BAC Information

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BAC

Clone NameB6Ng01-094G10
Chromosome10 (Build37)
Map Location 19,896,320 - 20,073,337
singlet/doubletdoublet
Overlap geneMtap7, EG621697, Bclaf1, 2610016C23Rik
Upstream geneEG637620, Olig3, Ifngr1, Il22ra2, Il20ra, Slc35d3, Pex7, Map3k5
Downstream geneLOC382344, Pde7b, LOC667202, Ahi1, Myb, LOC100039870, Hbs1l
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-094G10.bB6Ng01-094G10.g
ACCDH905635DH905636
length1,1371,180
definitionDH905635|Mus musculus domesticus DNA, BAC clone: B6Ng01-094G10, 5' end.DH905636|Mus musculus domesticus DNA, BAC clone: B6Ng01-094G10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(19,896,320 - 19,897,467)(20,072,144 - 20,073,337)
sequence
gaattctaagaagggttgggagcattagaactgcccttcaaggtcactct
tgagagtgtctgctctgtaaggttgctccactccgcactgcagcactgca
ttcatgtaattataccctgggattttgctccattttgctgttttctgatt
ctgtgttgaaaatgaaggcatatacttgcctggtgtagcggctattttgt
ttcaagattttgctcagattaagttgtagcaaaataaaatctccccttga
aatggtggttctacaaaactgctgctgttaagctgcgtttacagaacttt
ttccccagtcactgtcgagggagagcctctgctgctgaaggtctgagaag
agaatgtgaaacgccctttgctgtgtgtgccctgtctgtctgtccatccg
gcaggtgatggtcaactgtaacgcccacccactaagtggtcagtgtttgc
tcccagaggcctgggacctggcctgtgagcagcagtctgctccttacacc
ccctgcctccctcttcctttctgctggaggacctgaccactgactgtttc
caacgtcctaagcagttctagtaaggaagtactcggtatcaaattgattg
gcaccactttcatctacttaggagaccctaaatgtaatctttattcaaaa
tacttgataaaaagtgttggcacgagcagacaacatctgatctatagctt
tctctttgtcgagtctctaaacctttgtgaagcaggtgacttgagttgtc
tcccgggctttctgtgttagggagaaagtcactgcatgtcattgcataca
ggagaatgtgctcagcccgtatataatcaatatattttacagacagataa
aatgaaatggcttgcaatggaaaacaggcttaaatagtggttaacaggta
actgttcaaattctaggaaccgagcacgattaaccaatggctcagcactt
agaacgctagtctgcttggattgacctcttagtctactaatatcagtgct
tcaaggaataactttaatttgttgttccaggagtattccaggtgagttgc
tgacacttcctcaaatttcattttgttttgcttaattggtttgtagcttt
ttgtctgtggctagtggttatggagacaagaacttac
gaattcaagttttaggctacacccatgtcccaaggcaaacagatagaatt
accgaaatctgagacaactggcttcttcatcatttgccacacataaaacg
tcagcaaaagatggaaccctaagttcataatcatcagactccgtagagtt
cacatgcgggatcaactacaacaaaaataaaaacaaagtcagaaccccat
agagactcagggaaaacacaggacccatgtttcatcatagtaaataagtt
aacggtctaaaccagaaaagggaaaaacagatatgtaaaaaaaaaaaaaa
aaaaaaaaaagctggagcaatgttcttcttccacccgagggagtagccat
gtcttctcctcacggctaatctcatccatcacacggccacacagggaaaa
cacaaagtcagataaaaacaagctccaggcctgctttgtactgacttgga
atacaattaaagaaacaatgtgagataatttatgtgtagaagtaaacctt
ggcttacaggcacatttcttccttcgtccttctatcctgtatcctgggag
cacctaaattactttatacacagggcttaaataaggcatggtgactaact
cacctcaaaatgaggtcttctgcaaggttttaaaggaagccttctcccaa
taatacgaacaatactccgagctgacccacagtttttattttgacaaatc
agcaaatcctataaataaagctttgtttaaaatacatgccagttaagtat
gcttatatatctaagaaaataaaaagatgtaacagatgtagtaaccttta
tttctacaaagaaaactttaacagcatatacttaaaagtattcttaaaga
attaaaccttattgacatttatcttgaaaaacactaaagtatgaggttag
aaaatagtcaaagttgaccatagacacattagatcccaatagatatccag
accccacgtagagacgctggcatggtgtagtctcaaagctgaggagacag
gagatcagcggattccttcagctgatggccttctctcattcccttttcag
gaggtttcaaagaaggtactgatacattccctcctcaccacaggtccttt
cgagactgtccatcaccctatcctccaccccagaaatccttctagaccac
tttacccagacgcaccaaggaggcggcagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_19896320_19897467
seq2: B6Ng01-094G10.b_45_1181

