BAC Information

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BAC

Clone NameB6Ng01-089G04
Chromosome10 (Build37)
Map Location 26,701,719 - 26,806,924
singlet/doubletdoublet
Overlap geneLama2
Upstream geneC030003D03Rik, LOC100040851, LOC15352, Samd3, L3mbtl3, LOC435208, LOC667572, LOC100040349, Arhgap18
Downstream geneLOC100040385, LOC100040961, LOC100040401, Ptprk
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-089G04.bB6Ng01-089G04.g
ACCDH901978DH901979
length1,171912
definitionDH901978|Mus musculus domesticus DNA, BAC clone: B6Ng01-089G04, 5' end.DH901979|Mus musculus domesticus DNA, BAC clone: B6Ng01-089G04, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(26,701,719 - 26,702,893)(26,806,007 - 26,806,924)
sequence
gaattcttaacttcttaacttcttaagagttacgttataaagtatggaaa
cttcaatttgatttggtagaaacagatttaaagttatacacaattatagc
caagcctgatggtgcattcctatagcaccagcacacaggttgaaaaggaa
aacccaagttctagggtagcctgggctatacagtaaaagcctgcttcaga
aaaataataaataaggaaataagttgtggtggtttgaatattcttggctc
atgggaagtggcactattaggaggtgtgaccttgtttaaataagtgtgtc
attttgtaggtgggctttgaggtttactagggctcaagctctgcccagtg
aggaaggaacttcctcctggctggctgcagaagacagtctccttcctcct
ggctgccttctgatcaaaatgtagagctcttccttatagcatcgtttctg
cttggatgttgtcatgcttcccacgatgatgataatggactgaatctctg
aactggtaagccacccacaatgaagtgttttccattagaagagatgcctt
ggtcatggagtctcctcacagcaatgaaaaccctaactaagatacaaata
aacaacaagaaccctcctaataaatcttatacagttgtgtttaatgatgc
aaagaaattaataaaatacttctaatattaaattaggacatgggatgttc
taacaccacagtaataaaaccccaaaatgttctgttggttggaagcttat
ggaattcttttttaattaacaaggcttacttgttgcaacacaattcacga
atgaaactgtgtgaagagaattctgagtgctaggaagaacactctatgaa
aacaagaagagtcttgtgtccttgttttttttcaattgttcttggcgtgt
atctgagctcctcccaggtgcagaggatagaggtgagctgatttcagaat
actccttgttgcctgctgctgtttgttatgcagttaaatggttgagctgg
cctttgtatggaaaagtactctgcctgtgtggttgcttatcccttgggtg
gaataccttactcatgtggattttttttcttgaccgtcaagattaaatag
cttgaatccttgataaactgacgatggaattatggttaccctgcctcatt
tcagaccctgctttccatgtt
gaattctgttaatttcttccttttctatacagaagatttgtagcttcatt
tactctccattgtctgtcttttttttttttttttgacaattgtgtttttt
ctgacatatcttaaaaagagaaacacgtgaccatgtgtgtggcattctcc
ctttgtttcctgtagttgttttataactcatccatctctgtttaaattta
taatctccaattagttcattctctgttagtgaaatgaaatagccaaggct
aaggaatatataaagaaatgagttgtatttggttcacaactttggaggcc
gaaattcgagctttagatggtaacattagtacagtgttctaaagcgcagt
gaacaatggcatctcagggagagccagcgtaagagaatgagatcatgtga
taaagacaaagaaagtgaaggaccgaggaaggttattctcttacatcaat
cagcctcttgtgagaacatgctgaaacccccaaaaaaaaaaggcgctctt
tctgaagaacaactttgtaaaaggggcaagctttattttcttacatttta
ctggttatttgttaacaatttcaaacatgcatatcatgtcatgaggtcct
catccccctactggtcggacttaatcttaatactgctatatagaaacagc
cttcccagggtctgagtccctgccaggcacaaccatataagagcctttgt
gaatctactctgcattgacttttctgcatgtggggggaggggaggactcc
tcattgttgcatatggatatctagttaatcacagttattcctgcagaaat
ttgtatggacctcatttctgagacctacatacctctattgatgatgttaa
tttcacctctgggaatctgctaccttgactacatgcttgaatatttgagt
caagaatggatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_26701719_26702893
seq2: B6Ng01-089G04.b_46_1216

