BAC Information

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BAC

Clone NameB6Ng01-092O17
Chromosome10 (Build37)19 (Build37)
Map Location 104,053,516 - 104,054,36327,588,075 - 27,589,142
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneEG627488, EG667692, EG667695, LOC100043292
Downstream geneLOC100042383, Tmtc2, EG627573
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-092O17.bB6Ng01-092O17.g
ACCDH904547DH904548
length1,0201,063
definitionDH904547|Mus musculus domesticus DNA, BAC clone: B6Ng01-092O17, 5' end.DH904548|Mus musculus domesticus DNA, BAC clone: B6Ng01-092O17, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(104,053,516 - 104,054,363)(27,588,075 - 27,589,142)
sequence
gaattctcaactgaggaataccgaagggctgagaagcatttgaaaaaaat
gttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgaga
ttccacctcacaccagtcagaatggctaggatcaaaaattcaggtgacag
cagatggtggcgaggatgtggagaaagaggaacactcctccattgctggt
gggattgcaagcttgtacaaccactctggaaatcagtctggtggttcctc
agaaaactggacatagtactaccagaagatccagcaatacctctcctggc
catatacccagaagatgttccaactggtaataaggacacatgctccacta
tgttcatagcaaccctatttataatagccagaagctggaaagaacccaga
tgtccctcaacagaggaatggatacaaaaaaatgtggttcatttacacaa
cggagtactactcagttattaaaaacaatgaatttatgaaattcttaggc
aaatggttgtatctggaggatatcatcgtgagtgaggtaatccaatcaca
aaagaactcacatgacatgcactcattgataagtggctattagcctagaa
acctagaatacccaagatacaatttgcaaaacacaagaaaatcatgaaga
aggaagaccatctcttgttcttacggctgctagaagaagactgacttctg
ggcagctaggacaagggtattaaggcccacaccaacagtgacacacctac
tcaaataaggctacacctcctaatagtgccactccttccctgggccaaac
atatacaaactatcacgagtgtgtaggaagacagatggagatttgataca
tttctaatgcctttgcatggtatagagttagagattataatggcaatgct
tgaagtcagtactctatctgttgccataaattcccaacctaaataagctc
tggcaatgaaaacacaacttagttaatatgaatatatgctgtgcacctag
attgggcagatctaccacta
gaattcctgtattaagaaataaagaattctatctgggctataaacacaac
tctaagaggaggtatgttgtaacttcctggtgaggaccaaactgcttgct
tctagcccagcgtgtagcatcaggctgggggatggtgtagtagatatcta
cttgacttggcagttctgtctgaggccatagaaactgatatagagaaccc
tgacaccacagatatgagtgtgggtatgagtgtgcccagaggtagaacat
tgcagggcagtcacaaagtgtgacataggttccagaaaaaaagattgata
cagaaatacagtcttgttttaagagcaaaatcaagatgaattcaatagat
ataacctgcaatgtagtgaaacaggctctcagccttcctaatgctgtgac
cctttaatgcagttcctcatgtgtggtgatcccccaaccataaatttact
tcttaactagttttgttactgttatctacttttatgaaacacagtgtaaa
catctgatgtgccggatatctgatatgtgactcccaaggggctggggggt
ggtcgacccacaggttgagaagcactggtctaggccaagaggttattgaa
atgaaagacaaagtcggcagaccatgaggatgcagatgtgattgcactgg
actcagaaggactgcagacattctttctctgtgatgctttgtgttgtatc
cttggcttctaacaaaaacaccattctctcacaatctcatttgaactgtc
ctttgatccatgcgctatttttatgaaccagtaactactgggggtcgaat
gtatttggagaaagatcagaaagccttgagttgtgcagaagaagtggttg
caaggatttcaacactaagatagttagcctaggaatcaactatctatgag
tttcacaatagaacccggcagcatgccagctctgtgagtgagtttcttag
aaaacattgcttcactgcagatcatggccatcacagtatttaggaggtct
tgaatagatgaataatcagaaagctgttctttcctgtggaaagaactcta
ccacatcatagta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_104053516_104054363
seq2: B6Ng01-092O17.b_48_678 (reverse)

seq1  TTTAGCAAATTGTATCTTATATCTTGGGTATCCTAAGTTTCTGGGCTAAT  50
      ||| ||||||||       |||||||||||| ||| |||||| |||||||
seq2  TTTTGCAAATTG-------TATCTTGGGTATTCTAGGTTTCTAGGCTAAT  43

seq1  ATCCACTTATCAGTGAGTACATATTGCGCGAGTTCCTTTGTGATTGGGTT  100
      | |||||||||| ||||| ||| |   | |||||| ||||||||||| ||
seq2  AGCCACTTATCAATGAGTGCATGTCATGTGAGTTCTTTTGTGATTGGATT  93