seq1  GAATTCTAAGAAGGGTTGGGAGCATTAGAACTGCCCTTCAAGGTCACTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAAGAAGGGTTGGGAGCATTAGAACTGCCCTTCAAGGTCACTCT  50

seq1  TGAGAGTGTCTGCTCTGTAAGGTTGCTCCACTCCGCACTGCAGCACTGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAGTGTCTGCTCTGTAAGGTTGCTCCACTCCGCACTGCAGCACTGCA  100

seq1  TTCATGTAATTATACCCTGGGATTTTGCTCCATTTTGCTGTTTTCTGATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATGTAATTATACCCTGGGATTTTGCTCCATTTTGCTGTTTTCTGATT  150

seq1  CTGTGTTGAAAATGAAGGCATATACTTGCCTGGTGTAGCGGCTATTTTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTTGAAAATGAAGGCATATACTTGCCTGGTGTAGCGGCTATTTTGT  200

seq1  TTCAAGATTTTGCTCAGATTAAGTTGTAGCAAAATAAAATCTCCCCTTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAGATTTTGCTCAGATTAAGTTGTAGCAAAATAAAATCTCCCCTTGA  250

seq1  AATGGTGGTTCTACAAAACTGCTGCTGTTAAGCTGCGTTTACAGAACTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGTGGTTCTACAAAACTGCTGCTGTTAAGCTGCGTTTACAGAACTTT  300

seq1  TTCCCCAGTCACTGTCGAGGGAGAGCCTCTGCTGCTGAAGGTCTGAGAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCCAGTCACTGTCGAGGGAGAGCCTCTGCTGCTGAAGGTCTGAGAAG  350

seq1  AGAATGTGAAACGCCCTTTGCTGTGTGTGCCCTGTCTGTCTGTCCATCCG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATGTGAAACGCCCTTTGCTGTGTGTGCCCTGTCTGTCTGTCCATCCG  400

seq1  GCAGGTGATGGTCAACTGTAACGCCCACCCACTAAGTGGTCAGTGTTTGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGTGATGGTCAACTGTAACGCCCACCCACTAAGTGGTCAGTGTTTGC  450

seq1  TCCCAGAGGCCTGGGACCTGGCCTGTGAGCAGCAGTCTGCTCCTTACACC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGAGGCCTGGGACCTGGCCTGTGAGCAGCAGTCTGCTCCTTACACC  500

seq1  CCCTGCCTCCCTCTTCCTTTCTGCTGGAGGACCTGACCACTGACTGTTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGCCTCCCTCTTCCTTTCTGCTGGAGGACCTGACCACTGACTGTTTC  550

seq1  CAACGTCCTAAGCAGTTCTAGTAAGGAAGTACTCGGTATCAAATTGATTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACGTCCTAAGCAGTTCTAGTAAGGAAGTACTCGGTATCAAATTGATTG  600

seq1  GCACCACTTTCATCTACTTAGGAGACCCTAAATGTAATCTTTATTCAAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACCACTTTCATCTACTTAGGAGACCCTAAATGTAATCTTTATTCAAAA  650

seq1  TACTTGATAAAAAGTGTTGGCACGAGCAGACAACATCTGATCTATAGCTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTGATAAAAAGTGTTGGCACGAGCAGACAACATCTGATCTATAGCTT  700

seq1  TCTCTTTGTCGAGTCTCTAAACCTTTGTGAAGCAGGTGACTTGAGTTGTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTTGTCGAGTCTCTAAACCTTTGTGAAGCAGGTGACTTGAGTTGTC  750

seq1  TCCCGGGCTTTCTGTGTTAGGGAGAAAGTCACTGCATGTCATTGCATACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCGGGCTTTCTGTGTTAGGGAGAAAGTCACTGCATGTCATTGCATACA  800

seq1  GGAGAATGTGCTCAGCCCGTATATAATCAATATATTTTACAGACAGATAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAATGTGCTCAGCCCGTATATAATCAATATATTTTACAGACAGATAA  850

seq1  AATGAAATGGCTTGCAATGGAAAACAGGCTTAAATAGTGGTTAACAGGTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAAATGGCTTGCAATGGAAAACAGGCTTAAATAGTGGTTAACAGGTA  900

seq1  ACTGTTCAAATTCTAGGAACCGAGCACGATTAACCAATGGCTCAGCACTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTTCAAATTCTAGGAACCGAGCACGATTAACCAATGGCTCAGCACTT  950

