BAC Information

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BAC

Clone NameB6Ng01-086A10
Chromosome10 (Build37)
Map Location 17,912,395 - 18,063,708
singlet/doubletdoublet
Overlap geneLOC100039660, Ccdc28a, LOC627646
Upstream geneCited2, Txlnb, LOC665321, Heca, 3110003A17Rik, Reps1
Downstream geneNhsl1, Hebp2, EG627729, D10Bwg1379e, EG237300, Perp, Tnfaip3, Tpi-rs5, EG637620
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-086A10.bB6Ng01-086A10.g
ACCDH899534DH899535
length7461,122
definitionDH899534|Mus musculus domesticus DNA, BAC clone: B6Ng01-086A10, 5' end.DH899535|Mus musculus domesticus DNA, BAC clone: B6Ng01-086A10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(18,062,963 - 18,063,708)(17,912,395 - 17,913,520)
sequence
gaattctgaattcatcaagcaaccaacaaatattaattaaaatatacacg
cattccaacggatgaagagtgtgaattttttcaaaacaccgggatcacag
agctaaccacaaaagcttttagagaaaagaggatctcaaaggatcagatg
ccaaggcctgagcctatacagcaatgctgggaaggagattaaagagcctg
gcagaaggatatctccaaaatacgggggtgaggggctgtgttagcctagc
aaagtcactaattaaaggagggggagacaagcgaacactgtcaactaacc
tttcccaggaagcttccaggggccggatggatccactgccgtggcttaga
tatgaaatatccttcaaaagcttggtccccaaaacagtcatactgcttgg
actttaggtcccccaatcaatggattaatccattgatgaattcatacttg
aatgggccagtgagaggtggcagaaagtaccagaggcggggtctgattag
aagtagggtttgggaggcgggcctctgaagtctccctccccacaccctcc
atcctctctctcatccttcctgttcccctcccccaccccactctctctcc
cttctccttacgggatgccaagagatgaacaacattcttttttttttcct
cgttttttcgagacagggtttctctgtatattcctggctgtcctggaact
cactttgaagatcaggctggcctctaacttaaatatccgcctgcct
gaattcaatccaatcctgagatgccttcaaccttcaggcccctgggtgtg
cagtaatcagcaatactcgggcatttaataccagagtgggattgtgggca
gagaaaagagaaacaacagaatggctctggtgggaaggtaatgaagtatg
taaagcctcggtggaaatggagaagagacaagggacgatttccgtagcag
aattttccctgtcctatcactgtatatattagtacaacaagaagcctgtg
attggacatggaaaagagacataagagttgcagagacagagaaggaggag
acaggtagaggaaggaaggaagatggagcaggaggaagacgatccagatt
ctgtgtggctttaagtagccacaggtagctgtgactataagaggaggata
gaataactggggtaatttgtctaatctaggtggaccgcttgtatcattaa
ttgtctctgaaattactgtgtgggcatcttgtgaattgagaatgtattga
tatataaatctgactgattcattataagattctagagttttgatttactg
ggttactggaatttgggaccatcagccacaggggtttatggctgagaagg
tacaggaggctaggaggctggcaaactgaagaagggaagactgcctagct
agaggcggctcgagaccacagggcggagagtagctgggtgtagctcggga
acttgccattcttttaaatatttcccacaacagtttcctgccttccacat
caatcacactctcctgtacactggagatgtactgcggctagctctcgaca
taagagcagtttagacaaacaaggtaccgtagtgataacatcacgtgtgt
ggtggttctacgtgattcagggagactttaaacacaatagaactgagcca
ctgagaatgtagggactgagaacttccatgcagacttgcttaacacgtcc
actggtctcactctcctcctacacgacagcttcaggagtctggtttcccc
tttgcttttaaacttaaccatttcttgttgggaggagctaaagaggatgg
ctcagtggttaagggctctgatgcttttacaaagggacagggctctgttt
ccagcacctacgtgggtgactc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_18062963_18063708
seq2: B6Ng01-086A10.b_45_790 (reverse)

seq1  AGGCAGGCGGATTTCTGAGTTTGAGGCCAGCCTGGTCTTCAAAGTGAGTT  50
      |||||||||||| | | |||| |||||||||||| |||||||||||||||
seq2  AGGCAGGCGGATATTTAAGTTAGAGGCCAGCCTGATCTTCAAAGTGAGTT  50

