BAC Information

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BAC

Clone NameB6Ng01-094C21
Chromosome10 (Build37)
Map Location 108,264,157 - 108,375,304
singlet/doubletdoublet
Overlap geneSyt1
Upstream geneEG628870, Ppp1r12a, Pawr, EG667814, EG368203
Downstream geneNav3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-094C21.bB6Ng01-094C21.g
ACCDH905467DH905468
length1,086379
definitionDH905467|Mus musculus domesticus DNA, BAC clone: B6Ng01-094C21, 5' end.DH905468|Mus musculus domesticus DNA, BAC clone: B6Ng01-094C21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(108,264,157 - 108,265,252)(108,374,920 - 108,375,304)
sequence
gaattctcaacaaaatggtactttggaggtgaggaagaaagcctgcctgt
cacccttagcttcatagtgcttgttgatttagctcacttctaggcctagg
agaccatcaaaggctttgagcctccttctgaatactatgaaagggagcca
cactatagttccatgtcaaagactgacatttgctttaaggaggaagagaa
tttcagcctgcctctagccccttctttcttccttcattgctcccttcttc
tttaccccctccagaagtgtaaaagttatgcaactctaaaagcatgctcc
tttgatatttccaagggagactttaataacacttataaaaagtactattt
actgatgctgttgtatgaacatctacagtaagcagttaatgaatgggcct
tgccattctcctataaaacctataaaataaatattactttttctttggta
gaggagactggggaggagtttgcactctggttttggagacagggaaccag
caagtgggagaaatggaacttgagtggcatacgcatttatagttacaaag
gaaaacgattctggccaatagtgagctgcagcaggcagaggggtgagtag
acctgaatgacagagggtcaaaactggttattcagaggctgtgctgtttc
ctttaacctctgtgactttgaactttacacatgcattttaaacacagcag
tatctgaaaaagtttcccctatatatttccatagaaacacctgcatgttt
ctgaatcacgaaagactaagcttttcacgacaaaagaaaatacagatggc
aggacaaataaaagaataaatgttcatttctagaaacaggctagattctt
ttcaagtagtcatcataagaaaagaaattctgaagtggactgtgctaagt
gtagcgccttgaagacagcagactcatgatcactagtgctcagtggaggt
ttgagacacggagaggtatacgacatgctctagatagcagagtaatgaga
ggcagctggatttgaaccagataatttctccaaacatagtatctacaaaa
catggtccagacacttctctgggtgtttcaaaaaaa
agaagcaaagggtgtttatggcccattttgctaagaacctgtggcaatta
taaagtcttccttgggaaatttatttttctgaatccaggtcttactatgc
ttctctagctagtctggaactcacattgcaaaccaggctgcctcagaatc
atagagatcttcctgcttctgcctcccttgtgctgggattcaagacttag
ggaattgccatagctttattaaagtgtttaatatttcagtatttctacaa
tacagaaaactattagaaaaaaaacttttaaaaaatgtaagaaaagcaaa
ccagataattctctgaaagttacatatctttattagtggtcgtggtggtg
gtggtggtaatggtagtagtatttcttta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_108264157_108265252
seq2: B6Ng01-094C21.b_46_1131

seq1  GAATTCTCAACAAAATGGTACTTTGGAGGTGAGGAAGAAAGCCTGCCTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAACAAAATGGTACTTTGGAGGTGAGGAAGAAAGCCTGCCTGT  50

seq1  CACCCTTAGCTTCATAGTGCTTGTTGATTTAGCTCACTTCTAGGCCTAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCTTAGCTTCATAGTGCTTGTTGATTTAGCTCACTTCTAGGCCTAGG  100

seq1  AGACCATCAAAGGCTTTGAGCCTCCTTCTGAATACTATGAAAGGGAGCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCATCAAAGGCTTTGAGCCTCCTTCTGAATACTATGAAAGGGAGCCA  150

seq1  CACTATAGTTCCATGTCAAAGACTGACATTTGCTTTAAGGAGGAAGAGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTATAGTTCCATGTCAAAGACTGACATTTGCTTTAAGGAGGAAGAGAA  200

seq1  TTTCAGCCTGCCTCTAGCCCCTTCTTTCTTCCTTCATTGCTCCCTTCTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGCCTGCCTCTAGCCCCTTCTTTCTTCCTTCATTGCTCCCTTCTTC  250

seq1  TTTACCCCCTCCAGAAGTGTAAAAGTTATGCAACTCTAAAAGCATGCTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACCCCCTCCAGAAGTGTAAAAGTTATGCAACTCTAAAAGCATGCTCC  300

seq1  TTTGATATTTCCAAGGGAGACTTTAATAACACTTATAAAAAGTACTATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGATATTTCCAAGGGAGACTTTAATAACACTTATAAAAAGTACTATTT  350

seq1  ACTGATGCTGTTGTATGAACATCTACAGTAAGCAGTTAATGAATGGGCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGATGCTGTTGTATGAACATCTACAGTAAGCAGTTAATGAATGGGCCT  400

seq1  TGCCATTCTCCTATAAAACCTATAAAATAAATATTACTTTTTCTTTGGTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCATTCTCCTATAAAACCTATAAAATAAATATTACTTTTTCTTTGGTA  450