seq1  ACCGCACTCAGGATGATACTCTCCAGGTCCATCCATTTGCCTAGGAATTT  150
      ||| |||||| |||||||  |||||| | || ||||||||||| ||||||
seq2  ACCTCACTCACGATGATATCCTCCAGATACAACCATTTGCCTAAGAATTT  143

seq1  CATAAATTCATTCTTTTTAATAGCTCCATTTACATTTAATTTAATTAATG  200
      |||||||||||| ||||||||| |                          
seq2  CATAAATTCATTGTTTTTAATAAC--------------------------  167

seq1  TAATTACAATTAATTAATTTATTAATTAAATAATTTAATAATTTAATTGA  250
                                                        
seq2  --------------------------------------------------  167

seq1  TAAATTAATTTAATTAATTAATTTAATTAATTAAATTAAATAATAATTTA  300
                                                        
seq2  --------------------------------------------------  167

seq1  ATAATAAATTAAATATTTTAAAATTAATAATAATTTTATAAGTAAATAAT  350
                                            | ||||      
seq2  --------------------------------------TGAGTA------  173

seq1  TTAATTAATGTAATTTAATTAATGTAATTACATTACATTTAATAGCTCCA  400
                             |||                   |||| 
seq2  -----------------------GTA-------------------CTCCG  181

seq1  TTGTGTAAATGTACCACA-TTTTCTGTATCTATTCCTCTGTTGAGGGGCA  449
      ||||||||||| |||||| |||| |||||| |||||||||||||||| ||
seq2  TTGTGTAAATGAACCACATTTTTTTGTATCCATTCCTCTGTTGAGGGACA  231

seq1  TCTGGGTTCTTTCCAGCTCCTGGCTATTATAAATAAGGCTGCTATGAATA  499
      |||||||||||||||||| |||||||||||||||| || ||||||||| |
seq2  TCTGGGTTCTTTCCAGCTTCTGGCTATTATAAATAGGGTTGCTATGAACA  281

seq1  TAGTGGAGCATGTGTCCTTCTTACCGGTTGGGGCATCTTCTGGATATATG  549
      ||||||||||||||||||| ||||| |||||  |||||||||| ||||||
seq2  TAGTGGAGCATGTGTCCTTATTACCAGTTGGAACATCTTCTGGGTATATG  331

seq1  CCCAGAAGAGGTATTGCTGGATCCTCCGGTAGTACTATGTCCAATTTTCT  599
       |||| ||||||||||||||||| || |||||||||||||||| ||||||
seq2  GCCAGGAGAGGTATTGCTGGATCTTCTGGTAGTACTATGTCCAGTTTTCT  381

seq1  GACGAACCGCCAGACGGATTTCCAGAGTGGTTGTACAAGCCTGCAATCCC  649
      || ||||| |||||| |||||||||||||||||||||||| |||||||||
seq2  GAGGAACCACCAGACTGATTTCCAGAGTGGTTGTACAAGCTTGCAATCCC  431

seq1  ACCAACAATGGAGGAGTGTTCCTCTTTCTCCACATCCTCGCCAGCATCTG  699
      |||| |||||||||||||||||||||||||||||||||||||| ||||||
seq2  ACCAGCAATGGAGGAGTGTTCCTCTTTCTCCACATCCTCGCCACCATCTG  481

seq1  CTGTCACCTGAATTTTTGATCTTAGCCATTCTGACTGGTGTGAGGTGGAA  749
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  CTGTCACCTGAATTTTTGATCCTAGCCATTCTGACTGGTGTGAGGTGGAA  531

seq1  TCTCAGGGTTGTTTTGATTTGCATTTCCCTGATGATTAAGGATGTTGAAC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGGGTTGTTTTGATTTGCATTTCCCTGATGATTAAGGATGTTGAAC  581

seq1  A-TTTTTTCAGGTGCTTCTCTGCCATTCGGTATTCCTCAGGTGAGAATTC  848
      | ||||||||  |||||||| ||| ||||||||||||||| |||||||||
seq2  ATTTTTTTCAAATGCTTCTCAGCCCTTCGGTATTCCTCAGTTGAGAATTC  631

seq1: chr19_27588075_27589142
seq2: B6Ng01-092O17.g_69_1131

seq1  GAATTCCTGTATTAAGAAATAAAGAATTCTATCTGGGCTATAAACACAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGTATTAAGAAATAAAGAATTCTATCTGGGCTATAAACACAAC  50

seq1  TCTAAGAGGAGGTATGTTGTAACTTCCTGGTGAGGACCAAACTGCTTGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAGAGGAGGTATGTTGTAACTTCCTGGTGAGGACCAAACTGCTTGCT  100

