BAC Information

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BAC

Clone NameB6Ng01-086P19
Chromosome10 (Build37)
Map Location 66,065,712 - 66,066,856
singlet/doubletsinglet
Overlap genenone
Upstream gene1700023F02Rik, 4930407I19Rik
Downstream geneReep3, Jmjd1c, Nrbf2, Egr2, Gm237, LOC100040081
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-086P19.bB6Ng01-086P19.g
ACCDH900240DH900241
length1,1421,197
definitionDH900240|Mus musculus domesticus DNA, BAC clone: B6Ng01-086P19, 5' end.DH900241|Mus musculus domesticus DNA, BAC clone: B6Ng01-086P19, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctacaagatcgagaaaggcaacacccagaattttcaaatacactg
ggtattagccaggaaagtcggggccccagagcacagctgaagaatttaaa
atagagaagcaaggagagagggatgaggtaaaatccctaggttgtgtgaa
acatcgcatctcaaaggaagagctttgtcctgtctgtcacattcttgact
tgcccccccaccccctcgcttctttcccattcttacctaaatcactgctt
ttctcagaaggcaatatttataaggtataacaccagactcattaccaagg
gcttatagacctgtgtcagcaagatgtcatatcccaccctttccacccag
cctcattggagagtttccactgacctggttccctgattcaacatgagaat
atgagccttccaaagaagcccggagtgaaagtacctggccactccccatt
tggaaataatcggtcctttcatattctttcaccaacaaagagcatgtctc
atcactgcttggctgtggcacaagaccttcaggtgctgccatgacatgtc
agacagtaaacaccctccctctcattgtggcatttgctgtgttgtggggg
acatccacactgatgtaggtaatcacataaactgggaactaactgaagaa
tggtaaggacactgaaggaaagctgtaggacactgggagtattcataagg
gacactgcttaatcaagaaaacagaacgaaggggtgacattgagctgcaa
tctaaagaacagaggctttcaagcagcaacttgtctagcacaagttcggc
cctgagattttcacctaaatctccaggtgctgatggcttcagacgatctc
taaactggaagtggcagtagccaataagaaagctctagggtgctggtgtt
gtgcattgggttgcttcccttacactgccaccaggatggcttgataggag
tctccgcattctttggacaagtttgccatagatttccctggctttatttc
ataggtgggaccgtcaaagagaaaggatgtgaatatttcaaacagtgtta
ggacattttctctttctaaaaaatatgcagaattagctgttttgttcaga
gccattggacctcctgagcccaggaagtcactgaatgaagtc
gaattcagaacttttcagctggggaacgagagtaccagtgagtatagctt
tacgaggtaagcctggtcttgaactttctaacgaaattcaagacagtcta
tcagaagtaaagtgggaaatggctttacaaggtatatttggccttgaatt
ttttctggtgttaggagcccttttgttccttttcacatgttatcaagtgg
ttaaggcagggcggattctagatgaaattcaggacaatctatcagaagta
aagcggggagagagagtaggagcaaagagaaaatatggtacacaaaataa
gtatacaggcctttccaagggtcttgaacccgaggaaaagtttaggtcag
gtaagaatacctggggagagattagaaggaaggaaaagaaaaaagaaaag
aaaaaagatcgattagcggaggtctctaggagatactcgtcactagatga
gctcaggaagccagctcttagtagctctgaagcagatgaagaattctcct
ctgaagaaacagactgggaggaagaagcagctcattatgagaaaaaaggg
taccagccaggtaaagtgctagctaatcagttaaggaagccaaaagcggc
tggcgaaggccagtttgctgattggcctcagggcagtcggcttcaaggtc
cgccctatgcggagcccccgccctgcgtagtgcgtcagcaatgcgcagag
aggcaatgcgcagagagatgcgcagagaggcagtgcgcagagaggcagtg
cgcagagaggcagtgcgcagactcattcattcccagagaggaacaaagga
aaatacaacaggcatttccagtctttgaaggagccgagggtgggcgtgtc
cacgctccggtagaatacttacagattaaagagcttgccgagtcggtccg
taaatatggaacccaatgctaattttaccttgggtgcagttagacaggct
tgccggcatggcactaactcctgccgactgggcaaacgggttgtaaaagc
cgcctcttccctagtatgggcaaataatatggaatggagagctctttggc
atgaactgccaacaagcgcagtccgagcaaacgcagctgccttgactcca
gaagcagaaagagaattggaaacttttgaactgtaaccgggtcagggagc
cttattctggcctgaatcaacatacttacatccactttggtggtggc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_66065712_66066856
seq2: B6Ng01-086P19.b_48_1189

seq1  GAATTCTACAAGATCGAGAAAGGCAACACCCAGAATTTTCAAATACACTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTACAAGATCGAGAAAGGCAACACCCAGAATTTTCAAATACACTG  50

seq1  GGTATTAGCCAGGAAAGTCGGGGCCCCAGAGCACAGCTGAAGAATTTAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATTAGCCAGGAAAGTCGGGGCCCCAGAGCACAGCTGAAGAATTTAAA  100

