BAC Information

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BAC

Clone NameB6Ng01-087B14
Chromosome10 (Build37)
Map Location 69,483,211 - 69,565,640
singlet/doubletdoublet
Overlap geneAnk3, Ccdc6
Upstream geneA930033H14Rik, Rhobtb1, LOC100040182, Cdc2a, LOC100039696, EG382371, LOC100039734, 5730416O20Rik
Downstream gene2310015B20Rik, Slc16a9, LOC632955, 1200015N20Rik, LOC665398, Phyhipl, EG665429, Bicc1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-087B14.bB6Ng01-087B14.g
ACCDH900321DH900322
length1,2501,085
definitionDH900321|Mus musculus domesticus DNA, BAC clone: B6Ng01-087B14, 5' end.DH900322|Mus musculus domesticus DNA, BAC clone: B6Ng01-087B14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(69,564,396 - 69,565,640)(69,483,211 - 69,484,315)
sequence
gaattctctaactagcccccatccctatcaaatgaataacaagaggatta
cagaagactacgtgacctcctccaacgttgggatgtcttgtagatggtgc
ctcacagaggtaaaacatggaactttccatgcagagtactcaaggcattc
tctttaagagctgtgtgcagacagatctaatgctgggctcccatttccct
aagagacggacgtgtcgtcagtgcacgcttctgtgagaacctaaacaaaa
tttatttttctacagaggagaaagacactccacctttctccaggggacat
tttaaagtctcaaaaatggaaaactgtgtctgaggctgcacagtacatta
tcccaaacacacgcaatgagctatgtgcagggtgtgcttccttgggtaag
gacaccacggttgatgagcgtcagcggttctgaacatgccaacgtctggc
tgttggttttggctaccacttcacaacacttttgttttgaactggaagag
atggctctgaggttaagagcactggctgctcttccagaggactctcttca
gtgcccagcacccacatggcaactcctatccatctctcaatgggctccag
tgccctcttctggcctctgagggcactgcacacatgtggtgcacatacat
gcatacaggtaaacacatatgaataaatctttaaaaaaaaaaacctttta
tgtctacactgacctaaacttctatagagaagggatctgttttacaatca
ggagatacacttaaatcttaatgaattattccaggcctttatttccaaac
taaagtttccgaatgtcagagcctatctagaaaagtcaggagtgcacagg
acgcagctgaacactgctcacacctatcaccccagcagctggctgagaac
tcctgggaccacccttcaactgtgcccccacacctgcccagaaaccatcc
acccctggaccaccctcaggctctgagtcagacaccagagaccacactct
tccaggatttgccccacactaacctggactaacacataacactatttgaa
ggggtgattaaacatttgggtttgtttatttcccactctaaaaaaaatgc
cattataatcagtaggctgctctactgcctgatggatgggggtaattgga
tagttacctcaaacatctctctgatcctactgtgagaactaggccttaac
tcctcccctggaatgggaacgacgcaacagaaggaagaggcctgtataca

gaattccatacatgttgattagagaaggaagtctacgtagatacagattc
aggagcagcaaaagataatttgctatcctgtgtcatcttagttagggttt
tactgctgtgaacagacaccatgaccaaggcaactctttttttttttttt
ttttttttttggtttttcgagacagggtttctctgtatagccctggctct
cctggtaccaaggcaactcttataaggacaacatttaattgggacgggac
tggcttgcaggttcagagattcagtccattatcatcaaagtgggagcatg
gcagaacccaggcaggcattgtgcaggaggagctgaaagttctacctctt
gttccaaaggcaaacaagacaagtctggctcccatgtggttaagagtggg
gtctcagagcccactcgcacagtgacacactttttctaacaagaccacac
ctcccaatagtaccactccctgggttaaacatttaaaccaccacatgtgt
atacctgatgaggtatgcagtctttattttcagagtagggctagaggtaa
acactggcagcatcaaagtcttagaaacgaatgtctagatttactcttga
tctataaaacccctccagatgtctgtgtacacattaagctttgggaagca
tgctcccaggacccatcgttggcactgtggcttgatcgaacgctagaact
aactagagagttggcgtgggagtggttgctggttttcatcactggcccct
gtgggcgtggcgtggactggacactggggctcattaagtcatattgtaca
gccataaagtttgagaaccaggagagaatgtgactccagtagatgtgaga
gataaatcctccagtgtgtactggggctcagaacaaaaccaaaagcaaca
acaaacctgagtacttccatgggactcctaaatggctctcaggtcagcac
ctgagcctttgctagatctgagcgtgtttgtagtatcattacatgtttct
aaagtgacatgatcgtatcagagtttctgtgatttcttctacactccatt
ttacatcagaggctacgcctagcccaggcacaccc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_69564396_69565640
seq2: B6Ng01-087B14.b_47_1296 (reverse)

