BAC Information

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BAC

Clone NameB6Ng01-091L11
Chromosome10 (Build37)
Map Location 11,382,729 - 11,529,593
singlet/doubletdoublet
Overlap genenone
Upstream geneGrm1, Shprh, Fbxo30, Epm2a, EG666732, LOC100039343
Downstream geneUtrn
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-091L11.bB6Ng01-091L11.g
ACCDH903666DH903667
length1,1841,119
definitionDH903666|Mus musculus domesticus DNA, BAC clone: B6Ng01-091L11, 5' end.DH903667|Mus musculus domesticus DNA, BAC clone: B6Ng01-091L11, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(11,528,400 - 11,529,593)(11,382,729 - 11,383,857)
sequence
gaattcacttcccggagagcctgaacctgtgaaagcaattaaaagagggc
agggcatccaaagtgttgggtgtgagggctgttcatgaacagctctacca
gactgagatttaatcataagggtgggaggcacagcagcaatcacggctca
gaggagtggggacgtggtgtggagtcttaggcactaggatatctcatgct
ggttttccaaagcttttcttccattatttggcacttctgatagcctctca
atgcttgctcaaaaatttccatttttattaagctatcctgagtaggattc
aaaaactgcccaccaagccacttgatgggcatgctctgccctgtgcagga
gcactttggcatggaacatgccaatcattttcttgcttcttagattaagt
ccagctgtgcatattccaaaaagggatttcagaatgcatttatagagctt
tattcaatggcttcattacattccctcctggttttcccctttgatattaa
gctgcttacagacctggactctcgctttgtcctttccttctttcaatcaa
cagtaaagcatttgattatgctctgtttgagcagccaaagggacatcctt
gcagttacgtagtatttcataatcatcagatttcccaacatttatagcca
gatcattttagcaaactgtttttcactaccccggttgtttgtgtgacatt
tatcaattcattaaattgtatgaatcatatatttattcattcatctctga
atccacttaagaagagtggtcaccttcactggacaacattaaaaaatcgt
tttacagttttcagcaaaatcctatccatgcaaaatatttctacttttgc
aaaatatccagagacagtcacttcttctcaaacatggccattggtcacaa
cctagccaaaacttctgtcttttttcctaatccaagcaaaataacaagtc
cgcggttcacttactgcacatttagaagttattactcgaagactgaagtt
gcttcaagactccatcttttacttttcaaacctctgtctccaaaatactc
tgcctagcaggaagtaatacagctggtccctgcttgatatatacctgcca
aagtctgtcttaagaaaatacttttgtcactgatacaaaatgatgcattg
gaagtggtttgtgtatgccctgcagggtctggga
gaattccagatggccaccaaatactactgacaggaaagactaggtaaata
attggaataacaaaaaaggacaacagttcaaaaaatctgtagccatttta
ggcgatttcaccttgtccaatccatgttcactcaggctgtgcattgcatg
acctggggaatccttagaaatataattagatctataatttggacattagg
aaaaattggattttttttttctgtttgttccaaattgatttgaccatgag
gacttcggtgggttttgtaatgactctataatattagaagtctgagtctt
tacatcactaaaccattacatttatgcatgcaaatgtttgtggttaatac
cacagtgtccagtatgtggagtattggataagtagtagctattgttatta
caaaaaccacatcgatcattcactgttttcacactcagtgaaggcggtat
gctttgctgttctctcctgtttcatgtctgttagcatttttacaaagaat
ggtgtatatgcattttctgtatttctcagcctaattagacttgagggtat
ttgagggaagacagaagctcatcaatgcaaactgcaagcaagtaactttt
gaagacaggttttgaggtctttgcttgactctgctatagttgaaggtcat
tttctccctagccagagagaaaattattgtcattgattatctttgtaaga
aggagacttgggatcaagggggataggctcagaaacatgtcgcacatctg
caaatctcaggagacagaggttcacatgaatacgtttaggagagggctca
taagaactaccaataaggtagcaattcttccccttgtttatgcttttgcc
tcctgaggagcctggtaatatttctgcaccctttggtgcagatcaagagg
gagactaagaggacataatacttaatgcccttgctgatgggtaactgctt
aatgtgtgcatagaaatcagataataaccagctacccacactgcccagat
cgtttggctgaaatgaaaactttacgtgtttccccattacagttcctacc
ttcattggggatatgacataaaacagaagtcttggaatcaaacagaaaat
gattgccatgtttgggaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_11528400_11529593
seq2: B6Ng01-091L11.b_45_1228 (reverse)

