BAC Information

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BAC

Clone NameB6Ng01-086J17
Chromosome10 (Build37)
Map Location 35,353,340 - 35,354,544
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC667824
Downstream geneLOC100041585, LOC667860, Hs3st5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-086J17.bB6Ng01-086J17.g
ACCDH899957DH899958
length1,1941,178
definitionDH899957|Mus musculus domesticus DNA, BAC clone: B6Ng01-086J17, 5' end.DH899958|Mus musculus domesticus DNA, BAC clone: B6Ng01-086J17, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatcattttcattagctaaatagtactacattgtgtaaatgtccc
acattttctgtatccattcctctgttggaggacatctgggttctttccag
cttctggatattataaatatggctgctatgaacatattggaccatgtgtc
cttgttatatgttggagcatcttttggatatatgcccagaaatgatacag
attccatttgcttcttagactattacaaattaccacagctctttaacatt
acatgtttaataagccataacattttagaaaataagggacatatttatga
aaggaaacatttgttttataaaattttcataatgttccaattgctggcta
ggtgtgaaatggacagaaacatgggattcagaacaaataatccgtttgtg
aatcaaatgaaattagaaactgatccatgccaaaaatcccagtaaagatc
atacaaagtatttttttaaagaaattggttatttcattaaatgaatgatt
cctagatctgaaactagactgagttcaaattaaaatagaagccttacttt
tatctctcaattttccagtcctcaaagcaagaatattatgtacttccctg
caatgtgtgtgttctttaaaaactatctgcatgtcaaaacataatgcttc
ctttcccacacaaaatgttattatccagagtacttagtcaagtttgtttt
cttttcttgttaaagaattaaaaggcaagaaaaaacaggcacacaccagg
taacagggaaagtctacaacagagcaaagaaaatcaactaaagaaaaggt
tttcataggggctaaaaatcactcatatacacagtgagcaccagcagaca
atgaccctctgaagaacaaagggataactcatgaaaccagaaatgtaatg
tctccttgaagacttaaaatttctctcgtggacaggtgtccgcctggctt
gggaggcggctcagcctcagcagcagcagtcgccatcttggttctgggac
tcagcagaacttaggaaattagtctgaacaggttagagggtgtgccagag
aaccggagagcttctgggacagcagaagcacagagcgctgagcagtaccc
ttgcaagcctgcagaacaggcggctacgtcagaacagagccgggttcggc
tagcttgggagggcgcctagcctcagaacatgttcgccatcttg
gaattcactctcctgaagcattcaccactggatcttagatgtgcctgggt
ggccagacacatgtagcctcagcttctgcctctagcaggccacccaaacc
gcatcatttctctttctcctctttcttttcctcctccttttccttgttta
ttaattaattaattaattaattaatatttaaaatgttgttcctcttcaaa
gtccacctctacaagtccccctcccttcctctttgtctctaagaaggtgc
tctgctccctacccatctactcccatctcacccaggtagtatcacctttc
tggaccaagcacatctccccccaccccacccccactggggccagaaaagg
ctacatatatagcaaggaccacagaccagcccatgtatttatgctatttg
attggtagcttactgtctggaatctctaaggggtccaattagttgacact
tttgttcttcttatgaggttgtaatcccttcagctccttcagtccttccc
ctaactcttccatggggttcctgagctcagtccaaataattggctgtaag
tatctgcgttggtcttagatgctggtaaggcctgtaagaggacagccatg
ctaggctcctgtctgcaagcacatcttggcatcagcaatagtgtcagagt
ttggtgcctgtgcatgggatacatcccaactggggacatatctatctact
ggaggtgttctcttcaggtttcatcccctcactgttgggcatttcagcta
aggccattcccccattagatcctagaagcatatcaaatccctgggctctg
ggactttgtagagatcctccccctactgcatatttgtattcattctgatg
gccctctaggcttctcttctgtctacccccataccagatcattgccctcc
tttcccactgcctttcccctctcccacccaggttccttcctttctctgtc
tcctgtgattattttattcccccttctatgtgggatgaacatccgcactt
gacttctttctttttagatcataggtctgtgactgtatcacagtatctga
cttttgctattatcactatcagtaatgcaaattattatttcttgggctgg
tacttcacttgaatgaatttctattcatcatgctgcaactcaggagtctc
aatttaaggcgctgaaattaatggttcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_35353340_35354544
seq2: B6Ng01-086J17.b_41_1234

seq1  GAATTCATCATTTTCATTAGCTAAATAGTACTACATTGTGTAAATGTCCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCATTTTCATTAGCTAAATAGTACTACATTGTGTAAATGTCCC  50

seq1  ACATTTTCTGTATCCATTCCTCTGTTGGAGGACATCTGGGTTCTTTCCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTTCTGTATCCATTCCTCTGTTGGAGGACATCTGGGTTCTTTCCAG  100

seq1  CTTCTGGATATTATAAATATGGCTGCTATGAACATATTGGACCATGTGTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGGATATTATAAATATGGCTGCTATGAACATATTGGACCATGTGTC  150

