BAC Information

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BAC

Clone NameB6Ng01-093C02
ChromosomeX (Build37)10 (Build37)
Map Location 77,476,107 - 77,477,23199,723,525 - 99,723,689
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC636082, EG667736, LOC100041373, EG636104, 2410003J06Rik, LOC667749, LOC211702, LOC667755, LOC211705, LOC654474, LOC629153
Downstream geneLOC546338, LOC100042229, LOC667776, EG629182, Tmem47, LOC100041462
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-093C02.bB6Ng01-093C02.g
ACCDH904700DH904701
length1,114184
definitionDH904700|Mus musculus domesticus DNA, BAC clone: B6Ng01-093C02, 5' end.DH904701|Mus musculus domesticus DNA, BAC clone: B6Ng01-093C02, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(77,476,107 - 77,477,231)(99,723,525 - 99,723,689)
sequence
gaattcaggcaactgtagttgattgtaaaggaaaacttaataaatattat
gagcttagatgaattttaagtagactgcaattcaaacttcactttagaag
ttcaaaaactaaatttacatagttcttgaatatcagagacaagtatagac
tcctaggtttcaatcttgaactgatgcagtggccacatgctgaggttcgc
tccttttaccacacttcctctttttttaaaattgggtattttcttatttt
acatttcaaatgctatcccaaaagtcccccataccctccccaaacccctc
ccctactcacccactcccacttcttggtcctggtgtttccatgtactgag
gcatatcaagtttgcaagaccaaggggcctctcatcctgatgatggccaa
ctaggccatcttctgctacatatgcagctagatacacgagctctgggggt
actggttagttcatattgttgttccaccaataggattgcagaccccttta
gctccttgggtacttatgaatacagaaaatgtggtacatttacacaatgg
agtactactcaggtattaaaaacaatgaatttatgaaattcctaggtaaa
tggatggaactggagagtatcatcctgagtgaggtaacccaatcccaaaa
gaactcacatgatatgtactcactgataagtggatattagcccagaaaat
tagaatacccaagatacaagttgtaaaacacatgaaactcaagaagaatg
aagaccaaagtatggttactttgccccttcttagaattgggaacaaaaca
cccatggaaagagttacatagacaaagtttggagctgagatgaaaggatg
gacgatctagagactgctgcatcctgggatccatcccataaccagccttc
aaatgcagacaccattgcatacgccagcaagattttgctgaaggaccctg
atatagctgtctcttgtgaggctatgcaggatgattctatgatcaaattc
tacttaatctcactggactctaagatagatccatccaaaatagaatgaat
gaggagagggccaattacatctggatactcatcacccaatttaccactca
tattatggttaatc
tggaaaaagtattaccagcaccctcacacttgttaagtctcatcagaatt
ctggagtagaggggaatgccagggccaggaagctggagtgggtgggttgg
ggagcagagcagagtgggatggttcaggggacttttggaggggaaactag
gaaaggggatagcatttgaaatataaatgaagaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_77476107_77477231
seq2: B6Ng01-093C02.b_43_1156

seq1  GAATTCAGGCAACTGTAGTTGATTGTAAAGGAAAACTTAATAAATATTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGCAACTGTAGTTGATTGTAAAGGAAAACTTAATAAATATTAT  50

seq1  GAGCTTAGATGAATTTTAAGTAGACTGCAATTCAAACTTCACTTTAGAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTTAGATGAATTTTAAGTAGACTGCAATTCAAACTTCACTTTAGAAG  100

seq1  TTCAAAAACTAAATTTACATAGTTCTTGAATATCAGAGACAAGTATAGAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAAAACTAAATTTACATAGTTCTTGAATATCAGAGACAAGTATAGAC  150

seq1  TCCTAGGTTTCAATCTTGAACTGATGCAGTGGCCACATGCTGAGGTTCGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAGGTTTCAATCTTGAACTGATGCAGTGGCCACATGCTGAGGTTCGC  200

seq1  TCCTTTTACCACACTTCCTCTTTTTTTAAAATTGGGTATTTTCTTATTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTTACCACACTTCCTCTTTTTTTAAAATTGGGTATTTTCTTATTTT  250

seq1  ACATTTCAAATGCTATCCCAAAAGTCCCCCATACCCTCCCCAAACCCCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTCAAATGCTATCCCAAAAGTCCCCCATACCCTCCCCAAACCCCTC  300

seq1  CCCTACTCACCCACTCCCACTTCTTGGTCCTGGTGTTTCCATGTACTGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTACTCACCCACTCCCACTTCTTGGTCCTGGTGTTTCCATGTACTGAG  350

seq1  GCATATCAAGTTTGCAAGACCAAGGGGCCTCTCATCCTGATGATGGCCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATATCAAGTTTGCAAGACCAAGGGGCCTCTCATCCTGATGATGGCCAA  400

