BAC Information

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BAC

Clone NameB6Ng01-085J22
Chromosome10 (Build37)
Map Location 24,168,180 - 24,347,875
singlet/doubletdoublet
Overlap geneLOC628537, Ctgf
Upstream geneRps12, 1110021L09Rik, Vnn3, Vnn1, Taar1, Taar2, Taar3, Taar4, Taar5, Taar6, Taar7a, Taar7b, Taar7c-ps, Taar7d, Taar7e, LOC628480, Taar7f, Taar8a, Taar8b, Taar8c, Taar9, Stx7, Moxd1
Downstream geneEnpp1, Enpp3, Crsp3, Arg1, EG667479, LOC212399, Akap7, LOC665800, Epb4.1l2, 2010003K15Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-085J22.bB6Ng01-085J22.g
ACCDH899247DH899248
length1,1711,207
definitionDH899247|Mus musculus domesticus DNA, BAC clone: B6Ng01-085J22, 5' end.DH899248|Mus musculus domesticus DNA, BAC clone: B6Ng01-085J22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(24,168,180 - 24,169,344)(24,346,644 - 24,347,875)
sequence
gaattcattccaagttggagggatattttttcccttgacattttgcagct
gaggcggccccaaggaggaagctgaagagcgtaacattaccaaatatgtc
ctttctcctgcttgtatattttatttccacaggaaaagaaggcagattca
ggccaagaagggctggccaagaagaaccgggccatcgcaggcagcttctg
gcagatgaagacattgatcagtcgccatagttctcaagaaaggaagctgt
tggtgcccaccagtagaaatctgctttgcttcaagacaaattctgacaat
ttttttttacatgttatccctctgtttcagaaaaattacctgtccttgtg
ttggtctcctgttcttaaaagcacttgagtgggatttaaagccagtgtgt
attcctttaactaagcctgtgtattctccaactgggagggtcagtctaca
gtgaggtttcagaagcctcatctatgaaatgaagatgcaggttgcccaag
tcacgttaaattcccaagactggtaactctagccttatttgatcacgtgc
tttaatcccttaaatttcagcactcttcccaatatttatgtatgcatgat
tcagaattactacaacttgactccgtcttacaaaacatataatggaatat
gcctatacacatatgcacacaaaatcaacgtttaatatagatgatttata
agaaatgaaagggaagatgctaggctagggatatggttcagttggtagaa
cttgcctactacacacaaagccttgggttccatctgtgacactgcatgaa
acagacacaggagtacacaactgtaattctaacaggaggcaaaagtatta
caatttcaaggtcattctgtatctaatatagagtttgaggcctgcatggg
ctcatatgagatatctaaaagtcataaatatgtattttaatgcttttctt
ttaatatcagtggtttgtattgggtattgttgttgctgttggcattatta
gtattgttgttgggaacatgggcattattctaattgtcagaactggtcta
gacctcagcttgtttcttaaccttcaatctttctgttctcaatcttctca
ttatttgcagtacatgttgacaccccacccacagtttagtattcttatct
ttaatccaacatgttagcaac
gaattcccccccccccccccatgaaatcatctcacaaccaaggcaaagct
acatgccacgtctgacactaccaattgcaagctgggtccctgggctatag
gaatgggggcagcccccgctgggctaggcagactgggaagcgggaagcgg
ggcggctcctttgctccagcgcttaagagtccttatgggccgctgcttta
tagtcttaccagcctcagcccagttcaaatagtcactaaactttgtattc
tacgcttacagaattccacaaacacacccacctgcactgggtcctttatt
acttaaaagggcttaaagaaacatgttttaaaagaaaatttcctttgtac
acatatacctatgtagagcctagacggcctctcagctgactgggtcccca
gccccccaagctgagaaggctctgcgaggctctgcaaggctctgcaaggc
tgctacaacgtgcagagtttggctgcatggattttaatgagagcgtcagg
cggagctgtgctgttgctcaccgggacttgcagatcattaccaaaccagc
tataggatgagaacacagcacatggaaaccctaggaggtcactgagctaa
tgatctaaccctaccttccgcagacagggcccctccctccccagctcctc
gcgaccccagtctttcctggtggactctgtccattccagaagccaggcca
ataccgccgctgcaaggtcggaacagagccacagtgagcagagaagcgtt
atgttttaaatattggtttcaaagtgttcattactgacatatagagttaa
aatgtatttatttatttattggtttttcgagacagggtttctctgtataa
gccctggctgtcctggaactcactttgtagacaaggctggcctcgaactc
agaatccgcctgcctgtgcctcccaagtgctgggattaaaggcatgcgca
ccacgcccagcttaaaattatttttttttataaactgtcttatatcccaa
accttgggtaactcatattggctcgtctaggatgattaagttcccttgat
gttctctcatagaacgccatgcattgcagagagagatgtcttttcattcg
gcctcggtgtgccccattctagcctgactgactgaatcgcaaacctgtat
gctatggcaaaggatatgtggctctccgaggaactgatcacttatcggaa
tccgcgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_24168180_24169344
seq2: B6Ng01-085J22.b_48_1218