seq1  GAGGAGACTGGGGAGGAGTTTGCACTCTGGTTTTGGAGACAGGGAACCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAGACTGGGGAGGAGTTTGCACTCTGGTTTTGGAGACAGGGAACCAG  500

seq1  CAAGTGGGAGAAATGGAACTTGAGTGGCATACGCATTTATAGTTACAAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTGGGAGAAATGGAACTTGAGTGGCATACGCATTTATAGTTACAAAG  550

seq1  GAAAACGATTCTGGCCAATAGTGAGCTGCAGCAGGCAGAGGGGTGAGTAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAACGATTCTGGCCAATAGTGAGCTGCAGCAGGCAGAGGGGTGAGTAG  600

seq1  ACCTGAATGACAGAGGGTCAAAACTGGTTATTCAGAGGCTGTGCTGTTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGAATGACAGAGGGTCAAAACTGGTTATTCAGAGGCTGTGCTGTTTC  650

seq1  CTTTAACCTCTGTGACTTTGAACTTTACACATGCATTTTAAACACAGCAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAACCTCTGTGACTTTGAACTTTACACATGCATTTTAAACACAGCAG  700

seq1  TATCTGAAAAAGTTTCCCCTATATATTTCCATAGAAACACCTGCATGTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTGAAAAAGTTTCCCCTATATATTTCCATAGAAACACCTGCATGTTT  750

seq1  CTGAATCACGAAAGACTAAGCTTTTCAGGACAAAAGAAAATACAGATGGC  800
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  CTGAATCACGAAAGACTAAGCTTTTCACGACAAAAGAAAATACAGATGGC  800

seq1  AGGACAAATAAAAGAATAAATGTTCATTTCTAGAAACAGGCTAGATTCTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACAAATAAAAGAATAAATGTTCATTTCTAGAAACAGGCTAGATTCTT  850

seq1  TTCAAGTAGTCATCATAAGAAAAGAAATTCTGAAGTGGACTGTGCTAAGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAGTAGTCATCATAAGAAAAGAAATTCTGAAGTGGACTGTGCTAAGT  900

seq1  GTAGCGCCTTGAAGACAGCAGACTCAATGATCACTAGTGCTCAGTGGAGG  950
      ||||||||||||||||||||||||| |||||||||||||||||||||| |
seq2  GTAGCGCCTTGAAGACAGCAGACTC-ATGATCACTAGTGCTCAGTGGA-G  948

seq1  GTTTGAGACACGGAGAGGTATACGACATTGCTCTAGATAGCAGAGGTAAT  1000
      ||||||||||||||||||||||||||| |||||||||||||||| |||||
seq2  GTTTGAGACACGGAGAGGTATACGACA-TGCTCTAGATAGCAGA-GTAAT  996

seq1  GAAGGAGGCAGCTGGAATTTGAACCCAGATAATTTCTCCAAACATAGTTA  1050
      ||  ||||||||||| ||||||| ||||||||||||||||||||||| ||
seq2  GA--GAGGCAGCTGG-ATTTGAA-CCAGATAATTTCTCCAAACATAG-TA  1041

seq1  TCTACAAAACATGGTCCAAGACAACTTCTCT-GGTGTTTCAAAAAAA  1096
      ||||||||||||||||| |||| |||||||| |||||||||||||||
seq2  TCTACAAAACATGGTCC-AGAC-ACTTCTCTGGGTGTTTCAAAAAAA  1086

seq1: chr10_108374920_108375304
seq2: B6Ng01-094C21.g_67_451 (reverse)

seq1  TAAAGAAATACTACTACCATTACCACCACCACCACCACGACCACTAATAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGAAATACTACTACCATTACCACCACCACCACCACGACCACTAATAA  50

seq1  AGATATGTAACTTTCAGAGAATTATCTGGTTTGCTTTTCTTACATTTTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATATGTAACTTTCAGAGAATTATCTGGTTTGCTTTTCTTACATTTTTT  100

seq1  AAAAGTTTTTTTTCTAATAGTTTTCTGTATTGTAGAAATACTGAAATATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTTTTTTTTCTAATAGTTTTCTGTATTGTAGAAATACTGAAATATT  150

seq1  AAACACTTTAATAAAGCTATGGCAATTCCCTAAGTCTTGAATCCCAGCAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACACTTTAATAAAGCTATGGCAATTCCCTAAGTCTTGAATCCCAGCAC  200

seq1  AAGGGAGGCAGAAGCAGGAAGATCTCTATGATTCTGAGGCAGCCTGGTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGAGGCAGAAGCAGGAAGATCTCTATGATTCTGAGGCAGCCTGGTTT  250

seq1  GCAATGTGAGTTCCAGACTAGCTAGAGAAGCATAGTAAGACCTGGATTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATGTGAGTTCCAGACTAGCTAGAGAAGCATAGTAAGACCTGGATTCA  300

seq1  GAAAAATAAATTTCCCAAGGAAGACTTTATAATTGCCACAGGTTCTTAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAATAAATTTCCCAAGGAAGACTTTATAATTGCCACAGGTTCTTAGC  350

seq1  AAAATGGGCCATAAACACCCTTTGCTTCTGAATTC  385
      |||||||||||||||||||||||||||||||||||
seq2  AAAATGGGCCATAAACACCCTTTGCTTCTGAATTC  385