seq1  TGTA-ACAGGCCTCTTC--TCT-TGGCCTGTCCATCATAT---GGGGGAG  43
      |||| ||||||||||||  ||| | ||  |||  ||  ||    ||||||
seq2  TGTATACAGGCCTCTTCCTTCTGTTGC--GTCGTTCCCATTCCAGGGGAG  48

seq1  GAGTT-AGAGCTAGTCTT--CAGTAGGATC--AGAGATGTTTTGAGTGAC  88
      ||||| ||  |||||  |  ||||||||||  ||||||||||   || ||
seq2  GAGTTAAGGCCTAGTTCTCACAGTAGGATCAGAGAGATGTTTGAGGTAAC  98

seq1  TATCCAATTTTACCCATTCAATCA-GCAGTAGAGGCAGGCTACTGATTAT  137
      |||||||||   |||| || |||| |||||||| |||| |||||||||||
seq2  TATCCAATTACCCCCA-TCCATCAGGCAGTAGA-GCAGCCTACTGATTAT  146

seq1  AAATGGCATTTTTTTTTAAGAGTGGGAAATAAACAAA-CCAAATGTTTAA  186
       |||||||||||||||  ||||||||||||||||||| ||||||||||||
seq2  -AATGGCATTTTTTTT--AGAGTGGGAAATAAACAAACCCAAATGTTTAA  193

seq1  TCACCCCTTCAAATAGTGTTTATGTGTTAGTCCAGGTTAGTGTGGGGCAA  236
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  TCACCCCTTCAAATAGTG-TTATGTGTTAGTCCAGGTTAGTGTGGGGCAA  242

seq1  ATCCTGGAAGAGTGTGGTCTCTGGTTGTCTGACTCAGAGCCTGAGGGTGG  286
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  ATCCTGGAAGAGTGTGGTCTCTGG-TGTCTGACTCAGAGCCTGAGGGTGG  291

seq1  TCCAGGGGTGGATGGTTTCTGGGCAGGTGTGGGGGCACAGTTGAAGGGTG  336
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGGGGTGGATGGTTTCTGGGCAGGTGTGGGGGCACAGTTGAAGGGTG  341

seq1  GTCCCAGGAGTTCTCAGCCAGCTGCTGGGGTGATAGGTGTGAGCAGTGTT  386
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCAGGAGTTCTCAGCCAGCTGCTGGGGTGATAGGTGTGAGCAGTGTT  391

seq1  CAGCTGCGTCCTGTGCACTCCTGACTTTTCTAGATAGGCTCTGACATTCG  436
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTGCGTCCTGTGCACTCCTGACTTTTCTAGATAGGCTCTGACATTCG  441

seq1  GAAACTTTAGTTTGGAAATAAAGGCCTGGAATAATTCATTAAGATTTAAG  486
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACTTTAGTTTGGAAATAAAGGCCTGGAATAATTCATTAAGATTTAAG  491

seq1  TGTATCTCCTGATTGTAAAACAGATCCCTTCTCTATAGAAGTTTAGGTCA  536
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATCTCCTGATTGTAAAACAGATCCCTTCTCTATAGAAGTTTAGGTCA  541

seq1  GTGTAGACATAAAAGGTTTTTTTTTTTAAAGATTTATTCATATGTGTTTA  586
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTAGACATAAAAGGTTTTTTTTTTTAAAGATTTATTCATATGTGTTTA  591

seq1  CCTGTATGCATGTATGTGCACCACATGTGTGCAGTGCCCTCAGAGGCCAG  636
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTATGCATGTATGTGCACCACATGTGTGCAGTGCCCTCAGAGGCCAG  641

seq1  AAGAGGGCACTGGAGCCCATTGAGAGATGGATAGGAGTTGCCATGTGGGT  686
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGGGCACTGGAGCCCATTGAGAGATGGATAGGAGTTGCCATGTGGGT  691