seq1  TCCCAGAGCACCTGCAGGCGCATACACAAACACACTTCTCAAATGCAATC  50
      |||||||   |||||||| |||||||||||| ||||  || ||||| |||
seq2  TCCCAGA--CCCTGCAGG-GCATACACAAAC-CACT--TCCAATGC-ATC  43

seq1  ATTTTGTATCAGTGACAAAAGTAATCTACTATAGACAGACTTTGGGCAGT  100
      |||||||||||||||||||||| || | ||  ||||||||||| ||||| 
seq2  ATTTTGTATCAGTGACAAAAGT-ATTTTCTTAAGACAGACTTT-GGCAGG  91

seq1  GATATATCAAGCAGGGGACAGCTGTATTAACTTCCTGCTAGGCAGAAGTA  150
       |||||||||||||||  |||||||||| |||||||||||||||| ||||
seq2  TATATATCAAGCAGGGACCAGCTGTATT-ACTTCCTGCTAGGCAG-AGTA  139

seq1  TTTTGGGAGACAGA-GTTTGAAAAGTAAAAGATGGAGTCTTGAAGCAAC-  198
      |||| ||||||||| |||||||||||||||||||||||||||||||||| 
seq2  TTTT-GGAGACAGAGGTTTGAAAAGTAAAAGATGGAGTCTTGAAGCAACT  188

seq1  TCAGTCTTCGAGTAATAACTTCTAAATGTGCAGTAAGTGAACCGCGGACT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTCTTCGAGTAATAACTTCTAAATGTGCAGTAAGTGAACCGCGGACT  238

seq1  TGTTATGTTGCTTGGATTAGGAAAAAAGACAGAAGTTTTGGCTAGGTTGT  298
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTATTTTGCTTGGATTAGGAAAAAAGACAGAAGTTTTGGCTAGGTTGT  288

seq1  GACCAATGGCCATGTTTGAGAAGAAGTGACTGTCTCTGGATATTTTGCAA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCAATGGCCATGTTTGAGAAGAAGTGACTGTCTCTGGATATTTTGCAA  338

seq1  AAGTAGAAATATTTTGCATGGATAGGATTTTGCTGAAAACTGTAAAACGA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAGAAATATTTTGCATGGATAGGATTTTGCTGAAAACTGTAAAACGA  388

seq1  TTTTTTAATGTTGTCCAGTGAAGGTGACCACTCTTCTTAAGTGGATTCAG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTAATGTTGTCCAGTGAAGGTGACCACTCTTCTTAAGTGGATTCAG  438

seq1  AGATGAATGAATAAATATATGATTCATACAATTTAATGAATTGATAAATG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGAATGAATAAATATATGATTCATACAATTTAATGAATTGATAAATG  488

seq1  TCACACAAACAACCGGGGTAGTGAAAAACAGTTTGCTAAAATGATCTGGC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACACAAACAACCGGGGTAGTGAAAAACAGTTTGCTAAAATGATCTGGC  538

seq1  TATAAATGTTGGGAAATCTGATGATTATGAAATACTACGTAACTGCAAGG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAATGTTGGGAAATCTGATGATTATGAAATACTACGTAACTGCAAGG  588

seq1  ATGTCCCTTTGGCTGCTCAAACAGAGCATAATCAAATGCTTTACTGTTGA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCCCTTTGGCTGCTCAAACAGAGCATAATCAAATGCTTTACTGTTGA  638

seq1  TTGAAAGAAGGAAAGGACAAAGCGAGAGTCCAGGTCTGTAAGCAGCTTAA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAAGAAGGAAAGGACAAAGCGAGAGTCCAGGTCTGTAAGCAGCTTAA  688

