BAC Information

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BAC

Clone NameB6Ng01-093J10
Chromosome10 (Build37)
Map Location 49,396,286 - 49,488,602
singlet/doubletdoublet
Overlap geneGrik2
Upstream geneLOC546562, LOC100041689
Downstream geneLOC629652, Ascc3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-093J10.bB6Ng01-093J10.g
ACCDH905034DH905035
length1,1671,130
definitionDH905034|Mus musculus domesticus DNA, BAC clone: B6Ng01-093J10, 5' end.DH905035|Mus musculus domesticus DNA, BAC clone: B6Ng01-093J10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(49,487,423 - 49,488,602)(49,396,286 - 49,397,418)
sequence
gaattcttcttttaaatagagaatctatttgttcaattaacttgagattt
tatttttaaaagttgtgggtattaaagcttcacaagtgtctagtaaagtg
acacaaaatgcaatgtctggattcagtgtttgagacagacgagtacttac
gattgtggagaggagattgcaaccaaggtctcagtttgcccacagaagtg
cattcagtgtgaatacaatagagctgccatggccaacctgatcatgtgaa
agaaggtgaatttacatgtagttcctgtagaatctacaatctcagcacag
acgttttcctttctatttcaataaggcaggaatttttgagaggtgttgct
aggcacactgtgccttctgaatgcccactcctctatatttattaggaatt
cttttaatcctttcagtttttttttcaagcttagtatttcctcattttct
ggtacacaaatataatgaatttaaacactgtatcctttcttaagtcatag
aacaacagaattctccttcgattattgtcccatgtattagctctccagaa
acatttttaaattagagagcacacaactgtcagcaatctactttttcaga
aactagaaaagcctcagaaagtgtggctcgaaaattgtgcttctgagacc
agctctatcactttgagacaagttaatcaaaccttgagtaacagctttcc
tgagaaataaaattaatcaccactgacatatgtgtttgttctagtattat
acaaaaacaaaatctcttctttttggaaaaaaagtctaaattccctgttt
ttttgtttgttgtttgtttgtttgtttgcttttttggggttttttttttt
tttttgcacttctgaaatttggggttgaaggagcttttgaacagcaagta
gctctgtatttctgcagagcagcctgcctgtcaggtctggtctacgtgtt
tattgactactagcttcagctctggtgcagctgagatacaaatcagcctt
gggctttatccacagatctgagaggaggaaggcaagcagcacctgtatat
atggcatgatgagctgcagctgaattgcataagtgcattagactttctgt
gctacttggatttgggaatggctggaggaatcggagagtataggcaatag
ttaacaatggttctcct
gaattccaaggtcctaaaagagcagtaatttatctcacacagtgagtcag
cagcaaccagcaccttacctgacaggcaaccagtgaaatcaataaggatt
tgttacatttaattttctcatatataattggttctaaagtggtctcacct
ttgaagtgaaaattaaagtataatagctttgaaacaggattattcagccc
ttcaacaattattagaaaggccagtattgttatgtgcacataaaaaccac
ctaattgcctaaatgtttcaattctaaagcatatacagtgacagataggg
agaaaattactgctgtcttccaccttttgtgttatgcagtatttaatgga
tcaaaaataatagatgttaatgtgagccatggagcatcataataaaactc
ttaccacttaccatttacttaaatcctggaattctcaccaccctctaatc
cctgcaatgcctccttgtggagggctcatcctgatgtttgttttacctta
ctctctcctttttagatataagtgcatcatgtcttgaagtattaattaat
aagacaaagttcagagtttaagtctatgtaagccttagtatattgagatg
gtgccccatgctgtttctatgatttgtgggtttctttccatttttgattc
tgcaatacatctttctttaagctgtaatgaactcataacaatttccaagg
aataaggctacattgtatataatataattttaccttttggggcttgggga
aattttcaagcataaattttctactggatgtctcagaagaaacttagcca
taatcttaatggaaaatttttaaaaataaactcagtggttgaaaaatagc
taacataagaaacaataatagtacgtgtttgagcatagaagcaaataaat
tcacctttatccattatcaaacacacattgtctctttgaagcaaataaat
tttatgttctctgtacaggagcaccctatggagctatatgtaagtagcta
tatatacggtattatgacccacctttagaaaaggacatatatggcaaacc
catagtattgtttcacacaaaggaaatggatggactttgcaggcatacat
gaaatgtatatgttaagccggtcaatcagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_49487423_49488602
seq2: B6Ng01-093J10.b_43_1209 (reverse)

