGTATTACCTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATATCTGATATGATTAATTATTGGCAGCTATGTTATTGTATTACCTA  800

seq1  AGGAGATGTTTAAAAAGTTAAAATCTGCAGACCTTGGGGGTGAACTCTGT  850
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  AGGAGATGTTTAAAAAGTTAAAATCTGCAGACCCTGGGGGTGAACTCTGT  850

seq1  AAGCCATTCCACAACA-TTCAGAGGAATATTCACCCCCAGGTACTCCAAC  899
      |||||||||||||||| |||||||| ||||||||||||||||||||||||
seq2  AAGCCATTCCACAACATTTCAGAGGGATATTCACCCCCAGGTACTCCAAC  900

seq1  ACTCCCAGGATCATAGGATCACAGCCAGGCCAACAACACCCAGAGGAATC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCCAGGATCATAGGATCACAGCCAGGCCAACAACACCCAGAGGAATC  950

seq1  TCCACTCCCAAGCTCTCTAACATGCTCAGGATCTTAGGATCAGAGGTGAG  999
      | |||||||||||||||||||||||||| |||||   ||||||| |||| 
seq2  T-CACTCCCAAGCTCTCTAACATGCTCA-GATCT--AGATCAGA-GTGA-  994

seq1  GAGGACAAAACATCTGCCCCAACACTGAAAGTAACTGGGACCAGTGGGTC  1049
      ||||| |||||||||| ||| ||||||||||||||||||| |||||||||
seq2  GAGGAAAAAACATCTG-CCCTACACTGAAAGTAACTGGGA-CAGTGGGTC  1042

seq1  TCAGGCAGCCAGAATCTACACCTGACCAGTGGCACAGTTTCCCTCTGGTC  1099
      | | |||| ||| |||||||| ||| |||||||||||||||| ||| |||
seq2  T-AAGCAG-CAG-ATCTACACTTGA-CAGTGGCACAGTTTCCTTCT-GTC  1087

seq1  TGAGCTGGTACCCTGAGCAAACGTTGGG  1127
      ||| || |||||   |||||||||||||
seq2  TGA-CTTGTACCTGAAGCAAACGTTGGG  1114


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