seq1  GCTGGGCACTGAAGAGAGTCCTCTGGAAGAGCAGCCAGTGCTCTTAACCT  736
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGGCACTGAAGAGAGTCCTCTGGAAGAGCAGCCAGTGCTCTTAACCT  741

seq1  CAGAGCCATCTCTTCCAGTTCAAAACAAAAGTGTTGTGAAGTGGTAGCCA  786
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGCCATCTCTTCCAGTTCAAAACAAAAGTGTTGTGAAGTGGTAGCCA  791

seq1  AAACCAACAGCCAGACGTTGGCATGTTCAGAACCGCTGACGCTCATCAAC  836
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCAACAGCCAGACGTTGGCATGTTCAGAACCGCTGACGCTCATCAAC  841

seq1  CGTGGTGTCCTTACCCAAGGAAGCACACCCTGCACATAGCTCATTGCGTG  886
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGGTGTCCTTACCCAAGGAAGCACACCCTGCACATAGCTCATTGCGTG  891

seq1  TGTTTGGGATAATGTACTGTGCAGCCTCAGACACAGTTTTCCATTTTTGA  936
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGGGATAATGTACTGTGCAGCCTCAGACACAGTTTTCCATTTTTGA  941

seq1  GACTTTAAAATGTCCCCTGGAGAAAGGTGGAGTGTCTTTCTCCTCTGTAG  986
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTTAAAATGTCCCCTGGAGAAAGGTGGAGTGTCTTTCTCCTCTGTAG  991

seq1  AAAAATAAATTTTGTTTAGGTTCTCACAGAAGCGTGCACTGACGACACGT  1036
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATAAATTTTGTTTAGGTTCTCACAGAAGCGTGCACTGACGACACGT  1041

seq1  CCGTCTCTTAGGGAAATGGGAGCCCAGCATTAGATCTGTCTGCACACAGC  1086
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTCTCTTAGGGAAATGGGAGCCCAGCATTAGATCTGTCTGCACACAGC  1091

seq1  TCTTAAAGAGAATGCCTTGAGTACTCTGCATGGAAAGTTCCATGTTTTAC  1136
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAAAGAGAATGCCTTGAGTACTCTGCATGGAAAGTTCCATGTTTTAC  1141

seq1  CTCTGTGAGGCACCATCTACAAGACATCCCAACGTTGGAGGAGGTCACGT  1186
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTGAGGCACCATCTACAAGACATCCCAACGTTGGAGGAGGTCACGT  1191

seq1  AGTCTTCTGTAATCCTCTTGTTATTCATTTGATAGGGATGGGGGCTAGTT  1236
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTTCTGTAATCCTCTTGTTATTCATTTGATAGGGATGGGGGCTAGTT  1241

seq1  AGAGAATTC  1245
      |||||||||
seq2  AGAGAATTC  1250

seq1: chr10_69483211_69484315
seq2: B6Ng01-087B14.g_66_1150

seq1  GAATTCCATACATGTTGATTAGAGAAGGAAGTCTACGTAGATACAGATTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATACATGTTGATTAGAGAAGGAAGTCTACGTAGATACAGATTC  50

seq1  AGGAGCAGCAAAAGATAATTTGCTATCCTGTGTCATCTTAGTTAGGGTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGCAGCAAAAGATAATTTGCTATCCTGTGTCATCTTAGTTAGGGTTT  100

seq1  TACTGCTGTGAACAGACACCATGACCAAGGCAACTCTTTTTTTTTTTTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGCTGTGAACAGACACCATGACCAAGGCAACTCTTTTTTTTTTTTTT  150

seq1  TTTTTTTTTTGGTTTTTCGAGACAGGGTTTCTCTGTATAGCCCTGGCTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTGGTTTTTCGAGACAGGGTTTCTCTGTATAGCCCTGGCTCT  200

seq1  CCTGGTACCAAGGCAACTCTTATAAGGACAACATTTAATTGGGACGGGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGTACCAAGGCAACTCTTATAAGGACAACATTTAATTGGGACGGGAC  250

seq1  TGGCTTGCAGGTTCAGAGATTCAGTCCATTATCATCAAAGTGGGAGCATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTTGCAGGTTCAGAGATTCAGTCCATTATCATCAAAGTGGGAGCATG  300

