BAC Information

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BAC

Clone NameB6Ng01-093C24
Chromosome10 (Build37)
Map Location 14,444,612 - 14,621,193
singlet/doubletdoublet
Overlap geneEG666904, Nmbr
Upstream geneAig1, EG666859, Hivep2, Gpr126, LOC100039571, LOC100039409, Vta1, D230044M03Rik
Downstream geneLOC666917, LOC637043, LOC100039492, LOC671439
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-093C24.bB6Ng01-093C24.g
ACCDH904742DH904743
length1,109977
definitionDH904742|Mus musculus domesticus DNA, BAC clone: B6Ng01-093C24, 5' end.DH904743|Mus musculus domesticus DNA, BAC clone: B6Ng01-093C24, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(14,620,075 - 14,621,193)(14,444,612 - 14,445,557)
sequence
gaattctcaatagagatataaatattaactgtgaatcacttaaagaaaca
tccaacatcctaaatcatctggaaaatgcaaatctcagcaatcacttttt
cataaaggcttctgcctctatcctagggtcattcattactcagttataag
tagtaaatgaatgtctctgaatgcgtactcaaagggaagctagccaagac
gaagaaatctactgagactattccacagtgaggaagcagatgttagtcct
ctgggatgcaacctgctcagcgatgctccagctgatcacagctacaaaag
acctagttgtgtgaaggaagaaaccactgtgtatgcccaatttcttcagc
ccatcaagacttacatgaatctagctccacactcctatgactccagccac
ctgaaataaaaactgctttccaaacccactgaatctcagaactaaacatt
agaggcgacaggctgtcactttaagccactaagttatagagcattcagtt
actctgtagaaagaaattaaaatcaagcttcctctgcctgagtcagaaag
ccattggagtattctgagcagaggcaagcatgtcttcaaagaattcctca
tgtgttgtgttatttaaaaaaaaatgttaaaaacctataaaagctttgga
taatagaaggggcactgtttaaagagcagttaccctctttgcatttacca
taataccaatcacacctcaactgaaataatttctgtgacagctttttagt
ataattgtttgttctttgtgaaagcaagtagaatgttttgtttactcatg
aatgctcagtggtttcttcggcacccaaccaagtttattaaagcaaggaa
tgaaagcagcgaatgaatgctttaagggactcttgaaaggaactttcttc
tacatgtttcctagatctttgctttgatttccctttaatctactaatttc
catttctttcatcctaatgtgtggttttaaagctgattttcagtattcaa
aataatgcatgaaatggattccacccatcaacactggaaatttgatatgg
agtgatttatatttttaaatctatgtagaatccatagaaatgagaagcca
tgacagtgc
gaattctttagagggtatgtctgggatgacaaggacacatctctgctctt
ctttctatcttctttctatacttgcttggttttctaccacgttacagcat
aggatgtaggcctttgattgatgccagattcattcttttaaactaccaag
tttgtggtattatgagctcactacattgtaatttaggtaatttgtggcac
gttggtctactttttccactatggagtcctgaaaccacagatagaaccta
gacctaagtccttggatatttacctctctaagacctaagatagaacctag
acctaagtcttgtatgggacctgggagaatggagctgaatgatgcagact
taagtctcattcaatagcccactttattcagagcatcagacaatttatac
tctgtgggtcaatgagagtcacatgagtaaagtatacagtcacatggaca
agctacaggtgattgtttggtaagctgcatgaggcaaaaatgtagaagca
tataaacaaataacaatagccagttgtaatgagcaatctgaagtaaactc
atccttatttaccacgccagggagaagcaggaaagcacatttcaagaaca
agtccgaaggtagaagagaccgaggtcaataggctcctgtttgcttggag
ttttcttacaagcactcagagttcccttacagttccattctcggactgtg
gtcctacatttgtttatattatgttatttcttaaaactcatttctaaaca
tagtatctatgaagaaattttattcacaagttaggcacagtgagagtttt
ttttttttaaatataaataacttctaaccaaaatagaaaaatgtagcaag
gatcttttgataaaagttctgtgatggtgggtattatttctcaacaaaat
attgtagaggtgctcagtgctcctttacatatcggggattattcagctcc
tagatgatgggaggagttggtgggaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_14620075_14621193
seq2: B6Ng01-093C24.b_42_1150 (reverse)

seq1  GCACTGTCATGGGCTTTCTCATTTCCTATTGTATCTACAATTAGATTTAA  50
      ||||||||||||   ||||||||| |||| |  ||||||  |||||||||
seq2  GCACTGTCATGG--CTTCTCATTT-CTATGGATTCTACA--TAGATTTAA  45

seq1  AATATTAAATTCACTCCATATTCAAATTTCCAGTTGTTGAT-GGTGGAAT  99
      || ||  || |||||||||| |||||||||||| ||||||| ||||||||
seq2  AA-ATATAAATCACTCCATA-TCAAATTTCCAG-TGTTGATGGGTGGAAT  92