seq1  CTTGTTATATGTTGGAGCATCTTTTGGATATATGCCCAGAAATGATACAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTTATATGTTGGAGCATCTTTTGGATATATGCCCAGAAATGATACAG  200

seq1  ATTCCATTTGCTTCTTAGACTATTACAAATTACCACAGCTCTTTAACATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCATTTGCTTCTTAGACTATTACAAATTACCACAGCTCTTTAACATT  250

seq1  ACATGTTTAATAAGCCATAACATTTTAGAAAATAAGGGACATATTTATGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGTTTAATAAGCCATAACATTTTAGAAAATAAGGGACATATTTATGA  300

seq1  AAGGAAACATTTGTTTTATAAAATTTTCATAATGTTCCAATTGCTGGCTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAACATTTGTTTTATAAAATTTTCATAATGTTCCAATTGCTGGCTA  350

seq1  GGTGTGAAATGGACAGAAACATGGGATTCAGAACAAATAATCCGTTTGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTGAAATGGACAGAAACATGGGATTCAGAACAAATAATCCGTTTGTG  400

seq1  AATCAAATGAAATTAGAAACTGATCCATGCCAAAAATCCCAGTAAAGATC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAAATGAAATTAGAAACTGATCCATGCCAAAAATCCCAGTAAAGATC  450

seq1  ATACAAAGTATTTTTTTAAAGAAATTGGTTATTTCATTAAATGAATGATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAAAGTATTTTTTTAAAGAAATTGGTTATTTCATTAAATGAATGATT  500

seq1  CCTAGATCTGAAACTAGACTGAGTTCAAATTAAAATAGAAGCCTTACTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGATCTGAAACTAGACTGAGTTCAAATTAAAATAGAAGCCTTACTTT  550

seq1  TATCTCTCAATTTTCCAGTCCTCAAAGCAAGAATATTATGTACTTCCCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTCTCAATTTTCCAGTCCTCAAAGCAAGAATATTATGTACTTCCCTG  600

seq1  CAATGTGTGTGTTCTTTAAAAACTATCTGCATGTCAAAACATAATGCTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGTGTGTGTTCTTTAAAAACTATCTGCATGTCAAAACATAATGCTTC  650

seq1  CTTTCCCACACAAAATGTTATTATCCAGAGTACTTAGTCAAGTTTGTTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCCACACAAAATGTTATTATCCAGAGTACTTAGTCAAGTTTGTTTT  700

seq1  CTTTTCTTGTTAAAGAATTAAAAGGCAAGAAAAAACAGGCACACACCAGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCTTGTTAAAGAATTAAAAGGCAAGAAAAAACAGGCACACACCAGG  750

seq1  TAACAGGGAAAGTCTACAACAGAGCAAAGAAAATCAACTAAAGAAAAGGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAGGGAAAGTCTACAACAGAGCAAAGAAAATCAACTAAAGAAAAGGT  800

seq1  TTTCATAGGGGCTAAAAATCACTCATATACACAGTGAGCACCAGCAGACA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATAGGGGCTAAAAATCACTCATATACACAGTGAGCACCAGCAGACA  850

seq1  ATGACCCTCTGAAGAACAAAGGGATAACTCAGGAAACCAGAAATGTAATG  900
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  ATGACCCTCTGAAGAACAAAGGGATAACTCATGAAACCAGAAATGTAATG  900

seq1  TCTCCTTGAAGACTTAAAATTTCTCTCGTGGACAGGTGTCCGCCTGGCTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTTGAAGACTTAAAATTTCTCTCGTGGACAGGTGTCCGCCTGGCTT  950

seq1  GGGAGGCGGCCTCAGCCTCAGCAGCAGCAGTCGCCATCTTGGTTCTGGGA  1000
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGGCGG-CTCAGCCTCAGCAGCAGCAGTCGCCATCTTGGTTCTGGGA  999

seq1  CTCAGCAGAACTTAGGAAATTAGTCTGAACAGGTTAGAGGGTGTGCCAGA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGCAGAACTTAGGAAATTAGTCTGAACAGGTTAGAGGGTGTGCCAGA  1049

seq1  GAACCGGAGAGCTTCTGGGACAGGCAGAAGCACAGAGCCGCTGAGGCAGT  1100
      |||||||||||||||||||||| |||||||||||||| |||||| |||||
seq2  GAACCGGAGAGCTTCTGGGACA-GCAGAAGCACAGAG-CGCTGA-GCAGT  1096

seq1  ACCCTTTGCAGGCTGCAG-ACAGCCGGCCACCGTCCAGACCAGAGGACAG  1149
      ||||||   || |||||| |||| |||| | ||| |||| |||||  | |
seq2  ACCCTTGCAAGCCTGCAGAACAGGCGGCTA-CGT-CAGAACAGAG--CCG  1142

seq1  GTGTCCGCCTAGCTTGGGAGGCGGCCTCAGCCTCAGGAGCAGTGGTCGCC  1199
      | || || |||||||||||||  |||| ||||||| || || || |||||
seq2  G-GTTCGGCTAGCTTGGGAGGGCGCCT-AGCCTCA-GAACA-TGTTCGCC  1188

seq1  ATCTTG  1205
      ||||||
seq2  ATCTTG  1194