BAC Information

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BAC

Clone NameB6Ng01-087K24
Chromosome10 (Build37)
Map Location 98,124,479 - 98,257,780
singlet/doubletdoublet
Overlap geneEG432494
Upstream geneEpyc, 4921510H08Rik, EG667438
Downstream geneAtp2b1, Wdr51b, Galnt4, Dusp6, LOC100042222, Gad1-ps, LOC100042232, LOC667502, Csl
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-087K24.bB6Ng01-087K24.g
ACCDH900742DH900743
length1,0951,118
definitionDH900742|Mus musculus domesticus DNA, BAC clone: B6Ng01-087K24, 5' end.DH900743|Mus musculus domesticus DNA, BAC clone: B6Ng01-087K24, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(98,124,479 - 98,125,584)(98,256,661 - 98,257,780)
sequence
gaattcaagccaaagagaaacctattcaacaggcctggaatacccaggct
gactttctacagtgattaaattgcccacataactctttaatctccctcct
aaatgctatcaaaacagaactgtatccctgttttatcagctataaaagag
agcttactcacttaaataagcaaaacttcattcttagtcctcagagcaag
cctgggagtgtggtccacacagcaggaaactgacatgtgagggcttttgg
ccatggaccatctctactgttagattctgccagaaaagctatatataaat
cctgaaattcacttttgggggagtgttgctgagctggggaagaaaaattg
aaaaataaatgaagagatcagtccacaaggttatacaatcatctacataa
cagcacagtgattcagagaagaccagagatcaagcctgactcttctgacc
tcattaattaaactctgaaagaccttgtgttaatttacattaacctccat
gtcttctgagctcatctttaaagtggaatacttttctctaccttgatcac
atacttctggaaaaagtcaaaatacaaatgtccgaaaattattctctttg
ctgttattaccgatgtattctgaaggtaaataattgatgtaggcaaaaag
agatgggtgtctacaaagcccctaacctttctgatgtgagatatatcagg
ctcttatgtactcagtcagactagaggttcatccattacataggacacaa
accatctgaggaatcctccaattttcagattcaaactttcttgtttcttt
tggatacccagtcaaggaatagggatttttgaaaaatacatgtcagaatc
gggtgatgggtagtgtatgcctttcctttaatcccagtgcttgggaagca
gagccaaacagatttgagggcagcctggttctacagagtgagttccagac
agccagggatacacagaaaaatcctttttgaaaaaacaaaacaaacagat
gatgatgatggataccatcgtatgtggtgggcagacaggatatagtacat
atagctatagatacaaatagtataatacatataggatgtgcaaaa
gaattcagttaggttctaagccaacatcccttgttctcagattctaacgt
gcagaaaggtaggtgttctttgcttcttcactaagaaatgggtggttctg
aattagagttcaggtgttgtcacaacctttctaaagcactgcttcctcac
atttcacagggatttagaggagtctgatgagaaccaaatgaaatgacgga
caccggacattaccttgatgttcaacacatggtaaatgtccagtgaatta
gaaccatggtgtgggaaactgctgactactgctggccaccacgcataagt
ttggacaaacaaccaatgtgtacatatgcagtaaagttttttgcaaagac
actgcctggcccgggcatgataatgaggctttgagagtataaccaatcag
atgtgagacatacaaatgaggtatgataatgaggctctgtgaggtacaga
gagagagagagagtagccaatcagatgaggaacatgcaaatgaggcatag
tgcataaccaatccgggtgtgagacacgcctctcctaggcctataaaagc
agcaccagttctgggctcggggtctcttcgcctctgcaattaagctctcc
caataaacatgtgcagaaggatcctgttgcagcgttgttcttcctggcca
gtcgagcgcgcgcaagaccatggttatgacctgaattgaagacatcggga
tgcagggcagatgttgccagttaactcagtcttctgaatgcccatcatat
aggagcaatgagatccatccatcaagacagatcagtacagctgaggaagt
aagaggagaaggcaaggggagaatgtctggtagacaggagatgaattctc
agctgtgactccccttatggactgtgtacttgcaacctcaactcaacgtg
aatcaaaatacatctattagtttcacattcctttcttgatcccttctttc
ttttctcaagataaggtctcagaggctcttatttacagtttctgtgtagc
catgggtgacgtgctctccgaaatagtttccactcctcaatttctggggt
gacagcagtgtgccaccactccaggaaagaatatcaaatttcctggagaa
acattgttcatgttcaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_98124479_98125584
seq2: B6Ng01-087K24.b_46_1140

