BAC Information

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BAC

Clone NameB6Ng01-091K06
Chromosome10 (Build37)18 (Build37)
Map Location 104,053,903 - 104,054,36380,864,994 - 80,865,771
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneEG627488, EG667692, EG667695, LOC100043292
Downstream geneLOC100042383, Tmtc2, EG627573
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-091K06.bB6Ng01-091K06.g
ACCDH903610DH903611
length984781
definitionDH903610|Mus musculus domesticus DNA, BAC clone: B6Ng01-091K06, 5' end.DH903611|Mus musculus domesticus DNA, BAC clone: B6Ng01-091K06, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(104,053,903 - 104,054,363)(80,864,994 - 80,865,771)
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagaagccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagagcatcatcctgagtgaggtaacacaatcacaaa
ggaactcacacaatatgtactcactgataagtggatactagcccaaaacc
taggatacccactgtattagtcagggttctctagagtcacagaacttatg
gatagtctctagataataaaggaatttattgatgacttacagtcggcagc
tcaattcccaacaatcgttcagtcacagctgtgaatggaagtccaaggat
ctagcagttactcagtctcacgcagcaagcacgcgaaggagcacgagcaa
gagctagactcccttcttccaatgtccttatattgtctccagcaaaaggt
gtagcccagattaaaggtgtgttccaccacacctttaatcccagatgaaa
ggcatagcccagattaaagtgtgttccttaactcggagattcaatcttct
ggaatccatagccactatggctcagatcttcaaa
gaattccatcggagagactagtagtaatggctggaacctggtgtcctctg
cactcctccctttccgggtacctcccttccccccctaaggatctgtgggg
ctatttcttgcggctgaggctccctccccattcccaccacagaccacctt
ctttgctgcaggactcttgaagactgcttggtgctttcttatggtgccgt
tcaccatcctccttgctaaaaccaattacctagcaatcccgcaactcatc
acagggctctgagttccatgttccagctctcctcctttctgcccaccttc
tggccaggccattcctttgtggtcggcatgaggggctgggggcttatcca
ttggcaaagtggatgacagcaatcggagaaggctataattgtcatcgact
gagtcctggcagccacctgtgtatcctggcatcctacagtgtatctcatc
caaccccggcttcccccaaggcatcagggagctatggggcattgcaagca
tggtgcatgaggtgggcggatctcaggattctaaatagaatgatggggtg
ggggtagggcttctaggagtgaggcagaggaggtgggaagggcggtagct
accagcatggggcagtttcactgcgtcttatcctgtgggctatatactct
gtccacaagatactctgtggtagggtaagcggtgcaactggcattgatag
gacgtctgttcacaccttttttctcttcctgaaggataggtatacagggc
agtcatgaaaaggatggcctaaaacacagtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_104053903_104054363
seq2: B6Ng01-091K06.b_47_517 (reverse)

seq1  TTTAATAG----------CTCCATTGTGTAAATGTACCACATTTTCTGTA  40
      ||||||||          |||||||||||| |||||||||||||||||||
seq2  TTTAATAGCTGAGTAGTACTCCATTGTGTAGATGTACCACATTTTCTGTA  50

seq1  TCTATTCCTCTGTTGAGGGGCATCTGGGTTCTTTCCAGCTCCTGGCTATT  90
      || ||||||||||||||||||||||||||||||||||| | |||||||||
seq2  TCCATTCCTCTGTTGAGGGGCATCTGGGTTCTTTCCAGTTTCTGGCTATT  100

seq1  ATAAATAAGGCTGCTATGAATATAGTGGAGCATGTGTCCTTCTTACCGGT  140
      |||||||||||||||||||| |||||||||||||||||||||||||| ||
seq2  ATAAATAAGGCTGCTATGAACATAGTGGAGCATGTGTCCTTCTTACCAGT  150

seq1  TGGGGCATCTTCTGGATATATGCCCAGAAGAGGTATTGCTGGATCCTCCG  190
      |||||| |||||||||||||||||||| ||||||||||||||||||||||
seq2  TGGGGCTTCTTCTGGATATATGCCCAGGAGAGGTATTGCTGGATCCTCCG  200

seq1  GTAGTACTATGTCCAATTTTCTGACGAACCGCCAGACGGATTTCCAGAGT  240
      |||||||||||||||||||||||| |||||||||||| ||||||||||||
seq2  GTAGTACTATGTCCAATTTTCTGAGGAACCGCCAGACTGATTTCCAGAGT  250

seq1  GGTTGTACAAGCCTGCAATCCCACCAACAATGGAGGAGTGTTCCTCTTTC  290
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGTACAAGCCTGCAATCCCACCAACAATGGAGGAGTGTTCCTCTTTC  300

seq1  TCCACATCCTCGCCAGCATCTGCTGTCACCTGAATTTTTGATCTTAGCCA  340
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACATCCTCGCCAGCATCTGCTGTCACCTGAATTTTTGATCTTAGCCA  350