seq1  AGGAGAAACATGTTGTAAACTATTGCCTATTACCTCCAGAATCACTCCAG  50
      ||||||| ||  |||| |||||||||||||   |||| || || ||||||
seq2  AGGAGAACCA--TTGTTAACTATTGCCTATACTCTCC-GATTC-CTCCAG  46

seq1  -CAATACCAAATCCAAGTAGCACAGAAAAGTCCTAATGCAC-TATGCAAT  98
       || | ||||||||||||||||||| ||||| ||||||||| ||||||||
seq2  CCATTCCCAAATCCAAGTAGCACAG-AAAGT-CTAATGCACTTATGCAAT  94

seq1  TCAGCTGCAGCTCATCACTGCCAATATAATTACAGGTGCCTGCCTGCCTT  148
      ||||||||||||||||| |||| |||||  |||||||| |||| ||||||
seq2  TCAGCTGCAGCTCATCA-TGCC-ATATA--TACAGGTG-CTGCTTGCCTT  139

seq1  CCTCCTCTCAGATCTGTGGATAAAAGCCCAAGGCTGAATTTGTATCTCAG  198
      ||||||||||||||||||||| |||||||||||||| |||||||||||||
seq2  CCTCCTCTCAGATCTGTGGAT-AAAGCCCAAGGCTG-ATTTGTATCTCAG  187

seq1  CTGCACAGAAGCTGAAGCTAGTAGTCAATAAACACGTAGAACAGAACCTG  248
      ||||||   ||||||||||||||||||||||||||||||| ||| |||||
seq2  CTGCACCAGAGCTGAAGCTAGTAGTCAATAAACACGTAGACCAG-ACCTG  236

seq1  ACAGGCAGGCTGCTCTTGCAG-AATACAGAGCTACTTGCTGTTCAAAAGC  297
      ||||||||||||||| ||||| ||||||||||||||||||||||||||||
seq2  ACAGGCAGGCTGCTC-TGCAGAAATACAGAGCTACTTGCTGTTCAAAAGC  285

seq1  TCCTTCAACCCCAAATTTTCAGAAGTGC-AAAAAAAAAAAAAAACCCCAA  346
      ||||||||||||||| |||||||||||| |||||||||||||||||||||
seq2  TCCTTCAACCCCAAA-TTTCAGAAGTGCAAAAAAAAAAAAAAAACCCCAA  334

seq1  AAAAGCAAACAAACAAACAAACAAACAAACAAAAAAACAGGGAATTTAGA  396
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  AAAAGCAAACAAACAAACAAAC-AACAAACAAAAAAACAGGGAATTTAGA  383

seq1  CTTTTTTTCCAAAAAGAAGAGATTTTGTTTTTGTATAATACTAGAACAAA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTTTCCAAAAAGAAGAGATTTTGTTTTTGTATAATACTAGAACAAA  433

seq1  CACATATGTCAGTGGTGATTAATTTTATTTCTCAGGAAAGCTGTTACTCA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATATGTCAGTGGTGATTAATTTTATTTCTCAGGAAAGCTGTTACTCA  483

seq1  AGGTTTGATTAACTTGTCTCAAAGTGATAGAGCTGGTCTCAGAAGCACAA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTTGATTAACTTGTCTCAAAGTGATAGAGCTGGTCTCAGAAGCACAA  533

seq1  TTTTCGAGCCACACTTTCTGAGGCTTTTCTAGTTTCTGAAAAAGTAGATT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCGAGCCACACTTTCTGAGGCTTTTCTAGTTTCTGAAAAAGTAGATT  583

seq1  GCTGACAGTTGTGTGCTCTCTAATTTAAAAATGTTTCTGGAGAGCTAATA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGACAGTTGTGTGCTCTCTAATTTAAAAATGTTTCTGGAGAGCTAATA  633