seq1  GAATTCATTCCAAGTTGGAGGGATATTTTTTCCCTTGACATTTTGCAGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTCCAAGTTGGAGGGATATTTTTTCCCTTGACATTTTGCAGCT  50

seq1  GAGGCGGCCCCAAGGAGGAAGCTGAAGAGCGTAACATTACCAAATATGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCGGCCCCAAGGAGGAAGCTGAAGAGCGTAACATTACCAAATATGTC  100

seq1  CTTTCTCCTGCTTGTATATTTTATTTCCACAGGAAAAGAAGGCAGATTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTCCTGCTTGTATATTTTATTTCCACAGGAAAAGAAGGCAGATTCA  150

seq1  GGCCAAGAAGGGCTGGCCAAGAAGAACCGGGCCATCGCAGGCAGCTTCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAAGAAGGGCTGGCCAAGAAGAACCGGGCCATCGCAGGCAGCTTCTG  200

seq1  GCAGATGAAGACATTGATCAGTCGCCATAGTTCTCAAGAAAGGAAGCTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGATGAAGACATTGATCAGTCGCCATAGTTCTCAAGAAAGGAAGCTGT  250

seq1  TGGTGCCCACCAGTAGAAATCTGCTTTGCTTCAAGACAAATTCTGACAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGCCCACCAGTAGAAATCTGCTTTGCTTCAAGACAAATTCTGACAAT  300

seq1  TTTTTTTTACATGTTATCCCTCTGTTTCAGAAAAATTACCTGTCCTTGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTACATGTTATCCCTCTGTTTCAGAAAAATTACCTGTCCTTGTG  350

seq1  TTGGTCTCCTGTTCTTAAAAGCACTTGAGTGGGATTTAAAGCCAGTGTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTCTCCTGTTCTTAAAAGCACTTGAGTGGGATTTAAAGCCAGTGTGT  400

seq1  ATTCCTTTAACTAAGCCTGTGTATTCTCCAACTGGGAGGGTCAGTCTACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCTTTAACTAAGCCTGTGTATTCTCCAACTGGGAGGGTCAGTCTACA  450

seq1  GTGAGGTTTCAGAAGCCTCATCTATGAAATGAAGATGCAGGTTGCCCAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGGTTTCAGAAGCCTCATCTATGAAATGAAGATGCAGGTTGCCCAAG  500

seq1  TCACGTTAAATTCCCAAGACTGGTAACTCTAGCCTTATTTGATCACGTGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACGTTAAATTCCCAAGACTGGTAACTCTAGCCTTATTTGATCACGTGC  550

seq1  TTTAATCCCTTAAATTTCAGCACTCTTCCCAATATTTATGTATGCATGAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATCCCTTAAATTTCAGCACTCTTCCCAATATTTATGTATGCATGAT  600

seq1  TCAGAATTACTACAACTTGACTCCGTCTTACAAAACATATAATGGAATAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAATTACTACAACTTGACTCCGTCTTACAAAACATATAATGGAATAT  650

seq1  GCCTATACACATATGCACACAAAATCAACGTTTAATATAGATGATTTATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTATACACATATGCACACAAAATCAACGTTTAATATAGATGATTTATA  700

seq1  AGAAATGAAAGGGAAGATGCTAGGCTAGGGATATGGTTCAGTTGGTAGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATGAAAGGGAAGATGCTAGGCTAGGGATATGGTTCAGTTGGTAGAA  750

seq1  CTTGCCTACTACACACAAAGCCTTGGGTTCCATCTGTGACACTGCATGAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCCTACTACACACAAAGCCTTGGGTTCCATCTGTGACACTGCATGAA  800