seq1  TTCTGACTGGTGTGAGGTGGAATCTCAGGGTTGTTTTGATTTGCATTTCC  390
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCACTGGTGTGAGGTGGAATCTCAGGGTTGTTTTGATTTGCATTTCC  400

seq1  CTGATGATTAAGGATGTTGAACATTTTTTCAGGTGCTTCTCTGCCATTCG  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATGATTAAGGATGTTGAACATTTTTTCAGGTGCTTCTCTGCCATTCG  450

seq1  GTATTCCTCAGGTGAGAATTC  461
      |||||||||||||||||||||
seq2  GTATTCCTCAGGTGAGAATTC  471

seq1: chr18_80864994_80865771
seq2: B6Ng01-091K06.g_68_848 (reverse)

seq1  AACTGTG-TCTAGGCCATCC-TTTCATGACTGCCCTGTGTACCTCTCCTT  48
      ||||||| | |||||||||| ||||||||||||||||| ||||| |||||
seq2  AACTGTGTTTTAGGCCATCCTTTTCATGACTGCCCTGTATACCTATCCTT  50

seq1  CAGGAAGAG-AAAGAGGTGTGAACAGACGTCCTATCAATGCCAGTTGCAC  97
      ||||||||| ||| ||||||||||||||||||||||||||||||||||||
seq2  CAGGAAGAGAAAAAAGGTGTGAACAGACGTCCTATCAATGCCAGTTGCAC  100

seq1  CGCTTACCCTACCACAGAGTATCTTGTGGACAGAGTATATAGCCCACAGG  147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTTACCCTACCACAGAGTATCTTGTGGACAGAGTATATAGCCCACAGG  150

seq1  ATAAGACGCAGTGAAACTGCCCCATGCTGGTAGCTACCGCCCTTCCCACC  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGACGCAGTGAAACTGCCCCATGCTGGTAGCTACCGCCCTTCCCACC  200

seq1  TCCTCTGCCTCACTCCTAGAAGCCCTACCCCCACCCCATCATTCTATTTA  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTGCCTCACTCCTAGAAGCCCTACCCCCACCCCATCATTCTATTTA  250

seq1  GAATCCTGAGATCCGCCCACCTCATGCACCATGCTTGCAATGCCCCATAG  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCCTGAGATCCGCCCACCTCATGCACCATGCTTGCAATGCCCCATAG  300

seq1  CTCCCTGATGCCTTGGGGGAAGCCGGGGTTGGATGAGATACACTGTAGGA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCTGATGCCTTGGGGGAAGCCGGGGTTGGATGAGATACACTGTAGGA  350

seq1  TGCCAGGATACACAGGTGGCTGCCAGGACTCAGTCGATGACAATTATAGC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAGGATACACAGGTGGCTGCCAGGACTCAGTCGATGACAATTATAGC  400

seq1  CTTCTCCGATTGCTGTCATCCACTTTGCCAATGGATAAGCCCCCAGCCCC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTCCGATTGCTGTCATCCACTTTGCCAATGGATAAGCCCCCAGCCCC  450

seq1  TCATGCCGACCACAAAGGAATGGCCTGGCCAGAAGGTGGGCAGAAAGGAG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGCCGACCACAAAGGAATGGCCTGGCCAGAAGGTGGGCAGAAAGGAG  500

seq1  GAGAGCTGGAACATGGAACTCAGAGCCCTGTGATGAGTTGCGGGATTGCT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGCTGGAACATGGAACTCAGAGCCCTGTGATGAGTTGCGGGATTGCT  550

seq1  AGGTAATTGGTTTTAGCAAGGAGGATGGTGAACGGCACCATAAGAAAGCA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAATTGGTTTTAGCAAGGAGGATGGTGAACGGCACCATAAGAAAGCA  600

seq1  CCAAGCAGTCTTCAAGAGTCCTGCAGCAAAGAAGGTGGTCTGTGGTGGGA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGCAGTCTTCAAGAGTCCTGCAGCAAAGAAGGTGGTCTGTGGTGGGA  650

seq1  ATGGGGAGGGAGCCTCAGCCGCAAGAAATAGCCCCACAGATCCTTAGGGG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGGAGGGAGCCTCAGCCGCAAGAAATAGCCCCACAGATCCTTAGGGG  700

seq1  GGGAAGGGAGGTACCCGGAAAGGGAGGAGTGCAGAGGACACCAGGTTCCA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAGGGAGGTACCCGGAAAGGGAGGAGTGCAGAGGACACCAGGTTCCA  750

seq1  GCCATTACTACTAGTCTCTCCGATGGAATTC  778
      |||||||||||||||||||||||||||||||
seq2  GCCATTACTACTAGTCTCTCCGATGGAATTC  781