seq1  GAATTCTTAACTTCTTAACTTCTTAAGAGTTACGTTATAAAGTATGGAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTAACTTCTTAACTTCTTAAGAGTTACGTTATAAAGTATGGAAA  50

seq1  CTTCAATTTGATTTGGTAGAAACAGATTTAAAGTTATACACAATTATAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAATTTGATTTGGTAGAAACAGATTTAAAGTTATACACAATTATAGC  100

seq1  CAAGCCTGATGGTGCATTCCTATAGCACCAGCACACAGGTTGAAAAGGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCCTGATGGTGCATTCCTATAGCACCAGCACACAGGTTGAAAAGGAA  150

seq1  AACCCAAGTTCTAGGGTAGCCTGGGCTATACAGTAAAAGCCTGCTTCAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCAAGTTCTAGGGTAGCCTGGGCTATACAGTAAAAGCCTGCTTCAGA  200

seq1  AAAATAATAAATAAGGAAATAAGTTGTGGTGGTTTGAATATTCTTGGCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAATAAATAAGGAAATAAGTTGTGGTGGTTTGAATATTCTTGGCTC  250

seq1  ATGGGAAGTGGCACTATTAGGAGGTGTGACCTTGTTTAAATAAGTGTGTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGAAGTGGCACTATTAGGAGGTGTGACCTTGTTTAAATAAGTGTGTC  300

seq1  ATTTTGTAGGTGGGCTTTGAGGTTTACTAGGGCTCAAGCTCTGCCCAGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGTAGGTGGGCTTTGAGGTTTACTAGGGCTCAAGCTCTGCCCAGTG  350

seq1  AGGAAGGAACTTCCTCCTGGCTGGCTGCAGAAGACAGTCTCCTTCCTCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGGAACTTCCTCCTGGCTGGCTGCAGAAGACAGTCTCCTTCCTCCT  400

seq1  GGCTGCCTTCTGATCAAAATGTAGAGCTCTTCCTTATAGCATCGTTTCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGCCTTCTGATCAAAATGTAGAGCTCTTCCTTATAGCATCGTTTCTG  450

seq1  CTTGGATGTTGTCATGCTTCCCACGATGATGATAATGGACTGAATCTCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGATGTTGTCATGCTTCCCACGATGATGATAATGGACTGAATCTCTG  500

seq1  AACTGGTAAGCCACCCACAATGAAGTGTTTTCCATTAGAAGAGATGCCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGGTAAGCCACCCACAATGAAGTGTTTTCCATTAGAAGAGATGCCTT  550

seq1  GGTCATGGAGTCTCCTCACAGCAATGAAAACCCTAACTAAGATACAAATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCATGGAGTCTCCTCACAGCAATGAAAACCCTAACTAAGATACAAATA  600

seq1  AACAACAAGAACCCTCCTAATAAATCTTATACAGTTGTGTTTAATGATGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAACAAGAACCCTCCTAATAAATCTTATACAGTTGTGTTTAATGATGC  650

seq1  AAAGAAATTAATAAAATACTTCTAATATTAAATTAGGACATGGGATGTTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAATTAATAAAATACTTCTAATATTAAATTAGGACATGGGATGTTC  700

seq1  TAACACCACAGTAATAAAACCCCAAAATGTTCTGTTGGTTGGAAGCTTAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACACCACAGTAATAAAACCCCAAAATGTTCTGTTGGTTGGAAGCTTAT  750

seq1  GGAATTCTTTTTTAATTAACAAGGCTTACTTGTTGCAACACAATTCAGGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  GGAATTCTTTTTTAATTAACAAGGCTTACTTGTTGCAACACAATTCACGA  800