seq1  CCAGGACAGCCAGGAATATACAGAGAAACCCTGTCTCGAAAAAACGAGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGACAGCCAGGAATATACAGAGAAACCCTGTCTCGAAAAAACGAGGA  100

seq1  AAAAAAAAAGAATGTTGTTCATCTCTTGGCATCCCGTAAGGAGAAGGGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAGAATGTTGTTCATCTCTTGGCATCCCGTAAGGAGAAGGGAG  150

seq1  AGAGAGTGGGGTGGGGGAGGGGAACAGGAAGGATGAGAGAGAGGATGGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGTGGGGTGGGGGAGGGGAACAGGAAGGATGAGAGAGAGGATGGAG  200

seq1  GGTGTGGGGAGGGAGACTTCAGAGGCCCGCCTCCCAAACCCTACTTCTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTGGGGAGGGAGACTTCAGAGGCCCGCCTCCCAAACCCTACTTCTAA  250

seq1  TCAGACCCCGCCTCTGGTACTTTCTGCCACCTCTCACTGGCCCATTCAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGACCCCGCCTCTGGTACTTTCTGCCACCTCTCACTGGCCCATTCAAG  300

seq1  TATGAATTCATCAATGGATTAATCCATTGATTGGGGGACCTAAAGTCCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAATTCATCAATGGATTAATCCATTGATTGGGGGACCTAAAGTCCAA  350

seq1  GCAGTATGACTGTTTTGGGGACCAAGCTTTTGAAGGATATTTCATATCTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTATGACTGTTTTGGGGACCAAGCTTTTGAAGGATATTTCATATCTA  400

seq1  AGCCACGGCAGTGGATCCATCCGGCCCCTGGAAGCTTCCTGGGAAAGGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCACGGCAGTGGATCCATCCGGCCCCTGGAAGCTTCCTGGGAAAGGTT  450

seq1  AGTTGACAGTGTTCGCTTGTCTCCCCCTCCTTTAATTAGTGACTTTGCTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGACAGTGTTCGCTTGTCTCCCCCTCCTTTAATTAGTGACTTTGCTA  500

seq1  GGCTAACACAGCCCCTCACCCCCGTATTTTGGAGATATCCTTCTGCCAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTAACACAGCCCCTCACCCCCGTATTTTGGAGATATCCTTCTGCCAGG  550

seq1  CTCTTTAATCTCCTTCCCAGCATTGCTGTATAGGCTCAGGCCTTGGCATC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTAATCTCCTTCCCAGCATTGCTGTATAGGCTCAGGCCTTGGCATC  600

seq1  TGATCCTTTGAGATCCTCTTTTCTCTAAAAGCTTTTGTGGTTAGCTCTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCCTTTGAGATCCTCTTTTCTCTAAAAGCTTTTGTGGTTAGCTCTGT  650

seq1  GATCCCGGTGTTTTGAAAAAATTCACACTCTTCATCCGTTGGAATGCGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCCGGTGTTTTGAAAAAATTCACACTCTTCATCCGTTGGAATGCGTG  700

seq1  TATATTTTAATTAATATTTGTTGGTTGCTTGATGAATTCAGAATTC  746
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTTTAATTAATATTTGTTGGTTGCTTGATGAATTCAGAATTC  746

seq1: chr10_17912395_17913520
seq2: B6Ng01-086A10.g_66_1187

seq1  GAATTCAATCCAATCCTGAGATGCCTTCAACCTTCAGGCCCCTGGGTGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATCCAATCCTGAGATGCCTTCAACCTTCAGGCCCCTGGGTGTG  50

seq1  CAGTAATCAGCAATACTCGGGCATTTAATACCAGAGTGGGATTGTGGGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAATCAGCAATACTCGGGCATTTAATACCAGAGTGGGATTGTGGGCA  100

seq1  GAGAAAAGAGAAACAACAGAATGGCTCTGGTGGGAAGGTAATGAAGTATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAAAGAGAAACAACAGAATGGCTCTGGTGGGAAGGTAATGAAGTATG  150

seq1  TAAAGCCTCGGTGGAAATGGAGAAGAGACAAGGGACGATTTCCGTAGCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGCCTCGGTGGAAATGGAGAAGAGACAAGGGACGATTTCCGTAGCAG  200

seq1  AATTTTCCCTGTCCTATCACTGTATATATTAGTACAACAAGAAGCCTGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTCCCTGTCCTATCACTGTATATATTAGTACAACAAGAAGCCTGTG  250