seq1  ACAGACACAGGAGTACACAACTGTAATTCTAACAGGAGGCAAAAGTATTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGACACAGGAGTACACAACTGTAATTCTAACAGGAGGCAAAAGTATTA  850

seq1  CAATTTCAAGGTCATTCTGTATCTAATATAGAGTTTGAGGCCTGCATGGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTTCAAGGTCATTCTGTATCTAATATAGAGTTTGAGGCCTGCATGGG  900

seq1  CTCATATGAGATATCTAAAAAGTCATAAATATGTATTTTAATGCTTTTCT  950
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  CTCATATGAGATATCT-AAAAGTCATAAATATGTATTTTAATGCTTTTCT  949

seq1  TTTTAAATATCAGTGGTTTGTATT-GGTATTGTTGTTGCTGTTGGCATTA  999
      |||  ||||||||||||||||||| |||||||||||||||||||||||||
seq2  TTT--AATATCAGTGGTTTGTATTGGGTATTGTTGTTGCTGTTGGCATTA  997

seq1  TTAGTATTGTTGTT-GGCACAT-GGCATTATTCT-ATTGTCCAGACTGGT  1046
      |||||||||||||| || |||| ||||||||||| ||||||   ||||||
seq2  TTAGTATTGTTGTTGGGAACATGGGCATTATTCTAATTGTCAGAACTGGT  1047

seq1  CTAGACCTCAGGCTTGTCTC-TAACCCTCCATCTTTCTG-TCTC-ATCTT  1093
      |||||||||| |||||| || ||||| || ||||||||| |||| |||||
seq2  CTAGACCTCA-GCTTGTTTCTTAACCTTCAATCTTTCTGTTCTCAATCTT  1096

seq1  CTCCATTATTGCAATTACATG-TGACACCC--ACCACAGTTTAGTA-TCT  1139
      || |||||||   | |||||| ||||||||   ||||||||||||| |||
seq2  CT-CATTATTTGCAGTACATGTTGACACCCCACCCACAGTTTAGTATTCT  1145

seq1  TATCTTTAAGCACAACATG-TAGCAAC  1165
      ||||||||| | ||||||| |||||||
seq2  TATCTTTAATC-CAACATGTTAGCAAC  1171

seq1: chr10_24346644_24347875
seq2: B6Ng01-085J22.g_69_1275 (reverse)

seq1  CCGCGGTGTCCGATAAGATGTCATGTGTCCTTTCTGGGAGGCACACAATC  50
      ||||||  |||||||||   ||| || |||  || | ||| |||| |  |
seq2  CCGCGGATTCCGATAAGTGATCA-GT-TCC--TCGGAGAGCCACATATCC  46

seq1  ACTGCTGCATAGCAT-CATGTGTTACGA-TCAGTGCAGTCAAGCCAAGAA  98
        |||  |||||||| || || || ||| ||||| |||||| || |   |
seq2  TTTGC--CATAGCATACAGGT-TTGCGATTCAGT-CAGTCAGGCTA--GA  90

seq1  ATGAGGC-CACAGAGAGCCGAAAATGAGAAGGGACATTCTCTCTCTTGCA  147
      ||| ||| ||| ||| ||||  ||||| ||  |||| |||||||| ||||
seq2  ATGGGGCACACCGAG-GCCG--AATGAAAA--GACA-TCTCTCTC-TGCA  133

seq1  AATGGCATGGGCGTCTATGAGAGAACATCAGGGGAACTTAAAAATCATCC  197
      |   ||||||   ||||||||||||||||| ||||||||   ||||||||
seq2  A--TGCATGGCGTTCTATGAGAGAACATCAAGGGAACTT---AATCATCC  178

seq1  TAAGACGAGCCAATATGAGTTTACCAAGGTTGTGGGATATAAGACAGTTT  247
      | |||||||||||||||||||  |||||||| ||||||||||||||| ||
seq2  T-AGACGAGCCAATATGAGTTACCCAAGGTT-TGGGATATAAGACAG-TT  225

seq1  TATAAAAAAAAAATAATTTTAAGCTGGGCGTGGTGGCGCATGCCTTTAAT  297
      ||| |||||||||||||||||||||||||||||| |||||||||||||||
seq2  TAT-AAAAAAAAATAATTTTAAGCTGGGCGTGGT-GCGCATGCCTTTAAT  273

seq1  CCCAGCACTTGGGAGGCACAGGCAGGCGGATTTCTGAGTTCGAGGCCAGC  347
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  CCCAGCACTTGGGAGGCACAGGCAGGCGGA-TTCTGAGTTCGAGGCCAGC  322

