BAC Information

Click to search

BAC

Clone NameB6Ng01-086B22
Chromosome10 (Build37)
Map Location 104,054,164 - 104,054,569
singlet/doubletsinglet
Overlap genenone
Upstream geneEG627488, EG667692, EG667695, LOC100043292
Downstream geneLOC100042383, Tmtc2, EG627573
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-086B22.bB6Ng01-086B22.g
ACCDH899605DH899606
length1,220878
definitionDH899605|Mus musculus domesticus DNA, BAC clone: B6Ng01-086B22, 5' end.DH899606|Mus musculus domesticus DNA, BAC clone: B6Ng01-086B22, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttacctgaggaatattgaatggttgagaagtacctgaaaaaaat
gttcagcatccttaatcttcagggaactgcaaatcaaaacaaccctgaga
tttgtctcacaccagtcagaagggctatgttcaaaaattcaggtgacatc
agatgcgggtgaggatgtgcagaaagaggaacactccttcatttttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggtggttcctca
gaaaattggacatagcactaacagaggatcccgcaatatctctcctggac
atatatccagaagatgttccaactggtaagaaggacacatgcttcactat
gttcatagcagccttatttataatagccataagctggaaagaactcagat
gcccctcaacagaggaatggatacagaaaatgtggtacatttacacaacg
gagtactgatctgttattaaaaagaatgaatttatgaaattcctaggcaa
atggatggacctgtgccgcagaccctctgggcccctttgtctgcatggaa
tgggtctctagtcacgggtggacaaagcatcggatgaattgacaggtgca
cacgggagaggttgtgttggatctgaatgtaatttctcaaatcgagcatc
agacttttttatacagaagacaataaggaagttgggtgacatacccgcaa
ggtacaaatgaggtaaccggatgcttaatgactcttacacagaacagaga
aatgaaaatgcaaagactggcaggaactgttcaataaaataactgagaca
aagtcagccctatctaaggtcagctatagacttagaagccaggtgtgaga
acttttcactcctagggcaagggctttcacacccaagtcatgggttctag
ttagggagttccgttctagctaaacatctcttgagtaatgtaatactcta
aaccacagcccgatctacttcctaaaccattgtaaattcctgtatatagg
tgtaactcagctataattctaagtatctattctggtttctctacggtcag
aaacgtcttcatcctgggtgatgggtaagaattcctgggtgaagggcagt
gacttaacttttgggctatccctggaatgttcactgtctagcctcaggac
cattcttaggaacttgaacctggcggaggcttactatgtcgaatccaatt
cttaaaaaggtatgaattac

gaattcatttggaataacaaaaatcccagaatagtaaaaactattcataa
caataaaataacttctgggggaattgacatccctgaactcaagctgtctt
acagagcagaagtgttaaaaacttcatggtatttgtacagtgacagatag
gaacagaactgaagacctgaaaattaatgcacacacctatgggcacttga
tctttgacaaagaaactacaaccattctctggaaaaaagacagaatttca
acaaatggtggtggttcaagtggcaatcagcaggtagaacaatggaaatc
aatccattaatatgttcttgtacaaatttcaagtgcaagtagatcaagaa
tctccacataaaaccatatacgttgaaactaaaagaaaagaacatggata
agagcctccacacacagaggtaattttccagaacagaacacgagtagctt
atgctctaagatcaaatattgaccaatgggacctcataaaattgcaatgt
ttctataagtcaaagggcattaccaataacacaaaatggcaactaaaaga
ttaggaaaagatctttacaaatcctaaatgtgatagagggctgatagcca
atatataaaagaacttaagaagttagactccagagaaccaaataacccca
ttaataatggggtacagagataaacaaaaagctttcaactgaggaatact
gaatgcctgagaagcacatgaagaaatattcaacatccatagtcatcagg
ggaatgcaaatcagaacaaccctgagattcgacctcacaccagtcagaat
ggctaagatcaaaatctcatgtgacagcagatgctggcaaggatgtggag
aaagaggaacactccctccattgtggtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_104054164_104054569
seq2: B6Ng01-086B22.g_542_945 (reverse)

seq1  CACCAACAATGGA-GGAGTGTTCCTCTTTCTCCACATCCTCGCCAGCATC  49
      |||| |||||||| |||||||||||||||||||||||||| |||||||||
seq2  CACC-ACAATGGAGGGAGTGTTCCTCTTTCTCCACATCCTTGCCAGCATC  49

seq1  TGCTGTCACCTGAATTTTTGATCTTAGCCATTCTGACTGGTGTGAGGTGG  99
      ||||||||| |||  ||||||||||||||||||||||||||||||||| |
seq2  TGCTGTCACATGAGATTTTGATCTTAGCCATTCTGACTGGTGTGAGGTCG  99

seq1  AATCTCAGGGTTGTTTTGATTTGCATTTCCCTGATGATTAAGGATGTTGA  149
      ||||||||||||||| ||||||||||| ||||||||| || |||||||||
seq2  AATCTCAGGGTTGTTCTGATTTGCATTCCCCTGATGACTATGGATGTTGA  149

seq1  ACATTTTTTCAGGTGCTTCTCTGCCATTCGGTATTCCTCAGGTGAGAATT  199
      | |||| |||| ||||||||| | ||||| ||||||||||| ||| |  |
seq2  ATATTTCTTCATGTGCTTCTCAGGCATTCAGTATTCCTCAGTTGAAAGCT  199

seq1  CTTTGTTCAGTTCTGAGCCCCATTTTTTAATAGGGTTATTTGATTTTCTG  249
       |||||| |  ||||  ||||| || ||||| |||||||||| || ||||
seq2  TTTTGTTTATCTCTGTACCCCA-TTATTAATGGGGTTATTTGGTTCTCTG  248

seq1  AAGTCCACCTTCTTGAGTTCTTTATATATGTTGGATATTAGTCCCCTATC  299
       |||| | |||||| |||||||| ||||| |||| ||| || || |||||
seq2  GAGTCTAACTTCTTAAGTTCTTT-TATATATTGGCTATCAGCCCTCTATC  297

seq1  TGAATTAGGATAGGTAAAGATCCTTTCTCAATCTGTTGGTGGTCTTTTTG  349
        | |||||||  ||||||||| ||||  ||||| || || | | |||||
seq2  ACATTTAGGATTTGTAAAGATCTTTTCCTAATCTTTTAGTTGCCATTTTG  347

seq1  TCTTATTGACGGTGTCTTTTGCCTTGCAGAAGCTTTGCAATTTTATGAGG  399
      | ||||||    || | |||| |||  |||| | ||||||||||||||||
seq2  TGTTATTGGTAATGCCCTTTGACTTATAGAAACATTGCAATTTTATGAGG  397

seq1  TCCCATT  406
      |||||||
seq2  TCCCATT  404


| Home | SequenceCutter | Blast | Download |