seq1  CTAGGCCATCTTCTGCTACATATGCAGCTAGATACACGAGCTCTGGGGGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGCCATCTTCTGCTACATATGCAGCTAGATACACGAGCTCTGGGGGT  450

seq1  ACTGGTTAGTTCATATTGTTGTTCCACCAATAGGATTGCAGACCCCTTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGTTAGTTCATATTGTTGTTCCACCAATAGGATTGCAGACCCCTTTA  500

seq1  GCTCCTTGGGTACTTATGAATACAGAAAATGTGGTACATTTACACAATGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCTTGGGTACTTATGAATACAGAAAATGTGGTACATTTACACAATGG  550

seq1  AGTACTACTCAGGTATTAAAAACAATGAATTTATGAAATTCCTAGGTAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACTACTCAGGTATTAAAAACAATGAATTTATGAAATTCCTAGGTAAA  600

seq1  TGGATGGAACTGGAGAGTATCATCCTGAGTGAGGTAACCCAATCCCAAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATGGAACTGGAGAGTATCATCCTGAGTGAGGTAACCCAATCCCAAAA  650

seq1  GAACTCACATGATATGTACTCACTGATAAGTGGATATTAGCCCAGAAAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTCACATGATATGTACTCACTGATAAGTGGATATTAGCCCAGAAAAT  700

seq1  TAGAATACCCAAGATACAAGTTGTAAAACACATGAAACTCAAGAAGAATG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAATACCCAAGATACAAGTTGTAAAACACATGAAACTCAAGAAGAATG  750

seq1  AAGACCAAAGTATGGTTACTTTGCCCCTTCTTAGAATTGGGAACAAAACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACCAAAGTATGGTTACTTTGCCCCTTCTTAGAATTGGGAACAAAACA  800

seq1  CCCATGGAAAGAGTTACATAGACAAAGTTTGGAGCTGAGATGAAAGGATG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATGGAAAGAGTTACATAGACAAAGTTTGGAGCTGAGATGAAAGGATG  850

seq1  GACGATCTAGAGACTGCTGCATCCTGGGATCCATCCCATAACCAGCCTTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACGATCTAGAGACTGCTGCATCCTGGGATCCATCCCATAACCAGCCTTC  900

seq1  AAATGCAGACACCATTGCATACGCCAGCAAGATTTTGCTGAAAGGACCCT  950
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  AAATGCAGACACCATTGCATACGCCAGCAAGATTTTGCTG-AAGGACCCT  949

seq1  GATATAGCTGTCTCTTGTGAGGCTATGCAGGAATGAATTCTATGATCAAA  1000
      ||||||||||||||||||||||||||||||| ||| ||||||||||||||
seq2  GATATAGCTGTCTCTTGTGAGGCTATGCAGG-ATG-ATTCTATGATCAAA  997

seq1  TTCTACTTAATCTCACTGGACTCTAAAGATAGATCCATCAAAAATAGAAT  1050
      |||||||||||||||||||||||| |||||||||||||| ||||||||||
seq2  TTCTACTTAATCTCACTGGACTCT-AAGATAGATCCATCCAAAATAGAAT  1046

seq1  GAATGAGGGAAAAGGGCCAAATATACATCTGATAACTCATCACCCAATTT  1100
      ||||||||  | ||||||||   ||||||||   ||||||||||||||||
seq2  GAATGAGG--AGAGGGCCAA--TTACATCTGGATACTCATCACCCAATTT  1092

seq1  ACCATCTCATTTATTATGGTTAATC  1125
      |||| ||||  ||||||||||||||
seq2  ACCA-CTCA--TATTATGGTTAATC  1114

seq1: chr10_99723525_99723689
seq2: B6Ng01-093C02.g_132_256 (reverse)

seq1  TTCTTCATTTATATTTCAAATGCTAAGGAGAATTTCTGACAGCTTCTAAT  50
      ||||||||||||||||||||||||                          
seq2  TTCTTCATTTATATTTCAAATGCT--------------------------  24

seq1  GGCAGAGGAGCAGAACAGCTTTGTCATTGACCTTTTAAAGGAAAGTCCCC  100
                   | |  ||||   | |  ||  |  |   |||||||||
seq2  -------------ATCCCCTTTCCTAGTTTCCCCTCCA---AAAGTCCCC  58

seq1  TATACCCTCC--CCATGATCTGCTGCCCTACCCACCCACTTCCACTTCTT  148
      |  ||| |||  |  || |||||| ||| ||||||||||| |  |||| |
seq2  TGAACCATCCCACTCTGCTCTGCTCCCCAACCCACCCACTCCAGCTTCCT  108

seq1  GGCCCTGGCATTCCCCT  165
      |||||||||||||||||
seq2  GGCCCTGGCATTCCCCT  125