seq1  CTGGTCTACAAAGTGAGTTCCAGGACAGCCAGGGCTTATACAGAGAAACC  397
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTCTACAAAGTGAGTTCCAGGACAGCCAGGGCTTATACAGAGAAACC  372

seq1  CTGTCTCGAAAAACCAATAAATAAATAAATACATTTTAACTCTATATGTC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTCGAAAAACCAATAAATAAATAAATACATTTTAACTCTATATGTC  422

seq1  AGTAATGAACACTTTGAAACCAATATTTAAAACATAACGCTTCTCTGCTC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAATGAACACTTTGAAACCAATATTTAAAACATAACGCTTCTCTGCTC  472

seq1  ACTGTGGCTCTGTTCCGACCTTGCAGCGGCGGTATTGGCCTGGCTTCTGG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTGGCTCTGTTCCGACCTTGCAGCGGCGGTATTGGCCTGGCTTCTGG  522

seq1  AATGGACAGAGTCCACCAGGAAAGACTGGGGTCGCGAGGAGCTGGGGAGG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGACAGAGTCCACCAGGAAAGACTGGGGTCGCGAGGAGCTGGGGAGG  572

seq1  GAGGGGCCCTGTCTGCGGAAGGTAGGGTTAGATCATTAGCTCAGTGACCT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGGCCCTGTCTGCGGAAGGTAGGGTTAGATCATTAGCTCAGTGACCT  622

seq1  CCTAGGGTTTCCATGTGCTGTGTTCTCATCCTATAGCTGGTTTGGTAATG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGGGTTTCCATGTGCTGTGTTCTCATCCTATAGCTGGTTTGGTAATG  672

seq1  ATCTGCAAGTCCCGGTGAGCAACAGCACAGCTCCGCCTGACGCTCTCATT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGCAAGTCCCGGTGAGCAACAGCACAGCTCCGCCTGACGCTCTCATT  722

seq1  AAAATCCATGCAGCCAAACTCTGCACGTTGTAGCAGCCTTGCAGAGCCTT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCCATGCAGCCAAACTCTGCACGTTGTAGCAGCCTTGCAGAGCCTT  772

seq1  GCAGAGCCTCGCAGAGCCTTCTCAGCTTGGGGGGCTGGGGACCCAGTCAG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAGCCTCGCAGAGCCTTCTCAGCTTGGGGGGCTGGGGACCCAGTCAG  822

seq1  CTGAGAGGCCGTCTAGGCTCTACATAGGTATATGTGTACAAAGGAAATTT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGAGGCCGTCTAGGCTCTACATAGGTATATGTGTACAAAGGAAATTT  872

seq1  TCTTTTAAAACATGTTTCTTTAAGCCCTTTTAAGTAATAAAGGACCCAGT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTAAAACATGTTTCTTTAAGCCCTTTTAAGTAATAAAGGACCCAGT  922

seq1  GCAGGTGGGTGTGTTTGTGGAATTCTGTAAGCGTAGAATACAAAGTTTAG  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGTGGGTGTGTTTGTGGAATTCTGTAAGCGTAGAATACAAAGTTTAG  972

seq1  TGACTATTTGAACTGGGCTGAGGCTGGTAAGACTATAAAGCAGCGGCCCA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTATTTGAACTGGGCTGAGGCTGGTAAGACTATAAAGCAGCGGCCCA  1022

seq1  TAAGGACTCTTAAGCGCTGGAGCAAAGGAGCCGCCCCGCTTCCCGCTTCC  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGACTCTTAAGCGCTGGAGCAAAGGAGCCGCCCCGCTTCCCGCTTCC  1072

seq1  CAGTCTGCCTAGCCCAGCGGGGGCTGCCCCCATTCCTATAGCCCAGGGAC  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCTGCCTAGCCCAGCGGGGGCTGCCCCCATTCCTATAGCCCAGGGAC  1122

seq1  CCAGCTTGCAATTGGTAGTGTCAGACGTGGCATGTAGCTTTGCCTTGGTT  1197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCTTGCAATTGGTAGTGTCAGACGTGGCATGTAGCTTTGCCTTGGTT  1172

seq1  GTGAGATGATTTCATGGGGGGGGGGGGGGGAATTC  1232
      |||||||||||||||||||||||||||||||||||
seq2  GTGAGATGATTTCATGGGGGGGGGGGGGGGAATTC  1207