seq1  TATCAAAGGGGAAAACCAGGAGGGAATGTAATGAAGCCATTGAATAAAGC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAAAGGGGAAAACCAGGAGGGAATGTAATGAAGCCATTGAATAAAGC  738

seq1  TCTATAAATGCATTCTGAAATCCCTTTTTGGAATATGCACAGCTGGACTT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATAAATGCATTCTGAAATCCCTTTTTGGAATATGCACAGCTGGACTT  788

seq1  AATCTAAGAAGCAAGAAAATGATTGGCATGTTCCATGCCAAAGTGCTCCT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTAAGAAGCAAGAAAATGATTGGCATGTTCCATGCCAAAGTGCTCCT  838

seq1  GCACAGGGCAGAGCATGCCCATCAAGTGGCTTGGTGGGCAGTTTTTGAAT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAGGGCAGAGCATGCCCATCAAGTGGCTTGGTGGGCAGTTTTTGAAT  888

seq1  CCTACTCAGGATAGCTTAATAAAAATGGAAATTTTTGAGCAAGCATTGAG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACTCAGGATAGCTTAATAAAAATGGAAATTTTTGAGCAAGCATTGAG  938

seq1  AGGCTATCAGAAGTGCCAAATAATGGAAGAAAAGCTTTGGAAAACCAGCA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTATCAGAAGTGCCAAATAATGGAAGAAAAGCTTTGGAAAACCAGCA  988

seq1  TGAGATATCCTAGTGCCTAAGACTCCACACCACGTCCCCACTCCTCTGAG  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGATATCCTAGTGCCTAAGACTCCACACCACGTCCCCACTCCTCTGAG  1038

seq1  CCGTGATTGCTGCTGTGCCTCCCACCCTTATGATTAAATCTCAGTCTGGT  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTGATTGCTGCTGTGCCTCCCACCCTTATGATTAAATCTCAGTCTGGT  1088

seq1  AGAGCTGTTCATGAACAGCCCTCACACCCAACACTTTGGATGCCCTGCCC  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCTGTTCATGAACAGCCCTCACACCCAACACTTTGGATGCCCTGCCC  1138

seq1  TCTTTTAATTGCTTTCACAGGTTCAGGCTCTCCGGGAAGTGAATTC  1194
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTAATTGCTTTCACAGGTTCAGGCTCTCCGGGAAGTGAATTC  1184

seq1: chr10_11382729_11383857
seq2: B6Ng01-091L11.g_68_1186

seq1  GAATTCCAGATGGCCACCAAATACTACTGACAGGAAAGACTAGGTAAATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGATGGCCACCAAATACTACTGACAGGAAAGACTAGGTAAATA  50

seq1  ATTGGAATAACAAAAAAGGACAACAGTTCAAAAAATCTGTAGCCATTTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGAATAACAAAAAAGGACAACAGTTCAAAAAATCTGTAGCCATTTTA  100

seq1  GGCGATTTCACCTTGTCCAATCCATGTTCACTCAGGCTGTGCATTGCATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGATTTCACCTTGTCCAATCCATGTTCACTCAGGCTGTGCATTGCATG  150

seq1  ACCTGGGGAATCCTTAGAAATATAATTAGATCTATAATTTGGACATTAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGGGGAATCCTTAGAAATATAATTAGATCTATAATTTGGACATTAGG  200

seq1  AAAAATTGGATTTTTTTTTTCTGTTTGTTCCAAATTGATTTGACCATGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATTGGATTTTTTTTTTCTGTTTGTTCCAAATTGATTTGACCATGAG  250

seq1  GACTTCGGTGGGTTTTGTAATGACTCTATAATATTAGAAGTCTGAGTCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTCGGTGGGTTTTGTAATGACTCTATAATATTAGAAGTCTGAGTCTT  300

seq1  TACATCACTAAACCATTACATTTATGCATGCAAATGTTTGTGGTTAATAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATCACTAAACCATTACATTTATGCATGCAAATGTTTGTGGTTAATAC  350