seq1  CATGGGACAATAATCGAAGGAGAATTCTGTTGTTCTATGACTTAAGAAAG  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGGACAATAATCGAAGGAGAATTCTGTTGTTCTATGACTTAAGAAAG  683

seq1  GATACAGTGTTTAAATTCATTATATTTGTGTACCAGAAAATGAGGAAATA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACAGTGTTTAAATTCATTATATTTGTGTACCAGAAAATGAGGAAATA  733

seq1  CTAAGCTTGAAAAAAAAACTGAAAGGATTAAAAGAATTCCTAATAAATAT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGCTTGAAAAAAAAACTGAAAGGATTAAAAGAATTCCTAATAAATAT  783

seq1  AGAGGAGTGGGCATTCAGAAGGCACAGTGTGCCTAGCAACACCTCTCAAA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGAGTGGGCATTCAGAAGGCACAGTGTGCCTAGCAACACCTCTCAAA  833

seq1  AATTCCTGCCTTATTGAAATAGAAAGGAAAACGTCTGTGCTGAGATTGTA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCCTGCCTTATTGAAATAGAAAGGAAAACGTCTGTGCTGAGATTGTA  883

seq1  GATTCTACAGGAACTACATGTAAATTCACCTTCTTTCACATGATCAGGTT  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCTACAGGAACTACATGTAAATTCACCTTCTTTCACATGATCAGGTT  933

seq1  GGCCATGGCAGCTCTATTGTATTCACACTGAATGCACTTCTGTGGGCAAA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCATGGCAGCTCTATTGTATTCACACTGAATGCACTTCTGTGGGCAAA  983

seq1  CTGAGACCTTGGTTGCAATCTCCTCTCCACAATCGTAAGTACTCGTCTGT  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGACCTTGGTTGCAATCTCCTCTCCACAATCGTAAGTACTCGTCTGT  1033

seq1  CTCAAACACTGAATCCAGACATTGCATTTTGTGTCACTTTACTAGACACT  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAACACTGAATCCAGACATTGCATTTTGTGTCACTTTACTAGACACT  1083

seq1  TGTGAAGCTTTAATACCCACAACTTTTAAAAATAAAATCTCAAGTTAATT  1146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAAGCTTTAATACCCACAACTTTTAAAAATAAAATCTCAAGTTAATT  1133

seq1  GAACAAATAGATTCTCTATTTAAAAGAAGAATTC  1180
      ||||||||||||||||||||||||||||||||||
seq2  GAACAAATAGATTCTCTATTTAAAAGAAGAATTC  1167

seq1: chr10_49396286_49397418
seq2: B6Ng01-093J10.g_69_1198

seq1  GAATTCCAAGGTCCTAAAAGAGCAGTAATTTATCTCACACAGTGAGTCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAGGTCCTAAAAGAGCAGTAATTTATCTCACACAGTGAGTCAG  50

seq1  CAGCAACCAGCACCTTACCTGACAGGCAACCAGTGAAATCAATAAGGATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAACCAGCACCTTACCTGACAGGCAACCAGTGAAATCAATAAGGATT  100

seq1  TGTTACATTTAATTTTCTCATATATAATTGGTTCTAAAGTGGTCTCACCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTACATTTAATTTTCTCATATATAATTGGTTCTAAAGTGGTCTCACCT  150

seq1  TTGAAGTGAAAATTAAAGTATAATAGCTTTGAAACAGGATTATTCAGCCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAGTGAAAATTAAAGTATAATAGCTTTGAAACAGGATTATTCAGCCC  200

seq1  TTCAACAATTATTAGAAAGGCCAGTATTGTTATGTGCACATAAAAACCAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAACAATTATTAGAAAGGCCAGTATTGTTATGTGCACATAAAAACCAC  250

seq1  CTAATTGCCTAAATGTTTCAATTCTAAAGCATATACAGTGACAGATAGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATTGCCTAAATGTTTCAATTCTAAAGCATATACAGTGACAGATAGGG  300