seq1  ATAGAGAAGCAAGGAGAGAGGGATGAGGTAAAATCCCTAGGTTGTGTGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAGAAGCAAGGAGAGAGGGATGAGGTAAAATCCCTAGGTTGTGTGAA  150

seq1  ACATCGCATCTCAAAGGAAGAGCTTTGTCCTGTCTGTCACATTCTTGACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCGCATCTCAAAGGAAGAGCTTTGTCCTGTCTGTCACATTCTTGACT  200

seq1  TGCCCCCCCACCCCCTCGCTTCTTTCCCATTCTTACCTAAATCACTGCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCCCCCACCCCCTCGCTTCTTTCCCATTCTTACCTAAATCACTGCTT  250

seq1  TTCTCAGAAGGCAATATTTATAAGGTATAACACCAGACTCATTACCAAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCAGAAGGCAATATTTATAAGGTATAACACCAGACTCATTACCAAGG  300

seq1  GCTTATAGACCTGTGTCAGCAAGATGTCATATCCCACCCTTTCCACCCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTATAGACCTGTGTCAGCAAGATGTCATATCCCACCCTTTCCACCCAG  350

seq1  CCTCATTGGAGAGTTTCCACTGACCTGGTTCCCTGATTCAACATGAGAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCATTGGAGAGTTTCCACTGACCTGGTTCCCTGATTCAACATGAGAAT  400

seq1  ATGAGCCTTCCAAAGAAGCCCGGAGTGAAAGTACCTGGCCACTCCCCATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGCCTTCCAAAGAAGCCCGGAGTGAAAGTACCTGGCCACTCCCCATT  450

seq1  TGGAAATAATCGGTCCTTTCATATTCTTTCACCAACAAAGAGCATGTCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAATAATCGGTCCTTTCATATTCTTTCACCAACAAAGAGCATGTCTC  500

seq1  ATCACTGCTTGGCTGTGGCACAAGACCTTCAGGTGCTGCCATGACATGTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACTGCTTGGCTGTGGCACAAGACCTTCAGGTGCTGCCATGACATGTC  550

seq1  AGACAGTAAACACCCTCCCTCTCATTGTGGCATTTGCTGTGTTGTGGGGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGTAAACACCCTCCCTCTCATTGTGGCATTTGCTGTGTTGTGGGGG  600

seq1  ACATCCACACTGATGTAGGTAATCACATAAACTGGGAACTAACTGAAGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCCACACTGATGTAGGTAATCACATAAACTGGGAACTAACTGAAGAA  650

seq1  TGGTAAGGACACTGAAGGAAAGCTGTAGGACACTGGGAGTATTCATAAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAAGGACACTGAAGGAAAGCTGTAGGACACTGGGAGTATTCATAAGG  700

seq1  GACACTGCTTAATCAAGAAAACAGAACGAAGGGGTGACATTGAGCTGCAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACTGCTTAATCAAGAAAACAGAACGAAGGGGTGACATTGAGCTGCAA  750

seq1  TCTAAAGAACAGAGGCTTTCAAGCAGCAACTTGTCTAGCACAAGTTCGGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAAGAACAGAGGCTTTCAAGCAGCAACTTGTCTAGCACAAGTTCGGC  800

seq1  CCTGAGATTTTCACCTAAATCTCCAGGTGCTGATGGCTTCAGACGATCTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAGATTTTCACCTAAATCTCCAGGTGCTGATGGCTTCAGACGATCTC  850

seq1  TAAACTGGAAGTGGCAGTAGCCAATAAGAAAGCTCTAGGGTGCTGGTGTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACTGGAAGTGGCAGTAGCCAATAAGAAAGCTCTAGGGTGCTGGTGTT  900

seq1  GTGCATTGGGTTGCTTCCCTTACACTGCCACCAGGATGGCTTGATAGGAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCATTGGGTTGCTTCCCTTACACTGCCACCAGGATGGCTTGATAGGAG  950

seq1  TCTCCGCATTCTTTGGACAAGTTTGCCATAGATTTCCCTGGCTTTTATTT  1000
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TCTCCGCATTCTTTGGACAAGTTTGCCATAGATTTCCCTGGC-TTTATTT  999

seq1  CATAGGTGGGACCGTCAAAGAGAAAGGATGTG-ATATTTCAAACAAGGTT  1049
      |||||||||||||||||||||||||||||||| ||||||||||||    |
seq2  CATAGGTGGGACCGTCAAAGAGAAAGGATGTGAATATTTCAAACA---GT  1046

seq1  GTTAGGACATTTTCTCCTTTCTAAAAATATTGCAGAAATTAGCTGTTTGT  1099
      ||||||||||||||| |||||||||||   ||||| ||||||||||||  
seq2  GTTAGGACATTTTCT-CTTTCTAAAAAATATGCAG-AATTAGCTGTTTTG  1094

seq1  TCCAGAGCCATT-GACCT-CTGAGCCCAGGAAGTCAACTG-ATGAAGTC  1145
      | |||||||||| ||||| |||||||||||||||| |||| ||||||||
seq2  TTCAGAGCCATTGGACCTCCTGAGCCCAGGAAGTC-ACTGAATGAAGTC  1142