seq1  TCTAGCCCAGCGTGTAGCATCAGGCTGGGGGATGGTGTAGTAGATATCTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGCCCAGCGTGTAGCATCAGGCTGGGGGATGGTGTAGTAGATATCTA  150

seq1  CTTGACTTGGCAGTTCTGTCTGAGGCCATAGAAACTGATATAGAGAACCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGACTTGGCAGTTCTGTCTGAGGCCATAGAAACTGATATAGAGAACCC  200

seq1  TGACACCACAGATATGAGTGTGGGTATGAGTGTGCCCAGAGGTAGAACAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACACCACAGATATGAGTGTGGGTATGAGTGTGCCCAGAGGTAGAACAT  250

seq1  TGCAGGGCAGTCACAAAGTGTGACATAGGTTCCAGAAAAAAAGATTGATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGGGCAGTCACAAAGTGTGACATAGGTTCCAGAAAAAAAGATTGATA  300

seq1  CAGAAATACAGTCTTGTTTTAAGAGCAAAATCAAGATGAATTCAATAGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAATACAGTCTTGTTTTAAGAGCAAAATCAAGATGAATTCAATAGAT  350

seq1  ATAACCTGCAATGTAGTGAAACAGGCTCTCAGCCTTCCTAATGCTGTGAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACCTGCAATGTAGTGAAACAGGCTCTCAGCCTTCCTAATGCTGTGAC  400

seq1  CCTTTAATGCAGTTCCTCATGTGTGGTGATCCCCCAACCATAAATTTACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTAATGCAGTTCCTCATGTGTGGTGATCCCCCAACCATAAATTTACT  450

seq1  TCTTAACTAGTTTTGTTACTGTTATCTACTTTTATGAAACACAGTGTAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAACTAGTTTTGTTACTGTTATCTACTTTTATGAAACACAGTGTAAA  500

seq1  CATCTGATGTGCCGGATATCTGATATGTGACTCCCAAGGGGCTGGGGGGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTGATGTGCCGGATATCTGATATGTGACTCCCAAGGGGCTGGGGGGT  550

seq1  GGTCGACCCACAGGTTGAGAAGCACTGGTCTAGGCCAAGAGGTTATTGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCGACCCACAGGTTGAGAAGCACTGGTCTAGGCCAAGAGGTTATTGAA  600

seq1  ATGAAAGACAAAGTCGGCAGACCATGAGGATGCAGATGTGATTGCACTGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAAGACAAAGTCGGCAGACCATGAGGATGCAGATGTGATTGCACTGG  650

seq1  ACTCAGAAGGACTGCAGACATTCTTTCTCTGTGATGCTTTGTGTTGTATC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAGAAGGACTGCAGACATTCTTTCTCTGTGATGCTTTGTGTTGTATC  700

seq1  CTTGGCTTCTAACAAAAACACCATTCTCTCACAATCTCATTTGAACTGTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGCTTCTAACAAAAACACCATTCTCTCACAATCTCATTTGAACTGTC  750

seq1  CTTTGATCCATGCGCTATTTTTATGAACCAGTAACTACT-GGGGTCGAAT  799
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  CTTTGATCCATGCGCTATTTTTATGAACCAGTAACTACTGGGGGTCGAAT  800

seq1  GTATTTGGAGAAAGATCAGAAAGCCTTGAGTTGTGCAGAAGAAGTGGTTG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTGGAGAAAGATCAGAAAGCCTTGAGTTGTGCAGAAGAAGTGGTTG  850

seq1  CAAGGATTTCAACACTAAGATAGTTTAGCCTAGGAATCAACTATCTATGA  899
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  CAAGGATTTCAACACTAAGATAG-TTAGCCTAGGAATCAACTATCTATGA  899

seq1  GTTTCACAATAGAACCCGGCAGCATGCCAGCTCTGTTGAGTGAGTTTCCT  949
      ||||||||||||||||||||||||||||||||||| ||||||||||| ||
seq2  GTTTCACAATAGAACCCGGCAGCATGCCAGCTCTG-TGAGTGAGTTT-CT  947

seq1  TAGAAAACATTGCTTCACTGCAGAATCATGGCCATCACAGTATTTAGGAG  999
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  TAGAAAACATTGCTTCACTGCAG-ATCATGGCCATCACAGTATTTAGGAG  996

seq1  GTCCTGGATAAGATGAATAACAAGAAAGCTGTCCTTTCCTGTGGCAAG-A  1048
      ||| || || ||||||||||  |||||||||| ||||||||||| ||| |
seq2  GTCTTGAAT-AGATGAATAATCAGAAAGCTGTTCTTTCCTGTGGAAAGAA  1045

seq1  CTCTACCCACATTCATAGTA  1068
      ||||| ||||| ||||||||
seq2  CTCTA-CCACA-TCATAGTA  1063