seq1  CACAGTGTCCAGTATGTGGAGTATTGGATAAGTAGTAGCTATTGTTATTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGTGTCCAGTATGTGGAGTATTGGATAAGTAGTAGCTATTGTTATTA  400

seq1  CAAAAACCACATCGATCATTCACTGTTTTCACACTCAGTGAAGGCGGTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAACCACATCGATCATTCACTGTTTTCACACTCAGTGAAGGCGGTAT  450

seq1  GCTTTGCTGTTCTCTCCTGTTTCATGTCTGTTAGCATTTTTACAAAGAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTGCTGTTCTCTCCTGTTTCATGTCTGTTAGCATTTTTACAAAGAAT  500

seq1  GGTGTATATGCATTTTCTGTATTTCTCAGCCTAATTAGACTTGAGGGTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTATATGCATTTTCTGTATTTCTCAGCCTAATTAGACTTGAGGGTAT  550

seq1  TTGAGGGAAGACAGAAGCTCATCAATGCAAACTGCAAGCAAGTAACTTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGGGAAGACAGAAGCTCATCAATGCAAACTGCAAGCAAGTAACTTTT  600

seq1  GAAGACAGGTTTTGAGGTCTTTGCTTGACTCTGCTATAGTTGAAGGTCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGACAGGTTTTGAGGTCTTTGCTTGACTCTGCTATAGTTGAAGGTCAT  650

seq1  TTTCTCCCTAGCCAGAGAGAAAATTATTGTCATTGATTATCTTTGTAAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCCCTAGCCAGAGAGAAAATTATTGTCATTGATTATCTTTGTAAGA  700

seq1  AGGAGACTTGGGATCAAGGGGGATAGGCTCAGAAACATGTCGCACATCTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGACTTGGGATCAAGGGGGATAGGCTCAGAAACATGTCGCACATCTG  750

seq1  CAAATCTCAGGAGACAGAGGTTCACATGAATACGTTTAGGAGAGGGCTCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATCTCAGGAGACAGAGGTTCACATGAATACGTTTAGGAGAGGGCTCA  800

seq1  TAAGAACTACCAATAAGGTAGCAATTCTTCCCCTTGTTTATGCTTTTGCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAACTACCAATAAGGTAGCAATTCTTCCCCTTGTTTATGCTTTTGCC  850

seq1  TCCTGAGGAGCCTGGTAATATTTCTGCACCCTTTGGTGCAGATCAAGAGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGAGGAGCCTGGTAATATTTCTGCACCCTTTGGTGCAGATCAAGAGG  900

seq1  GAGACTAAGAGGACATAATACTTAATGCCCTTGCTGATGGGTAACTGCTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACTAAGAGGACATAATACTTAATGCCCTTGCTGATGGGTAACTGCTT  950

seq1  AATGTGTGCATTAGATATTCAGATAAATAACCAGCTACCCACACTGCCCA  1000
      |||||||||| |||| | |||||| |||||||||||||||||||||||||
seq2  AATGTGTGCA-TAGA-AATCAGAT-AATAACCAGCTACCCACACTGCCCA  997

seq1  GATCGTTTGGCTGAAATGATAACTTTTACGTTGTTTCTCATTACAGTTTT  1050
      ||||||||||||||||||| ||| |||||||  || | ||||||||  ||
seq2  GATCGTTTGGCTGAAATGAAAAC-TTTACGTGTTTCCCCATTACAG--TT  1044

seq1  CCTACCTCCATTGGGATTATGACATTAAAACAGAAGTCATGGAAAAATCA  1100
      ||||||| |||||||  ||||||| ||||||||||||| |||   |||||
seq2  CCTACCTTCATTGGGGATATGACA-TAAAACAGAAGTCTTGG---AATCA  1090

seq1  AACAGAAAATGATTTGCATGTTTTGGAAT  1129
      ||||||||||||||  ||||||| |||||
seq2  AACAGAAAATGATTGCCATGTTTGGGAAT  1119