seq1  AGAAAATTACTGCTGTCTTCCACCTTTTGTGTTATGCAGTATTTAATGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAATTACTGCTGTCTTCCACCTTTTGTGTTATGCAGTATTTAATGGA  350

seq1  TCAAAAATAATAGATGTTAATGTGAGCCATGGAGCATCATAATAAAACTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAAATAATAGATGTTAATGTGAGCCATGGAGCATCATAATAAAACTC  400

seq1  TTACCACTTACCATTTACTTAAATCCTGGAATTCTCACCACCCTCTAATC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCACTTACCATTTACTTAAATCCTGGAATTCTCACCACCCTCTAATC  450

seq1  CCTGCAATGCCTCCTTGTGGAGGGCTCATCCTGATGTTTGTTTTACCTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCAATGCCTCCTTGTGGAGGGCTCATCCTGATGTTTGTTTTACCTTA  500

seq1  CTCTCTCCTTTTTAGATATAAGTGCATCATGTCTTGAAGTATTAATTAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCCTTTTTAGATATAAGTGCATCATGTCTTGAAGTATTAATTAAT  550

seq1  AAGACAAAGTTCAGAGTTTAAGTCTATGTAAGCCTTAGTATATTGAGATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACAAAGTTCAGAGTTTAAGTCTATGTAAGCCTTAGTATATTGAGATG  600

seq1  GTGCCCCATGCTGTTTCTATGATTTGTGGGTTTCTTTCCATTTTTGATTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCCCATGCTGTTTCTATGATTTGTGGGTTTCTTTCCATTTTTGATTC  650

seq1  TGCAATACATCTTTCTTTAAGCTGTAATGAACTCATAACAATTTCCAAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAATACATCTTTCTTTAAGCTGTAATGAACTCATAACAATTTCCAAGG  700

seq1  AATAAGGCTACATTGTATATAATATAATTTTACCTTTTGGGGCTTGGGGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAGGCTACATTGTATATAATATAATTTTACCTTTTGGGGCTTGGGGA  750

seq1  AATTTTCAAGCATAAATTTTCTACTGGATGTCTCAGAAGAAACTTAGCCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTCAAGCATAAATTTTCTACTGGATGTCTCAGAAGAAACTTAGCCA  800

seq1  TAATCTTAATGGAAAATTTTTAAAAATAAACTCAGTGGTTGAAAAATAGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCTTAATGGAAAATTTTTAAAAATAAACTCAGTGGTTGAAAAATAGC  850

seq1  TAACATAAGAAACAATAATAGTACGTGTTTGAGCATAGAAGCAAATAAAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACATAAGAAACAATAATAGTACGTGTTTGAGCATAGAAGCAAATAAAT  900

seq1  TCACCTTTATCCATTATCAAACACACATTGTCTCTTTGAAGCAAATTAAA  950
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  TCACCTTTATCCATTATCAAACACACATTGTCTCTTTGAAGCAAA-TAAA  949

seq1  TTTTATGTTCTCTGTACAGGAGCAACCTAT-GAGCTATATGTAAGTAGCT  999
      |||||||||||||||||||||||| ||||| |||||||||||||||||||
seq2  TTTTATGTTCTCTGTACAGGAGCACCCTATGGAGCTATATGTAAGTAGCT  999

seq1  ATATATACGGTTAATATGAACACACCTTTAGAAAA-GACATATATTGCAA  1048
      |||||||||| || |||| || ||||||||||||| ||||||||| ||||
seq2  ATATATACGG-TATTATG-ACCCACCTTTAGAAAAGGACATATATGGCAA  1047

seq1  ACCCATAGTAATGTTTCACACAAAGGAAATTGAATTGGACTTTGCAAGCA  1098
      |||||||||| ||||||||||||||||||| ||  ||||||||||| |||
seq2  ACCCATAGTATTGTTTCACACAAAGGAAATGGA--TGGACTTTGCAGGCA  1095

seq1  TAACATGAAATG-ATATGTAAAGCAGTCAAATCAGT  1133
      | |||||||||| |||||| |||| |   |||||||
seq2  T-ACATGAAATGTATATGTTAAGCCGGTCAATCAGT  1130