seq1  CCATTTTCATGCATTATTTTTGAATACTGAAAATCAGCTTTAAAACCACA  149
      ||| |||||||||||| |||||||||||||||||||||||||||||||||
seq2  CCA-TTTCATGCATTA-TTTTGAATACTGAAAATCAGCTTTAAAACCACA  140

seq1  CATTAGGATGAAAGAAATGGAAATTAGTAGATTAAAAGGGAAATCAAAAG  199
      ||||||||||||||||||||||||||||||||| ||||||||||| ||||
seq2  CATTAGGATGAAAGAAATGGAAATTAGTAGATT-AAAGGGAAATC-AAAG  188

seq1  CAAAGATCTA-GAAACATGTAGAAGAAAGTTCCTTTCAAGAGTCCCTTAA  248
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  CAAAGATCTAGGAAACATGTAGAAGAAAGTTCCTTTCAAGAGTCCCTTAA  238

seq1  AGCATTCATTCGCTGCTTTCATTCCTTGCTTTAATAAACTTGGTTGGGTG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATTCATTCGCTGCTTTCATTCCTTGCTTTAATAAACTTGGTTGGGTG  288

seq1  CCGAAGAAACCACTGAGCATTCATGAGTAAACAAAACATTCTACTTGCTT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGAAGAAACCACTGAGCATTCATGAGTAAACAAAACATTCTACTTGCTT  338

seq1  TCACAAAGAACAAACAATTATACTAAAAAGCTGTCACAGAAATTATTTCA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAAAGAACAAACAATTATACTAAAAAGCTGTCACAGAAATTATTTCA  388

seq1  GTTGAGGTGTGATTGGTATTATGGTAAATGCAAAGAGGGTAACTGCTCTT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGAGGTGTGATTGGTATTATGGTAAATGCAAAGAGGGTAACTGCTCTT  438

seq1  TAAACAGTGCCCCTTCTATTATCCAAAGCTTTTATAGGTTTTTAACATTT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACAGTGCCCCTTCTATTATCCAAAGCTTTTATAGGTTTTTAACATTT  488

seq1  TTTTTTAAATAACACAACACATGAGGAATTCTTTGAAGACATGCTTGCCT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTAAATAACACAACACATGAGGAATTCTTTGAAGACATGCTTGCCT  538

seq1  CTGCTCAGAATACTCCAATGGCTTTCTGACTCAGGCAGAGGAAGCTTGAT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTCAGAATACTCCAATGGCTTTCTGACTCAGGCAGAGGAAGCTTGAT  588

seq1  TTTAATTTCTTTCTACAGAGTAACTGAATGCTCTATAACTTAGTGGCTTA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATTTCTTTCTACAGAGTAACTGAATGCTCTATAACTTAGTGGCTTA  638

seq1  AAGTGACAGCCTGTCGCCTCTAATGTTTAGTTCTGAGATTCAGTGGGTTT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGACAGCCTGTCGCCTCTAATGTTTAGTTCTGAGATTCAGTGGGTTT  688

seq1  GGAAAGCAGTTTTTATTTCAGGTGGCTGGAGTCATAGGAGTGTGGAGCTA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAGCAGTTTTTATTTCAGGTGGCTGGAGTCATAGGAGTGTGGAGCTA  738

seq1  GATTCATGTAAGTCTTGATGGGCTGAAGAAATTGGGCATACACAGTGGTT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCATGTAAGTCTTGATGGGCTGAAGAAATTGGGCATACACAGTGGTT  788

seq1  TCTTCCTTCACACAACTAGGTCTTTTGTAGCTGTGATCAGCTGGAGCATC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCTTCACACAACTAGGTCTTTTGTAGCTGTGATCAGCTGGAGCATC  838

seq1  GCTGAGCAGGTTGCATCCCAGAGGACTAACATCTGCTTCCTCACTGTGGA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAGCAGGTTGCATCCCAGAGGACTAACATCTGCTTCCTCACTGTGGA  888

seq1  ATAGTCTCAGTAGATTTCTTCGTCTTGGCTAGCTTCCCTTTGAGTACGCA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTCTCAGTAGATTTCTTCGTCTTGGCTAGCTTCCCTTTGAGTACGCA  938

seq1  TTCAGAGACATTCATTTACTACTTATAACTGAGTAATGAATGACCCTAGG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGAGACATTCATTTACTACTTATAACTGAGTAATGAATGACCCTAGG  988

seq1  ATAGAGGCAGAAGCCTTTATGAAAAAGTGATTGCTGAGATTTGCATTTTC  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAGGCAGAAGCCTTTATGAAAAAGTGATTGCTGAGATTTGCATTTTC  1038

seq1  CAGATGATTTAGGATGTTGGATGTTTCTTTAAGTGATTCACAGTTAATAT  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATGATTTAGGATGTTGGATGTTTCTTTAAGTGATTCACAGTTAATAT  1088