seq1  GAATTCAAGCCAAAGAGAAACCTATTCAACAGGCCTGGAATACCCAGGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGCCAAAGAGAAACCTATTCAACAGGCCTGGAATACCCAGGCT  50

seq1  GACTTTCTACAGTGATTAAATTGCCCACATAACTCTTTAATCTCCCTCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTTCTACAGTGATTAAATTGCCCACATAACTCTTTAATCTCCCTCCT  100

seq1  AAATGCTATCAAAACAGAACTGTATCCCTGTTTTATCAGCTATAAAAGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGCTATCAAAACAGAACTGTATCCCTGTTTTATCAGCTATAAAAGAG  150

seq1  AGCTTACTCACTTAAATAAGCAAAACTTCATTCTTAGTCCTCAGAGCAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTACTCACTTAAATAAGCAAAACTTCATTCTTAGTCCTCAGAGCAAG  200

seq1  CCTGGGAGTGTGGTCCACACAGCAGGAAACTGACATGTGAGGGCTTTTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGGAGTGTGGTCCACACAGCAGGAAACTGACATGTGAGGGCTTTTGG  250

seq1  CCATGGACCATCTCTACTGTTAGATTCTGCCAGAAAAGCTATATATAAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGGACCATCTCTACTGTTAGATTCTGCCAGAAAAGCTATATATAAAT  300

seq1  CCTGAAATTCACTTTTGGGGGAGTGTTGCTGAGCTGGGGAAGAAAAATTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAAATTCACTTTTGGGGGAGTGTTGCTGAGCTGGGGAAGAAAAATTG  350

seq1  AAAAATAAATGAAGAGATCAGTCCACAAGGTTATACAATCATCTACATAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATAAATGAAGAGATCAGTCCACAAGGTTATACAATCATCTACATAA  400

seq1  CAGCACAGTGATTCAGAGAAGACCAGAGATCAAGCCTGACTCTTCTGACC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCACAGTGATTCAGAGAAGACCAGAGATCAAGCCTGACTCTTCTGACC  450

seq1  TCATTAATTAAACTCTGAAAGACCTTGTGTTAATTTACATTAACCTCCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTAATTAAACTCTGAAAGACCTTGTGTTAATTTACATTAACCTCCAT  500

seq1  GTCTTCTGAGCTCATCTTTAAAGTGGAATACTTTTCTCTACCTTGATCAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTCTGAGCTCATCTTTAAAGTGGAATACTTTTCTCTACCTTGATCAC  550

seq1  ATACTTCTGGAAAAAGTCAAAATACAAATGTCCGAAAATTATTCTCTTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTTCTGGAAAAAGTCAAAATACAAATGTCCGAAAATTATTCTCTTTG  600

seq1  CTGTTATTACCGATGTATTCTGAAGGTAAATAATTGATGTAGGCAAAAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTATTACCGATGTATTCTGAAGGTAAATAATTGATGTAGGCAAAAAG  650

seq1  AGATGGGTGTCTACAAAGCCCCTAACCTTTCTGATGTGAGATATATCAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGGGTGTCTACAAAGCCCCTAACCTTTCTGATGTGAGATATATCAGG  700

seq1  CTCTTATGTACTCAGTCAGACTAGAGGTTCATCCATTACATAGGACACAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTATGTACTCAGTCAGACTAGAGGTTCATCCATTACATAGGACACAA  750

