BAC Information

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BAC

Clone NameB6Ng01-089A02
Chromosome10 (Build37)
Map Location 12,036,296 - 12,205,660
singlet/doubletdoublet
Overlap geneUtrn
Upstream geneEpm2a, EG666732, LOC100039343
Downstream geneLOC665172, Stx11, Sf3b5, Plagl1, 4930519B02Rik, Ltv1, LOC666829, Phactr2, LOC100039475
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-089A02.bB6Ng01-089A02.g
ACCDH901703DH901704
length1,023184
definitionDH901703|Mus musculus domesticus DNA, BAC clone: B6Ng01-089A02, 5' end.DH901704|Mus musculus domesticus DNA, BAC clone: B6Ng01-089A02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(12,036,296 - 12,037,310)(12,205,477 - 12,205,660)
sequence
gaattctttcagtcatgtcattgaatgtggtaaaaccagctgctgtgttg
tgacctacctctttatggtggcttatagccatccactatcaaatgaagcc
ccatgtcttgaacacaaagacctcatttccatgttctgcgtttgccatgg
ttcccacggactcctgggaggccaaaggcaaagttctgccttccaatacg
atttagctaggcaagctgtgtttggtatgcttgtttcgattttcacagtg
aacagtaagctcttacctacttcttggaagcttttagggctctcaagaac
agtcttttgcattacatagttcaagtgtatttgacactggactaatgttc
atcaacagaagctagtacaaaggtgccagataactcctggagaagcagtg
agagttactcgggcctagaaatgttcagccaggacaaatgcaaggatgtg
cctttatgctgtcagacaagagtgatggtcacctctttttgcagataact
cataacaacacataacaaaagtttcacccacccctctgctcctctgaact
ttgtcccagcccactctagtgccaccatgaatgctgcttaatttttgtgt
gctcttacaatgtggtcttccttcctgctccagtgtctgctttgccgcct
aattctccagcttttataaatgaataaatcaagtataatttattgtggtt
tcaatatccatttgcaaggcctttccaggcattctatgcttttacctttc
aagcagtctctcaacctgttctgagccatttcagtttataatagacttgt
aattatgacaaacttttcagtaggcttctgattctccctttatctgtaaa
gttcacattctaagatcctcagtgaatgtctgaaactgtaaatatttacc
aacccctatatacactatgttccctccacccatacaggcatactttggat
aaagtcaagaattttgagaacttctttttgggaattcaatgattgagatg
atgatgatgggtggtgggtggtg
tcatctataatttctatcttattgtctaagtaagtgaaaaataaatttgg
ttataaattccatttgtaatcaggagttgcccgaggttaaggatattagt
tctatggtgtaaagcagctttgcttactcattctacattttcaggatgtg
tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_12036296_12037310
seq2: B6Ng01-089A02.b_43_1065

seq1  GAATTCTTTCAGTCATGTCATTGAATGTGGTAAAACCAGCTGCTGTGTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCAGTCATGTCATTGAATGTGGTAAAACCAGCTGCTGTGTTG  50

seq1  TGACCTACCTCTTTATGGTGGCTTATAGCCATCCACTATCAAATGAAGCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCTACCTCTTTATGGTGGCTTATAGCCATCCACTATCAAATGAAGCC  100

seq1  CCATGTCTTGAACACAAAGACCTCATTTCCATGTTCTGCGTTTGCCATGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGTCTTGAACACAAAGACCTCATTTCCATGTTCTGCGTTTGCCATGG  150

seq1  TTCCCACGGACTCCTGGGAGGCCAAAGGCAAAGTTCTGCCTTCCAATACG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCACGGACTCCTGGGAGGCCAAAGGCAAAGTTCTGCCTTCCAATACG  200

seq1  ATTTAGCTAGGCAAGCTGTGTTTGGTATGCTTGTTTCGATTTTCACAGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAGCTAGGCAAGCTGTGTTTGGTATGCTTGTTTCGATTTTCACAGTG  250

seq1  AACAGTAAGCTCTTACCTACTTCTTGGAAGCTTTTAGGGCTCTCAAGAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGTAAGCTCTTACCTACTTCTTGGAAGCTTTTAGGGCTCTCAAGAAC  300

seq1  AGTCTTTTGCATTACATAGTTCAAGTGTATTTGACACTGGACTAATGTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTTTTGCATTACATAGTTCAAGTGTATTTGACACTGGACTAATGTTC  350