seq1  ATGAAACTGTGTGAAGAGAATTCTGAGTGCTAGGAAGAACACTCTATGAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAACTGTGTGAAGAGAATTCTGAGTGCTAGGAAGAACACTCTATGAA  850

seq1  AACAAGAAGAGTCTTGTGTCCTTGTTTTTTTTTCAATTGTTCTTGGCGTG  900
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  AACAAGAAGAGTCTTGTGTCCTTG-TTTTTTTTCAATTGTTCTTGGCGTG  899

seq1  TATCTGAGCTCCTCCCAGGTGCAGAGGATAGAGGTGAGCTGATTTCAGAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTGAGCTCCTCCCAGGTGCAGAGGATAGAGGTGAGCTGATTTCAGAA  949

seq1  TACTCCTTGTTGCCTGCTGCTGTTTGTTATGCAGTTAAATGGTTGAGCTG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCCTTGTTGCCTGCTGCTGTTTGTTATGCAGTTAAATGGTTGAGCTG  999

seq1  GCCTTTGTATGGAAAAGTACTTCTGCCTGTGT-GTTGCTTATCCCTGTGG  1049
      |||||||||||||||||||| ||||||||||| |||||||||||||  ||
seq2  GCCTTTGTATGGAAAAGTAC-TCTGCCTGTGTGGTTGCTTATCCCTTGGG  1048

seq1  TTGAATACCTTACTCATGTG--ATTTTTTTCTTGACCGTCAGAGTATAAA  1097
      | ||||||||||||||||||   |||||||||||||||||| ||  ||||
seq2  TGGAATACCTTACTCATGTGGATTTTTTTTCTTGACCGTCA-AGATTAAA  1097

seq1  TTGCTTGATTCTTTGAATAAAACTGACGATTGAATTATTGTTTACTCTGC  1147
      | |||||| || ||||   ||||||||||| |||||| || |||| ||||
seq2  TAGCTTGAATCCTTGA--TAAACTGACGATGGAATTA-TGGTTACCCTGC  1144

seq1  CTCATTTTCAG-CCCTGCTTTCCCATGTT  1175
      |||| |||||| ||||||||| |||||||
seq2  CTCA-TTTCAGACCCTGCTTT-CCATGTT  1171

seq1: chr10_26806007_26806924
seq2: B6Ng01-089G04.g_68_979 (reverse)

seq1  CATCACATTCCTTGACTTCAAAATATATTCAAAGCAATAGTAGTCAAAGT  50
      |||| |||| |||||| ||||   |||||| |||||   |||||||| ||
seq2  CATC-CATT-CTTGAC-TCAA---ATATTC-AAGCA--TGTAGTCAAGGT  41

seq1  AGCAAGATCCCAGAGTGAAAATTTAAACATACATCAATAGAGTATTGTA-  99
      ||||   ||||||||   |||||  ||||| |||||||||||   |||| 
seq2  AGCAGATTCCCAGAGGTGAAATT--AACAT-CATCAATAGAGGTATGTAG  88

seq1  GTCTCAGAAATGA-GTCCATACAAATATCTGCAAGAATAAACTTGTGA-T  147
      ||||||||||||| |||||||||||| |||||| ||||||   ||||| |
seq2  GTCTCAGAAATGAGGTCCATACAAATTTCTGCAGGAATAA--CTGTGATT  136

seq1  AACTAGATATCCATATGCAAACAATGA-GAGTAGGCCCTACCTTACCC--  194
      |||||||||||||||||| |||||||| ||||    ||| || | |||  
seq2  AACTAGATATCCATATGC-AACAATGAGGAGT----CCTCCCCTCCCCCC  181

seq1  -CATGCAGAAAAGTCAATGCAGAGTAGATTCACAAAGGCTCTTATATGG-  242
       |||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  ACATGCAGAAAAGTCAATGCAGAGTAGATTCACAAAGGCTCTTATATGGT  231