seq1  ACCATCTGAGGAATCCTCCAATTTTCAGATTCAAACTTTCTTGTTTCTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATCTGAGGAATCCTCCAATTTTCAGATTCAAACTTTCTTGTTTCTTT  800

seq1  TGGATACCCAGTCAAGGAATAGGGATTTTTGAAAAATACATGTCAGAATC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATACCCAGTCAAGGAATAGGGATTTTTGAAAAATACATGTCAGAATC  850

seq1  GGGTGAT-GGTAGTGTATGCCTTTCCTTTAATCCCAGTGCTTGGGAAGCA  899
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGATGGGTAGTGTATGCCTTTCCTTTAATCCCAGTGCTTGGGAAGCA  900

seq1  GAGCCAAACAGATTTGAGGGCAGCCTGG-TCTACAGAGTGAGTTCCAGAA  948
      |||||||||||||||||||||||||||| ||||||||||||||||||| |
seq2  GAGCCAAACAGATTTGAGGGCAGCCTGGTTCTACAGAGTGAGTTCCAG-A  949

seq1  CAGCCAGGGATACACAGAAAAATCCTTTTTTGAAAAAAACAAAAACAAAC  998
      ||||||||||||||||||||||||| ||||||||||||   |||||||||
seq2  CAGCCAGGGATACACAGAAAAATCC-TTTTTGAAAAAA--CAAAACAAAC  996

seq1  AGATGGATGGATGGATGGATACCCATCCGTATGGTTGGTGGGCAGACA-G  1047
      |||| ||| ||| |||||||| |||| ||||||  ||||||||||||| |
seq2  AGAT-GAT-GAT-GATGGATA-CCAT-CGTATG--TGGTGGGCAGACAGG  1039

seq1  ATATAGGTACATATAGCTATAGATACAAATAGGTATAAATACATATA-GA  1096
      ||||| ||||||||||||||||||||||||| |||| |||||||||| ||
seq2  ATATA-GTACATATAGCTATAGATACAAATA-GTAT-AATACATATAGGA  1086

seq1  TGTGCCAAAA  1106
      ||||| ||| 
seq2  TGTGCAAAA-  1095

seq1: chr10_98256661_98257780
seq2: B6Ng01-087K24.g_69_1186 (reverse)

seq1  TCTGAACATGACAAAATTGTTCT-CAGGAAA-TTGATA-TCTGTCCTGGG  47
      ||||||||||| | |||  |||| ||||||| |||||| ||| |||| ||
seq2  TCTGAACATGA-ACAATGTTTCTCCAGGAAATTTGATATTCTTTCCT-GG  48

seq1  AGTGGTGGCACACTGCTGTCACCCCAGAAATTGAGAGGTGG-AACTAATT  96
      |||||||||||||||||||||||||||||||||||  |||| ||||| ||
seq2  AGTGGTGGCACACTGCTGTCACCCCAGAAATTGAGGAGTGGAAACTATTT  98

seq1  CGGGAGAGCAAGGTCACCCATGGCTACACAGAAACTGTAAAT-AGAGCCT  145
      | ||||||| | |||||||||||||||||||||||||||||| |||||||
seq2  C-GGAGAGC-ACGTCACCCATGGCTACACAGAAACTGTAAATAAGAGCCT  146

seq1  CTTGAGACCTTATCTTGAGAAAAAGAAAGAAGGGATCAAAGAAAGGAATG  195
      | ||||||||||||||||| ||||||||||||||||| ||||||||||||
seq2  C-TGAGACCTTATCTTGAG-AAAAGAAAGAAGGGATC-AAGAAAGGAATG  193

seq1  TGAAACTAATAGATGTATTTTGATTCACGTTGAGTTGAGGTTGCAAGTAC  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAACTAATAGATGTATTTTGATTCACGTTGAGTTGAGGTTGCAAGTAC  243

seq1  ACAGTCCATAAGGGGAGTCACAGCTGAGAATTCATCTCCTGTCTACCAGA  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTCCATAAGGGGAGTCACAGCTGAGAATTCATCTCCTGTCTACCAGA  293