seq1  ATCAACAGAAGCTAGTACAAAGGTGCCAGATAACTCCTGGAGAAGCAGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAACAGAAGCTAGTACAAAGGTGCCAGATAACTCCTGGAGAAGCAGTG  400

seq1  AGAGTTACTCGGGCCTAGAAATGTTCAGCCAGGACAAATGCAAGGATGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTTACTCGGGCCTAGAAATGTTCAGCCAGGACAAATGCAAGGATGTG  450

seq1  CCTTTATGCTGTCAGACAAGAGTGATGGTCACCTCTTTTTGCAGATAACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTATGCTGTCAGACAAGAGTGATGGTCACCTCTTTTTGCAGATAACT  500

seq1  CATAACAACACATAACAAAAGTTTCACCCACCCCTCTGCTCCTCTGAACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAACAACACATAACAAAAGTTTCACCCACCCCTCTGCTCCTCTGAACT  550

seq1  TTGTCCCAGCCCACTCTAGTGCCACCATGAATGCTGCTTAATTTTTGTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCCCAGCCCACTCTAGTGCCACCATGAATGCTGCTTAATTTTTGTGT  600

seq1  GCTCTTACAATGTGGTCTTCCTTCCTGCTCCAGTGTCTGCTTTGCCGCCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTTACAATGTGGTCTTCCTTCCTGCTCCAGTGTCTGCTTTGCCGCCT  650

seq1  AATTCTCCAGCTTTTATAAATGAATAAATCAAGTATAATTTATTGTGGTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTCCAGCTTTTATAAATGAATAAATCAAGTATAATTTATTGTGGTT  700

seq1  TCAATATCCATTTGCAAGGCC-TTCCAGGCATTCTATGCTTTTACC-TTC  748
      ||||||||||||||||||||| |||||||||||||||||||||||| |||
seq2  TCAATATCCATTTGCAAGGCCTTTCCAGGCATTCTATGCTTTTACCTTTC  750

seq1  AAGCAGTCTCTCAACCTGTTCTGAGCCA-TTCAGTTTATAATAGACTTGT  797
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  AAGCAGTCTCTCAACCTGTTCTGAGCCATTTCAGTTTATAATAGACTTGT  800

seq1  AATTATGACAAAC-TTTCAGTAGGCTTCTGATTCTCCC-TTATCTGTAAA  845
      ||||||||||||| |||||||||||||||||||||||| |||||||||||
seq2  AATTATGACAAACTTTTCAGTAGGCTTCTGATTCTCCCTTTATCTGTAAA  850

seq1  GTTCACATTCTAAGATCCTCAGTGAATGTCTGAAACTGTAAATA-TTACC  894
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  GTTCACATTCTAAGATCCTCAGTGAATGTCTGAAACTGTAAATATTTACC  900

seq1  AACCCCTATATACACTATGTTCCCTCCACCCATACAGGCATACTTTGGAT  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCCTATATACACTATGTTCCCTCCACCCATACAGGCATACTTTGGAT  950

seq1  AAAGTCAAGAATTTTGAGAACTTC-TATTGGGAACTCAATGATTGAGGAT  993
      |||||||||||||||||||||||| | ||||||| ||||||||||| |||
seq2  AAAGTCAAGAATTTTGAGAACTTCTTTTTGGGAATTCAATGATTGA-GAT  999

seq1  GATGATGAT-GGTGGT-GGTGGTG  1015
      ||||||||| |||||| |||||||
seq2  GATGATGATGGGTGGTGGGTGGTG  1023

seq1: chr10_12205477_12205660
seq2: B6Ng01-089A02.g_73_256 (reverse)

seq1  CACACACACACACACACACACACACACACACACACACATCCTGAAAATGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACACACACACACATCCTGAAAATGT  50

seq1  AGAATGAGTAAGCAAAGCTGCTTTACACCATAGAACTAATATCCTTAACC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATGAGTAAGCAAAGCTGCTTTACACCATAGAACTAATATCCTTAACC  100

seq1  TCGGGCAACTCCTGATTACAAATGGAATTTATAACCAAATTTATTTTTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGGCAACTCCTGATTACAAATGGAATTTATAACCAAATTTATTTTTCA  150

seq1  CTTACTTAGACAATAAGATAGAAATTATAGATGA  184
      ||||||||||||||||||||||||||||||||||
seq2  CTTACTTAGACAATAAGATAGAAATTATAGATGA  184