BAC Information

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BAC

Clone NameB6Ng01-090O19
Chromosome10 (Build37)
Map Location 106,022,509 - 106,023,147
singlet/doubletsinglet
Overlap genePpfia2
Upstream geneBC067068, Ccdc59, EG667758, EG639162, Olfr1556-ps1
Downstream gene8430416H19Rik, Lin7a, Myf5, Myf6, Ptprq
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-090O19.bB6Ng01-090O19.g
ACCDH903097DH903098
length6421,228
definitionDH903097|Mus musculus domesticus DNA, BAC clone: B6Ng01-090O19, 5' end.DH903098|Mus musculus domesticus DNA, BAC clone: B6Ng01-090O19, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcattcatattatcgtcatcatttttaggaaaacagataatgtctt
cttttcatatcaataaattaatatggtatacattagaaatattctaagca
aattgttacaccacaccgccagcatttctatttcctcttcatgtaatgtg
cacatatgtccacacagtggcactatttctttagaaacgccagtgggaac
cggttttgctttgtgtttgcatagtgctccctgataagatactggcctca
gaattctaaaagttctcaggaaggaagtgaaatgcatttattttaaaaaa
aaaaattgattggctgttcattgtctaaaggtattaatacctgagggaag
tcttgataacaatccatgtttaaatgttaaaaatctgaatcccagtaatg
ggggctcaggccttaaccagaaaatatggaaaaggtcatgggtaggaaat
aagtttataacccaaaagctcctcccaaaattacccgaaaattaaacact
aggattgtaacagggcttgccatatctaaatccttacccattaaactaac
ccaccaaagaattatatgtttaagcattttcttacctggaatttgctagg
ggtgaaacccccaggaatttggtaaaatggcaagggaggaat
gaattcctgatctttccaaaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcatatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcggttagcgagaattttattgaggatttttgc
atcgatattcataagagaaattggtctgaagttctctatctttgttgaat
ctttctatggtttaggtatcagagtaatatttggcttcataaaatgagtt
gggtagagtaccttctacttctattttgtgaaatagtttgtgaagaattg
gaattagatcttctttgaaggtctgatagaactctgcactaaacccatct
ggtcctgggctttttttggttgggagactattaataactgcttctatttc
tttaggtgatatgggactgtttagatggtcaacttgatcctgattcaact
ttggtacctggtatctgtccagaaatttgtccatttcgtccaggttttcc
agttttgttgagtatagccttttgtagaaggatctgatggtgttttggat
ttcttcaggatctgttgttatgtctcccttttcatttctgattttgttaa
ttaggattttgtccctgtgccctttagtgagtctagctaagggtttatct
atcttgttgattttctcaagaaccaactcctcctttggttaattctttga
atagttcttcttatttccacttggttgatttcacccctgagtttgattat
tttcctgctgttctactcctcttgggtgatttgcttccttttttctagag
cttttaagatgtgttgtcaagctgctagtatgtgctgtctcggtttcttc
ttggaagcactcagagctatgagttttccctctttaaaaatgctttcatt
gtgttccataaggtttgggtacgtttgttgcttttatttattaaaacttt
aaaaagtcttaaatttcttcttgtattcctttctgaacaaggatcatgga
aagagagttatatcagatactctgtaagttgacttccaaaaataattggt
atgaaaacatcttaagccagtaggcctgataaatggtaaacatggaacat
ttgacatatatattgtgtggaactctga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_106022509_106023147
seq2: B6Ng01-090O19.b_47_688 (reverse)

seq1  ATTCCTCCCTTGCACTTCTACCTATATTCCTTGGTGGTTTCACCACTAGC  50
      |||||||||||||  || |||| | ||||| ||| ||||||||| |||||
seq2  ATTCCTCCCTTGCCATTTTACC-AAATTCC-TGGGGGTTTCACCCCTAGC  48

seq1  AGAATTCCAGCTAATGAAATGACTTAAACATATGACTTCTTTGTTGGTTT  100
      | |||||||| |||  ||||| ||||||||||| | ||||||| ||| ||
seq2  A-AATTCCAGGTAAGAAAATG-CTTAAACATAT-AATTCTTTGGTGGGTT  95

seq1  AGTTTAATGTGTAAGGATTTAGATATGTGCAGCCCTGTTAC-ATCCTAGT  149
      ||||||||| |||||||||||||||||   ||||||||||| ||||||||
seq2  AGTTTAATGGGTAAGGATTTAGATATGGCAAGCCCTGTTACAATCCTAGT  145

seq1  GTTTAATTTCTGTGT-ATTTTTGGAGGAGCTTCTGGGTTATAAACTTATC  198
      |||||||||  | || ||||| |||||||||| |||||||||||||||| 
seq2  GTTTAATTTTCGGGTAATTTTGGGAGGAGCTTTTGGGTTATAAACTTATT  195

seq1  TCCTA-CCATGACC-TCTCCATA-TTTCTTGCTGAGGCCTGAGCCCACAT  245
      ||||| |||||||| | |||||| ||||| | | |||||||||||| |||
seq2  TCCTACCCATGACCTTTTCCATATTTTCTGGTTAAGGCCTGAGCCCCCAT  245

seq1  TACT-GGATTCAGA-TTTTAACATTTAAACATGGATTGTTATCAAGACTT  293
      |||| ||||||||| |||||||||||||||||||||||||||||||||||
seq2  TACTGGGATTCAGATTTTTAACATTTAAACATGGATTGTTATCAAGACTT  295

seq1  -CCTCAGGTATTAATACCTTTAGACAATGAACAGCCAATCAATTTTTTTT  342
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCAGGTATTAATACCTTTAGACAATGAACAGCCAATCAATTTTTTTT  345

seq1  TTTAAAATAAATGCATTTCACTTCCTTCCTGAGAACTTTTAGAATTCTGA  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAATAAATGCATTTCACTTCCTTCCTGAGAACTTTTAGAATTCTGA  395

seq1  GGCCAGTATCTTATCAGGGAGCACTATGCAAACACAAAGCAAAACCGGTT  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAGTATCTTATCAGGGAGCACTATGCAAACACAAAGCAAAACCGGTT  445

seq1  CCCACTGGCGTTTCTAAAGAAATAGTGCCACTGTGTGGACATATGTGCAC  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACTGGCGTTTCTAAAGAAATAGTGCCACTGTGTGGACATATGTGCAC  495

seq1  ATTACATGAAGAGGAAATAGAAATGCTGGCGGTGTGGTGTAACAATTTGC  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACATGAAGAGGAAATAGAAATGCTGGCGGTGTGGTGTAACAATTTGC  545

seq1  TTAGAATATTTCTAATGTATACCATATTAATTTATTGATATGAAAAGAAG  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAATATTTCTAATGTATACCATATTAATTTATTGATATGAAAAGAAG  595

seq1  ACATTATCTGTTTTCCTAAAAATGATGACGATAATATGAATGAATTC  639
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTATCTGTTTTCCTAAAAATGATGACGATAATATGAATGAATTC  642