seq1  TTATATCTCTATTGAGAATTC  1119
      |||||||||||||||||||||
seq2  TTATATCTCTATTGAGAATTC  1109

seq1: chr10_14444612_14445557
seq2: B6Ng01-093C24.g_68_1027

seq1  GAATTCTTTAGAGGGTATGTCTGGGATGACAAGGACACATCTCTGCTCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTAGAGGGTATGTCTGGGATGACAAGGACACATCTCTGCTCTT  50

seq1  CTTTCTATCTTCTTTCTATACTTGCTTGGTTTTCTACCACGTTACAGCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTATCTTCTTTCTATACTTGCTTGGTTTTCTACCACGTTACAGCAT  100

seq1  AGGATGTAGGCCTTTGATTGATGCCAGATTCATTCTTTTAAACTACCAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATGTAGGCCTTTGATTGATGCCAGATTCATTCTTTTAAACTACCAAG  150

seq1  TTTGTGGTATTATGAGCTCACTACATTGTAATTTAGGTAATTTGTGGCAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGGTATTATGAGCTCACTACATTGTAATTTAGGTAATTTGTGGCAC  200

seq1  GTTGGTCTACTTTTTCCACTATGGAGTCCTGAAACCACAGATAGAACCTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGTCTACTTTTTCCACTATGGAGTCCTGAAACCACAGATAGAACCTA  250

seq1  GACCTAAGTCCTTGGATATTTACCTCTCTAAGACCTAAGATAGAACCTAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTAAGTCCTTGGATATTTACCTCTCTAAGACCTAAGATAGAACCTAG  300

seq1  ACCTAAGTCTTGTATGGGACCTGGGAGAATGGAGCTGAATGATGCAGACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTAAGTCTTGTATGGGACCTGGGAGAATGGAGCTGAATGATGCAGACT  350

seq1  TAAGTCTCATTCAATAGCCCACTTTATTCAGAGCATCAGACAATTTATAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTCTCATTCAATAGCCCACTTTATTCAGAGCATCAGACAATTTATAC  400

seq1  TCTGTGGGTCAATGAGAGTCACATGAGTAAAGTATACAGTCACATGGACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGGGTCAATGAGAGTCACATGAGTAAAGTATACAGTCACATGGACA  450

seq1  AGCTACAGGTGATTGTTTGGTAAGCTGCATGAGGCAAAAATGTAGAAGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTACAGGTGATTGTTTGGTAAGCTGCATGAGGCAAAAATGTAGAAGCA  500

seq1  TATAAACAAATAACAATAGCCAGTTGTAATGAGCAATCTGAAGTAAACTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAACAAATAACAATAGCCAGTTGTAATGAGCAATCTGAAGTAAACTC  550

seq1  ATCCTTATTTACCACGCCAGGGAGAAGCAGGAAAGCACATTTCAAGAACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTTATTTACCACGCCAGGGAGAAGCAGGAAAGCACATTTCAAGAACA  600

seq1  AGTCCGAAGGTAGAAGAGACCGAGGTCAATAGGCTCCTGTTTGCTTGGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCGAAGGTAGAAGAGACCGAGGTCAATAGGCTCCTGTTTGCTTGGAG  650

seq1  TTTTCTTACAAGCACTCAGAGTTCCCTTACAGTTCCATTCTCGGACTGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTACAAGCACTCAGAGTTCCCTTACAGTTCCATTCTCGGACTGTG  700

seq1  GTCCTACATTTG-TTATATTATGTTATTTCTT-AAACTCATTTCTAAACA  748
      |||||||||||| ||||||||||||||||||| |||||||||||||||||
seq2  GTCCTACATTTGTTTATATTATGTTATTTCTTAAAACTCATTTCTAAACA  750

seq1  TAGTATCTATGAAGAAATTTAATTCACAAGTTAGGCACAGTGAGAGTTTT  798
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  TAGTATCTATGAAGAAATTTTATTCACAAGTTAGGCACAGTGAGAGTTTT  800

seq1  TTTTTTT--AATAT-AATAACTTCTAACC-AAATAG-AAAATGTAGCAA-  842
      |||||||  ||||| |||||||||||||| |||||| |||||||||||| 
seq2  TTTTTTTTAAATATAAATAACTTCTAACCAAAATAGAAAAATGTAGCAAG  850

seq1  GATCTTTTGATAAAAGTTCTGTGAT-GTGGTTATTATTTCTC-ACAAAAT  890
      ||||||||||||||||||||||||| |||| ||||||||||| |||||||
seq2  GATCTTTTGATAAAAGTTCTGTGATGGTGGGTATTATTTCTCAACAAAAT  900

seq1  A-TGTAGA-GTGCTCAGTGCT-CTTTACATATC-GGGATAATTCAGCTCC  936
      | |||||| |||||||||||| ||||||||||| ||||| ||||||||||
seq2  ATTGTAGAGGTGCTCAGTGCTCCTTTACATATCGGGGATTATTCAGCTCC  950

seq1  TAGATGATGG  946
      ||||||||||
seq2  TAGATGATGG  960