BAC Information

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BAC

Clone NameB6Ng01-090I12
Chromosome10 (Build37)
Map Location 28,986,354 - 28,987,461
singlet/doubletsinglet
Overlap genenone
Upstream genePtprk, E430004N04Rik, 4930519F09Rik, 2310057J18Rik, LOC432447, 6330407J23Rik
Downstream geneEchdc1, Rnf146, Rspo3, EG630389, Rpl12, LOC623064, LOC674389, Gm232, LOC667696, LOC100040542, 2610036L11Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-090I12.bB6Ng01-090I12.g
ACCDH902803DH902804
length1,1561,261
definitionDH902803|Mus musculus domesticus DNA, BAC clone: B6Ng01-090I12, 5' end.DH902804|Mus musculus domesticus DNA, BAC clone: B6Ng01-090I12, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatcccatatgcagcctccaaaaccagacacgagtgctgatgcca
agaagtgctttctgacaggagcctgttataactgtctcctgagatgctct
gccagaaccttaccaatacagaaacggatgcttgcagtcaaccattgaac
tgagtatagggaccccaatggaggagttaggagtaggagtgaaggagcta
aagggctttgtaactccataagaagaacacaatatcaaccaagactcccc
agagctcccagggactaaatcaccaaccaaagacatggagggacccatgc
tttcatatgtagctgcatatgtagcagaggatgcccttatttggcattaa
tgtgaggggaagcccttggtcctgtgaaggctcaatgctgcagcataggg
gaattctatggcagtgaggcagaagtggttggatgggttggggagtgccc
tcatagaagcaggtggaagaaagaatgacatagcgagtttgcagaggaga
atggaatgagggataacatttgaagtaaataaataaaataaccagtaatt
ttttaattaactaaaatttattaggaaaatcagatttatattttaatagt
cttatattgagcatatatagaaatattaaagtgtcataatgtcatatttt
taaaaagggtattttcgtggattgcataacaaacttatttcaaagcatta
aatatgtaagaaaagaaaaactatcaattgttcacagaatggtacagaag
ttctcagtgaaattgtactgttgatattaatgtttctataataatcaagc
acaattataaatttggaaaatgggatggcaacccctcccctcactttatg
ccctgtctttctgctggaggtaggctctatgagttccctctccccaatgt
agggcatttaatccacgttccctccctttgagtcctgaaagtctctcacc
tcccagttctctgatacacccttggagggtatgctcaacctcttacctcc
agaggtggcctacagagcttcagtccccttttcctcccaggtcctcccaa
aattgttcctgactgaaagaatttacagggatattgaatggaagaggagc
cctgaggaaaagagggtccgcaacagtccaagtgggattcagcttaatgg
aggcct
gaattcctgatctttccaaggaatgggtattggattttgtcaaatgcttt
ctctgcatctaacgagatgatcatgtggttttgtctttgagtttgtttgg
attacgttgatggatttccgtatattgaataatcctgcatccctgggatg
aaacctacttggtcaggatggatgattgttttgatgtgttcttggattca
gttagcgagaactttattgaggatttttgcattgatattcataaagaaaa
ttggtctgaagttctctatctttgttgggtctttttgtggtttaggtatc
agagtaattgtggcttcatagaatgagttgagtagagtaccttctgttta
aattttggggaacagtttgtgaagaattggaattagatcttctttgaagg
tctgatagaactctgcactaaacccatctggtcctgggctttttttggtt
ggcagactattaatgactgcttccatttctttaggagatataggaatgtt
tagatcattaacctgatttgatttaactttggtacctggtatctgtctag
aaacttgtccgtttcatcccagttctccagttttgttgagtatagccttt
tgtagaaggatctgatggtgttttggatttcttcaggatctgttgttatg
tctcccttttcatttctgatttttgttaattaggatgctttccctgtccc
tctagtgagtctggctaagggtttgtctatcttgttgatttttctcaaag
aaccagctcctcctttggttgattctttgaatagttcttcttgtttccac
ttggttgatttcacccctgagttgattatttcctggtgtctactcctctt
gggtgatttgcttccttttgttctagagcttttagtgtgttgtcaagctg
ctaatgtgtgctctgtctagtttcttttggagcactcagagctaatgagt
tttcctctaagaaatgctttcattgtgtcccataagtttgggtatatttg
gcttcattttcattaacctctaaaagttcttaattctttctttattcttt
cctgactcaggatcaatgagaagatgttgtcagttccacatgaatgtgcc
ttctattatttatttgctattgagaacacccttatcctgggtactgaagg
atactaaggcacttcaatttctgattcgctgagggtttgaccaaattgga
ttggaaagacgattccttacagcagcaggtatcggaagaagtgcaatcct
ctcgtctgata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_28986354_28987461
seq2: B6Ng01-090I12.b_95_1202 (reverse)

seq1  AGGCCTCCCCTTAAGCTGGATCCCACTTTGGGCCTGTTGCTGAACCTTCT  50
      |||||| || |||||||| |||||||||  || ||||||| | ||| |||
seq2  AGGCCT-CCATTAAGCTGAATCCCACTT--GGACTGTTGC-GGACCCTCT  46