seq1  ATTGGACATGGAAAAGAGACATAAGAGTTGCAGAGACAGAGAAGGAGGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGACATGGAAAAGAGACATAAGAGTTGCAGAGACAGAGAAGGAGGAG  300

seq1  ACAGGTAGAGGAAGGAAGGAAGATGGAGCAGGAGGAAGACGATCCAGATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGTAGAGGAAGGAAGGAAGATGGAGCAGGAGGAAGACGATCCAGATT  350

seq1  CTGTGTGGCTTTAAGTAGCCACAGGTAGCTGTGACTATAAGAGGAGGATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTGGCTTTAAGTAGCCACAGGTAGCTGTGACTATAAGAGGAGGATA  400

seq1  GAATAACTGGGGTAATTTGTCTAATCTAGGTGGACCGCTTGTATCATTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAACTGGGGTAATTTGTCTAATCTAGGTGGACCGCTTGTATCATTAA  450

seq1  TTGTCTCTGAAATTACTGTGTGGGCATCTTGTGAATTGAGAATGTATTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCTCTGAAATTACTGTGTGGGCATCTTGTGAATTGAGAATGTATTGA  500

seq1  TATATAAATCTGACTGATTCATTATAAGATTCTAGAGTTTTGATTTACTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATAAATCTGACTGATTCATTATAAGATTCTAGAGTTTTGATTTACTG  550

seq1  GGTTACTGGAATTTGGGACCATCAGCCACAGGGGTTTATGGCTGAGAAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTACTGGAATTTGGGACCATCAGCCACAGGGGTTTATGGCTGAGAAGG  600

seq1  TACAGGAGGCTAGGAGGCTGGCAAACTGAAGAAGGGAAGACTGCCTAGCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGGAGGCTAGGAGGCTGGCAAACTGAAGAAGGGAAGACTGCCTAGCT  650

seq1  AGAGGCGGCTCGAGACCACAGGGCGGAGAGTAGCTGGGTGTAGCTCGGGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGCGGCTCGAGACCACAGGGCGGAGAGTAGCTGGGTGTAGCTCGGGA  700

seq1  ACTTGCCATTCTTTTAAATATTTCCCACAACAGTTTCCTGCCTTCCACAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGCCATTCTTTTAAATATTTCCCACAACAGTTTCCTGCCTTCCACAT  750

seq1  CAATCACACTCTCCTGTACACTGGAGATGTACTGCGGCTAGCTCTCGACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCACACTCTCCTGTACACTGGAGATGTACTGCGGCTAGCTCTCGACA  800

seq1  TAAGAGCAGTTTAGACAAACAAGGTACCGTAGGTGATAACATCACGTGTG  850
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TAAGAGCAGTTTAGACAAACAAGGTACCGTA-GTGATAACATCACGTGTG  849

seq1  TGGTGGTTCTACGTGATTCAGGGAGACTTTAAACACAATAGAACTGAGCC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGGTTCTACGTGATTCAGGGAGACTTTAAACACAATAGAACTGAGCC  899

seq1  ACTGAGAATGTAGGGACTGAGAACTTCCATGCAAGACTTGCTTAACACGT  950
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  ACTGAGAATGTAGGGACTGAGAACTTCCATGC-AGACTTGCTTAACACGT  948

seq1  CCACTGGTCTCCACCTCTCCCCCTACACGACAGCTTCAGGAGTCTGGTTT  1000
      |||||||||||   |||||| |||||||||||||||||||||||||||||
seq2  CCACTGGTCTC--ACTCTCCTCCTACACGACAGCTTCAGGAGTCTGGTTT  996

seq1  CCCCTTTGCTTTTAAACTTAACCATTTCTTGTTTGGGAGGAGCCTAGAGA  1050
      ||||||||||||||||||||||||||||||| |||||||||| ||| |||
seq2  CCCCTTTGCTTTTAAACTTAACCATTTCTTG-TTGGGAGGAG-CTAAAGA  1044

seq1  -GATGGCTCAGTGGTTAAGGGCTCTGAGTGCTTTTACAAAGGGACA-GGC  1098
       |||||||||||||||||||||||||| |||||||||||||||||| |||
seq2  GGATGGCTCAGTGGTTAAGGGCTCTGA-TGCTTTTACAAAGGGACAGGGC  1093

seq1  TCTGTTCCCAGCACCTACGT-GGTGACTC  1126
      |||||| ||||||||||||| ||||||||
seq2  TCTGTTTCCAGCACCTACGTGGGTGACTC  1122