seq1  CATTCTCCCCTTGCCTTCTCCTCTTACTTCCTCAGCTGTACTGATCTGTC  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTCCCCTTGCCTTCTCCTCTTACTTCCTCAGCTGTACTGATCTGTC  343

seq1  TTGATGGATGGATCTCATTGCTCCTATATGATGGGCATTCAGAAGACTGA  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATGGATGGATCTCATTGCTCCTATATGATGGGCATTCAGAAGACTGA  393

seq1  GTTAACTGGCAACATCTGCCCTGCATCCCGATGTCTTCAATTCAGGTCAT  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAACTGGCAACATCTGCCCTGCATCCCGATGTCTTCAATTCAGGTCAT  443

seq1  AACCATGGTCTTGCGCGCGCTCGACTGGCCAGGAAGAACAACGCTGCAAC  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCATGGTCTTGCGCGCGCTCGACTGGCCAGGAAGAACAACGCTGCAAC  493

seq1  AGGATCCTTCTGCACATGTTTATTGGGAGAGCTTAATTGCAGAGGCGAAG  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATCCTTCTGCACATGTTTATTGGGAGAGCTTAATTGCAGAGGCGAAG  543

seq1  AGACCCCGAGCCCAGAACTGGTGCTGCTTTTATAGGCCTAGGAGAGGCGT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCCCGAGCCCAGAACTGGTGCTGCTTTTATAGGCCTAGGAGAGGCGT  593

seq1  GTCTCACACCCGGATTGGTTATGCACTATGCCTCATTTGCATGTTCCTCA  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCACACCCGGATTGGTTATGCACTATGCCTCATTTGCATGTTCCTCA  643

seq1  TCTGATTGGCTACTCTCTCTCTCTCTCTGTACCTCACAGAGCCTCATTAT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGATTGGCTACTCTCTCTCTCTCTCTGTACCTCACAGAGCCTCATTAT  693

seq1  CATACCTCATTTGTATGTCTCACATCTGATTGGTTATACTCTCAAAGCCT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACCTCATTTGTATGTCTCACATCTGATTGGTTATACTCTCAAAGCCT  743

seq1  CATTATCATGCCCGGGCCAGGCAGTGTCTTTGCAAAAAACTTTACTGCAT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTATCATGCCCGGGCCAGGCAGTGTCTTTGCAAAAAACTTTACTGCAT  793

seq1  ATGTACACATTGGTTGTTTGTCCAAACTTATGCGTGGTGGCCAGCAGTAG  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTACACATTGGTTGTTTGTCCAAACTTATGCGTGGTGGCCAGCAGTAG  843

seq1  TCAGCAGTTTCCCACACCATGGTTCTAATTCACTGGACATTTACCATGTG  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCAGTTTCCCACACCATGGTTCTAATTCACTGGACATTTACCATGTG  893

seq1  TTGAACATCAAGGTAATGTCCGGTGTCCGTCATTTCATTTGGTTCTCATC  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAACATCAAGGTAATGTCCGGTGTCCGTCATTTCATTTGGTTCTCATC  943

seq1  AGACTCCTCTAAATCCCTGTGAAATGTGAGGAAGCAGTGCTTTAGAAAGG  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTCCTCTAAATCCCTGTGAAATGTGAGGAAGCAGTGCTTTAGAAAGG  993

seq1  TTGTGACAACACCTGAACTCTAATTCAGAACCACCCATTTCTTAGTGAAG  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGACAACACCTGAACTCTAATTCAGAACCACCCATTTCTTAGTGAAG  1043

seq1  AAGCAAAGAACACCTACCTTTCTGCACGTTAGAATCTGAGAACAAGGGAT  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAAAGAACACCTACCTTTCTGCACGTTAGAATCTGAGAACAAGGGAT  1093

seq1  GTTGGCTTAGAACCTAACTGAATTC  1120
      |||||||||||||||||||||||||
seq2  GTTGGCTTAGAACCTAACTGAATTC  1118