seq1  TTTCCTCA-GGCTCCTC-TCCATTC-ATATCCCTGT-AATTCTTTCAGTC  96
      |||||||| |||||||| ||||||| |||||||||| |||||||||||||
seq2  TTTCCTCAGGGCTCCTCTTCCATTCAATATCCCTGTAAATTCTTTCAGTC  96

seq1  AGGAACAATTATGGGAGGGACCTGGGAGGAAAAGGGGACTGAAGCTCTGT  146
      |||||||||| ||||| |||||||||||||||||||||||||||||||||
seq2  AGGAACAATTTTGGGA-GGACCTGGGAGGAAAAGGGGACTGAAGCTCTGT  145

seq1  AGGCAACCTCTGGAGGTAAGAGGTTGAGCATACCCTCC-AGGGTGTATCA  195
      |||| ||||||||||||||||||||||||||||||||| |||||||||||
seq2  AGGCCACCTCTGGAGGTAAGAGGTTGAGCATACCCTCCAAGGGTGTATCA  195

seq1  GAGAACTGGGAGGTGAGAGACTTTCAGGACTCAAAGGGAGGGAACGTGGA  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAACTGGGAGGTGAGAGACTTTCAGGACTCAAAGGGAGGGAACGTGGA  245

seq1  TTAAATGCCCTACATTGGGGAGAGGGAACTCATAGAGCCTACCTCCAGCA  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATGCCCTACATTGGGGAGAGGGAACTCATAGAGCCTACCTCCAGCA  295

seq1  GAAAGACAGGGCATAAAGTGAGGGGAGGGGTTGCCATCCCATTTTCCAAA  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGACAGGGCATAAAGTGAGGGGAGGGGTTGCCATCCCATTTTCCAAA  345

seq1  TTTATAATTGTGCTTGATTATTATAGAAACATTAATATCAACAGTACAAT  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATAATTGTGCTTGATTATTATAGAAACATTAATATCAACAGTACAAT  395

seq1  TTCACTGAGAACTTCTGTACCATTCTGTGAACAATTGATAGTTTTTCTTT  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACTGAGAACTTCTGTACCATTCTGTGAACAATTGATAGTTTTTCTTT  445

seq1  TCTTACATATTTAATGCTTTGAAATAAGTTTGTTATGCAATCCACGAAAA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTACATATTTAATGCTTTGAAATAAGTTTGTTATGCAATCCACGAAAA  495

seq1  TACCCTTTTTAAAAATATGACATTATGACACTTTAATATTTCTATATATG  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCTTTTTAAAAATATGACATTATGACACTTTAATATTTCTATATATG  545

seq1  CTCAATATAAGACTATTAAAATATAAATCTGATTTTCCTAATAAATTTTA  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAATATAAGACTATTAAAATATAAATCTGATTTTCCTAATAAATTTTA  595

seq1  GTTAATTAAAAAATTACTGGTTATTTTATTTATTTACTTCAAATGTTATC  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAATTAAAAAATTACTGGTTATTTTATTTATTTACTTCAAATGTTATC  645

seq1  CCTCATTCCATTCTCCTCTGCAAACTCGCTATGTCATTCTTTCTTCCACC  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCATTCCATTCTCCTCTGCAAACTCGCTATGTCATTCTTTCTTCCACC  695

seq1  TGCTTCTATGAGGGCACTCCCCAACCCATCCAACCACTTCTGCCTCACTG  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTCTATGAGGGCACTCCCCAACCCATCCAACCACTTCTGCCTCACTG  745

seq1  CCATAGAATTCCCCTATGCTGCAGCATTGAGCCTTCACAGGACCAAGGGC  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATAGAATTCCCCTATGCTGCAGCATTGAGCCTTCACAGGACCAAGGGC  795

seq1  TTCCCCTCACATTAATGCCAAATAAGGGCATCCTCTGCTACATATGCAGC  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCCTCACATTAATGCCAAATAAGGGCATCCTCTGCTACATATGCAGC  845

seq1  TACATATGAAAGCATGGGTCCCTCCATGTCTTTGGTTGGTGATTTAGTCC  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATATGAAAGCATGGGTCCCTCCATGTCTTTGGTTGGTGATTTAGTCC  895

seq1  CTGGGAGCTCTGGGGAGTCTTGGTTGATATTGTGTTCTTCTTATGGAGTT  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGAGCTCTGGGGAGTCTTGGTTGATATTGTGTTCTTCTTATGGAGTT  945

seq1  ACAAAGCCCTTTAGCTCCTTCACTCCTACTCCTAACTCCTCCATTGGGGT  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAGCCCTTTAGCTCCTTCACTCCTACTCCTAACTCCTCCATTGGGGT  995

seq1  CCCTATACTCAGTTCAATGGTTGACTGCAAGCATCCGTTTCTGTATTGGT  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTATACTCAGTTCAATGGTTGACTGCAAGCATCCGTTTCTGTATTGGT  1045

seq1  AAGGTTCTGGCAGAGCATCTCAGGAGACAGTTATAACAGGCTCCTGTCAG  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTTCTGGCAGAGCATCTCAGGAGACAGTTATAACAGGCTCCTGTCAG  1095

seq1  AAAGCACTTCTTG  1108
      |||||||||||||
seq2  AAAGCACTTCTTG  1108