seq1  TGTGCCTGGCAGGGACTCAGA-CCTGGGAAGGCTG-TTCTATATAGCAGT  290
      ||||||||||||||||||||| ||||||||||||| ||||||||||||||
seq2  TGTGCCTGGCAGGGACTCAGACCCTGGGAAGGCTGTTTCTATATAGCAGT  281

seq1  ATTAAGATTAAGTCCGACCAGTA-GGAGATGAGGACCTCATG-CATGATA  338
      ||||||||||||||||||||||| || ||||||||||||||| |||||||
seq2  ATTAAGATTAAGTCCGACCAGTAGGGGGATGAGGACCTCATGACATGATA  331

seq1  TGCATGTTTGAAATTGTTAACAAATTAACAGTAAAATGTAAGAAGAAATA  388
      ||||||||||||||||||||||||| | |||||||||||||||| | | |
seq2  TGCATGTTTGAAATTGTTAACAAATAACCAGTAAAATGTAAGAAAATAAA  381

seq1  GAATTGACCAGTTATCAAAATGCTGCTTCAGAAAGAGCTGGC--ATTTTA  436
      |  ||| ||  ||  |||| |  | ||||||||||||| | |   |||| 
seq2  G-CTTGCCCCTTTTACAAAGTTGTTCTTCAGAAAGAGC-GCCTTTTTTTT  429

seq1  TTGTGGGATTCAGCAAGTTCTCACAAGAGGCTGATTGATGTAAGAGAATA  486
      ||| ||| ||||||| ||||||||||||||||||||||||||||||||||
seq2  TTGGGGGTTTCAGCATGTTCTCACAAGAGGCTGATTGATGTAAGAGAATA  479

seq1  AACCTCCTCCGTCC-TCACTTTCTTTGTCTTTATCACATGATCTCATTCT  535
      | | ||||| |||| |||||||||||||||||||||||||||||||||||
seq2  ACCTTCCTCGGTCCTTCACTTTCTTTGTCTTTATCACATGATCTCATTCT  529

seq1  CTTACGCTTGCTCTCCCTGAGATGCCATTGTTCACTGCGCTTTAGAACAC  585
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  CTTACGCTGGCTCTCCCTGAGATGCCATTGTTCACTGCGCTTTAGAACAC  579

seq1  TGTACTAATGTTACCATCTAAAGCTCGAATTTCGGCCTCCAAAGTTGTGA  635
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACTAATGTTACCATCTAAAGCTCGAATTTCGGCCTCCAAAGTTGTGA  629

seq1  ACCAAATACAACTCATTTCTTTATATATTCCTTAGCCTTGGCTATTTCAT  685
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAATACAACTCATTTCTTTATATATTCCTTAGCCTTGGCTATTTCAT  679

seq1  TTCACTAACAGAGAATGAACTAATTGGAGATTATAAATTTAAACAGAGAT  735
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACTAACAGAGAATGAACTAATTGGAGATTATAAATTTAAACAGAGAT  729

seq1  GGATGAGTTATAAAACAACTACAGGAAACAAAGGGAGAATGCCACACACA  785
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGAGTTATAAAACAACTACAGGAAACAAAGGGAGAATGCCACACACA  779

seq1  TGGTCACGTGTTTCTCTTTTTAAGATATGTCAGAAAAAACACAATTGTCA  835
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCACGTGTTTCTCTTTTTAAGATATGTCAGAAAAAACACAATTGTCA  829

seq1  AAAAAAAAAAAAAAAGACAGACAATGGAGAGTAAATGAAGCTACAAATCT  885
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAAAAAAAGACAGACAATGGAGAGTAAATGAAGCTACAAATCT  879

seq1  TCTGTATAGAAAAGGAAGAAATTAACAGAATTC  918
      |||||||||||||||||||||||||||||||||
seq2  TCTGTATAGAAAAGGAAGAAATTAACAGAATTC  912