BAC Information

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BAC

Clone NameB6Ng01-092D18
Chromosome10 (Build37)
Map Location 80,648,890 - 80,648,956
singlet/doubletsinglet
Overlap geneDapk3
Upstream geneEfna2, Mum1, Ndufs7, Gamt, Dazap1, Rps15, Apc2, 2310011J03Rik, Pcsk4, Reep6, Adamtsl5, 6330514A18Rik, Rkhd1, Mbd3, Uqcr, Tcfe2a, Onecut3, Atp8b3, Rexo1, Klf16, D10Bwg1364e, Scamp4, Csnk1g2, Btbd2, Mknk2, Mobkl2a, 9030607L17Rik, Ap3d1, Dot1l, Plekhj1, Sf3a2, Amh, Jsrp1, Oaz1, BC072620, Lsm7, 3110056O03Rik, Tmprss9, Timm13, Lmnb2, Gadd45b, Gng7, LOC100042403, Diras1, Slc39a3, Sgta, Thop1, Creb3l3, Map2k2, Zbtb7a, Pias4, Eef2
Downstream geneItgb1bp3, Atcay, 9130206N08Rik, Matk, Mrpl54, Apba3, Tjp3, Pip5k1c, 2510012J08Rik, Tbxa2r, Gipc3, Hmg20b, F630110N24Rik, 4930404N11Rik, Fzr1, Dohh, 2210404O07Rik, Nfic, Brunol5, Ncln, Edg6, Gna15, Gna11, Aes, Tle2, Tle6, BC025920, Sirt6, Ankrd24, LOC100040916, EG666448, EG666458, LOC666711, LOC382388, LOC100040944, EG210583, EG666738, EG666501, 1700123A16Rik, LOC666753, EG666537, BC062127, EG666542, EG666548, EG666790, LOC666571, AL117821, BC062115, 4933439G19Rik, BC024063, AU041133
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-092D18.bB6Ng01-092D18.g
ACCDH904052DH904053
length1,249770
definitionDH904052|Mus musculus domesticus DNA, BAC clone: B6Ng01-092D18, 5' end.DH904053|Mus musculus domesticus DNA, BAC clone: B6Ng01-092D18, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttggttagccctgcacccgatttttgaatagggttatttgatt
gtatggcatctaatttcttgagttatatatattgaatattagccctctat
ctggtgtaggatctgtaaagatcttttcccaacctgttgtttgctgattt
gtcctcttgacagtgtcctttgccctacagaagctttgcaattttctgag
gtcccatttgtcagttcttcattctataagaatggtgttctgttcaggaa
aatttctcctgtggccagatactcaaggttcttccccactttcttttgta
tccgtttcactgtatctgattttctgtggaggtccttgatccatttggac
atgagctttatacaaggagatgagaataaatcactttgcattcttctaca
cattgacaacctgttgtgccagcaccatttgttgaaaacactcttttttt
ttttccactgcctggttttagctcctttgtcaaagatcaagtgaccacag
gtgtatgggttcatttctgagtcctcaattctattccattgatctacctg
cctaccactgtaccaaaaccatgcagtttttccccaattgctctgtagta
cagctttaggtcagggatggtgattccaccagaagttcttttattgctga
gaatagatttcgatatcttgggttttttgttattccagatgaatttgcaa
attgctctttctaactctatgaaagattgagttggaattttgatggggat
tgcattgaatctgtagcttactttaggcaagatggccatttttactatat
taatcctgtcaatccatgagcatgggagatctttctattttctgagatct
tcttcaatttctttcttcatagacttgaagttcttgtcatacaaatgttt
tattgctcagtaagggtcacaccaaggtattttatacttttgtgagtatt
gtgaaggatgtttccatagtttctttctcagcctgtttgtagcctcccac
agcctggaccaggctggctcagactgttctgccactgtcagctagccacc
taggtgaatcttccgacttggataggtctattgttctgcccctactgagt
ttctcaagacaccactaccagctgaaagctgactggttctgaagcatctg
ataagcacagctatgtagtgaatgcaaagcttagcaagcacttgacctgc
aatgtgggaatgctcccctttagccgagtcgactcagaagaaacttgct
gaattcatttttttaaagatggtataataaagtctgtagaagactcatat
tctgtctaaggtgggctctacgggacttttttgtttaaatcctgacttga
caaattagaaaggcctaaatatatattggatattagtcccctatccgatt
tgggataggtaaagatccttccccaatttgttggtggtcattttgtctta
ttgacagtgtcttttgccttgcagaagctctgcaattttatgagggccaa
agaccaaagtgtggacactttgccccttcttagaattgggaacaaaacac
ccatggaaggagttacagagacaaaatttggagctgtgacgaaaggatgg
accatcttgtgattgccatatctagggatccatcctataatcagcttcca
aacgctgacaccattgcatacactagcaagattttgctgaaaggacccag
atatagctgtctcttgtgagactatgccggggcctagcaaacacagaagt
ggatgctcacagtcagctatttgatggatcacagggcccccaatggagga
gctagagaaagtacccaaggagctaaagggaactgcaaccctataggtgg
aacaacaatatgaactaaccagtacgcaggagctcttgtctctagctgca
tatgtatcaaaagatggcctagttggccatcactggaaaaagaggcccct
tggacttgcaaactttatatgccccagtacaggggaacgccagggccaaa
aagggggagtgggtaggtag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_80648890_80648956
seq2: B6Ng01-092D18.g_772_838 (reverse)

seq1  CTACCCACCCACTCCCCCTTTTTGGCCCTGGCGTTCCCCTGTACTGGGGC  50
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCTACCCACTCCCCCTTTTTGGCCCTGGCGTTCCCCTGTACTGGGGC  50

seq1  ATATAAAGTTTGCAAGT  67
      |||||||||||||||||
seq2  ATATAAAGTTTGCAAGT  67