seq1  GCAGAACCCAGGCAGGCATTGTGCAGGAGGAGCTGAGAGTTCTACCTCTT  350
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  GCAGAACCCAGGCAGGCATTGTGCAGGAGGAGCTGAAAGTTCTACCTCTT  350

seq1  GTTCCAAAGGCAAACAAGACAAGTCTGGCTCCCATGTGGTTAAGAGTGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCAAAGGCAAACAAGACAAGTCTGGCTCCCATGTGGTTAAGAGTGGG  400

seq1  GTCTCAGAGCCCACTCGCACAGTGACACACTTTTTCTAACAAGACCACAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCAGAGCCCACTCGCACAGTGACACACTTTTTCTAACAAGACCACAC  450

seq1  CTCCCAATAGTACCACTCCCTGGGTTAAACATTTAAACCACCACATGTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCAATAGTACCACTCCCTGGGTTAAACATTTAAACCACCACATGTGT  500

seq1  ATACCTGATGAGGTATGCAGTCTTTATTTTCAGAGTAGGGCTAGAGGTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCTGATGAGGTATGCAGTCTTTATTTTCAGAGTAGGGCTAGAGGTAA  550

seq1  ACACTGGCAGCATCAAAGTCTTAGAAACGAATGTCTAGATTTACTCTTGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTGGCAGCATCAAAGTCTTAGAAACGAATGTCTAGATTTACTCTTGA  600

seq1  TCTATAAAACCCCTCCAGATGTCTGTGTACACATTAAGCTTTGGGAAGCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATAAAACCCCTCCAGATGTCTGTGTACACATTAAGCTTTGGGAAGCA  650

seq1  TGCTCCCAGGACCCATCGTTGGCACTGTGGCTTGATCGAACGCTAGAACT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCCCAGGACCCATCGTTGGCACTGTGGCTTGATCGAACGCTAGAACT  700

seq1  AACTAGAGAGTTGGCGTGGGAGTGGTTGCTGGTTTTCATCACTGGCCCCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAGAGAGTTGGCGTGGGAGTGGTTGCTGGTTTTCATCACTGGCCCCT  750

seq1  GTGGGCGTGGCGTGGACTGGACACTGGGGCTCATTAAGTCATATTGTACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGCGTGGCGTGGACTGGACACTGGGGCTCATTAAGTCATATTGTACA  800

seq1  GCCATAAAGTTTGAGAACCAGGAGAGAATGTGACTCCAGTAGATGTGAGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATAAAGTTTGAGAACCAGGAGAGAATGTGACTCCAGTAGATGTGAGA  850

seq1  GATAAATCCTCCAGTGTGTACT-GGGCTCAGAACAAAACAAAAAGCAAAC  899
      |||||||||||||||||||||| |||||||||||||||| ||||||||  
seq2  GATAAATCCTCCAGTGTGTACTGGGGCTCAGAACAAAACCAAAAGCAA--  898

seq1  AAACAAACCTGAGTACTTCCATGGGACTCTAAATTGGCTCTCAGGTCAGC  949
       ||||||||||||||||||||||||||||  || ||||||||||||||||
seq2  CAACAAACCTGAGTACTTCCATGGGACTCCTAAATGGCTCTCAGGTCAGC  948

seq1  ACCTGAGCCTTTGCTAGATCTGGAGCCGTGTTTTGTAAGTATCATTTAAC  999
      ||||||||||||||||||||| ||| |||| ||||| |||||||||  ||
seq2  ACCTGAGCCTTTGCTAGATCT-GAG-CGTG-TTTGT-AGTATCATT--AC  992

seq1  ATGTTTCTTAAAGTGACAATGAATCAGTATCAGAGTATCTGTGATATTCT  1049
      ||||||| ||||||||| ||| ||| |||||||||| |||||||| ||| 
seq2  ATGTTTC-TAAAGTGAC-ATG-ATC-GTATCAGAGTTTCTGTGAT-TTC-  1036

seq1  TTCTACACTCCCATTTTTTACATTCAGAAGGCTACGCCTAGCCCACAGGC  1099
      |||||||||||    ||||||| |||| |||||||||||||||  |||||
seq2  TTCTACACTCC---ATTTTACA-TCAG-AGGCTACGCCTAGCC--CAGGC  1079

seq1  ACACCC  1105
      ||||||
seq2  ACACCC  1085