seq1  AGAAGGCTAGTCTGCTTGGATTGACCTCTTAGGTCTACTAATATCAGTGC  1000
      |||| |||||||||||||||||||||||||| ||||||||||||||||||
seq2  AGAACGCTAGTCTGCTTGGATTGACCTCTTA-GTCTACTAATATCAGTGC  999

seq1  TTCAAGGAATAACTTTAATTTGTTGTTTCCAGGAAGTATTCCAGGTGAGT  1050
      ||||||||||||||||||||||||| ||||||| ||||||||||||||||
seq2  TTCAAGGAATAACTTTAATTTGTTG-TTCCAGG-AGTATTCCAGGTGAGT  1047

seq1  TGCTGACACCTTCCTCATATTTCATTTTTTGTTTTTGCTTATTTGGTTTT  1100
      |||||||| |||||||| ||||||||||    ||||||||| |||| |||
seq2  TGCTGACA-CTTCCTCAAATTTCATTTT---GTTTTGCTTAATTGG-TTT  1092

seq1  GTAGCTTTTTGTCTGTGTGCTAGTTTGTTTATTGAGACAAGAACTTAC  1148
      ||||||||||||||||| |||||  || |||| |||||||||||||||
seq2  GTAGCTTTTTGTCTGTG-GCTAG--TGGTTATGGAGACAAGAACTTAC  1137

seq1: chr10_20072144_20073337
seq2: B6Ng01-094G10.g_67_1246 (reverse)

seq1  CCTGCCGCCTCCTAGGTGCTGCTGGGTTTAAAGGTGTGTCTAGAAAGGAT  50
      ||||||||||||| |||||  ||||||   || ||| |||||| ||||||
seq2  CCTGCCGCCTCCTTGGTGCGTCTGGGT---AAAGTG-GTCTAG-AAGGAT  45

seq1  TTCTGTGGGTGGA-GATAGGGTTGATTGGGACAGTCT--GAAGGACCTGT  97
      ||||| ||||||| ||||||| ||||  |||||||||   ||||||||||
seq2  TTCTG-GGGTGGAGGATAGGG-TGAT--GGACAGTCTCGAAAGGACCTGT  91

seq1  GGTGAGGAAGGGAAATGGTATCAGTAACCTTCTTTTGAAAACTCTGGAAA  147
      ||||||| ||||||   |||||||| |||||| ||||||| |||  ||||
seq2  GGTGAGG-AGGGAA--TGTATCAGT-ACCTTC-TTTGAAACCTCCTGAAA  136

seq1  AGAGATTGAGAG-AGGCCATCAGCTGGAAGGAATCCGCTGATCT-CTGTC  195
      || || |||||| |||||||||||| |||||||||||||||||| |||||
seq2  AGGGAATGAGAGAAGGCCATCAGCT-GAAGGAATCCGCTGATCTCCTGTC  185

seq1  TCCTCAGCTTTGAGACTACACCATGCCAGCGTCTCTACGTGGGGTCTGGA  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCAGCTTTGAGACTACACCATGCCAGCGTCTCTACGTGGGGTCTGGA  235

seq1  TATTCTATTTGGGATCTAATGTGTCTATGGTCAACTTTGACTATTTTTCT  295
      || |||| ||||||||||||||||||||||||||||||||||| ||||||
seq2  TA-TCTA-TTGGGATCTAATGTGTCTATGGTCAACTTTGACTA-TTTTCT  282

seq1  AACCTCATACTTTAGTGTTTTTTCAAGATAAATGTCAATAAGGTTTAATT  345
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  AACCTCATACTTTAGTG-TTTTTCAAGATAAATGTCAATAAGGTTTAATT  331

seq1  CTTTAAGAATACTTTTAAGTATATGCTGTTAAAGTTTTCTTTGTAGAAAT  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAAGAATACTTTTAAGTATATGCTGTTAAAGTTTTCTTTGTAGAAAT  381

seq1  AAAGGTTACTACATCTGTTACATCTTTTTATTTTCTTAGATATATAAGCA  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGTTACTACATCTGTTACATCTTTTTATTTTCTTAGATATATAAGCA  431

seq1  TACTTAACTGGCATGTATTTTAAACAAAGCTTTATTTATAGGATTTGCTG  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTAACTGGCATGTATTTTAAACAAAGCTTTATTTATAGGATTTGCTG  481

seq1  ATTTGTCAAAATAAAAACTGTGGGTCAGCTCGGAGTATTGTTCGTATTAT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTCAAAATAAAAACTGTGGGTCAGCTCGGAGTATTGTTCGTATTAT  531

seq1  TGGGAGAAGGCTTCCTTTAAAACCTTGCAGAAGACCTCATTTTGAGGTGA  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAGAAGGCTTCCTTTAAAACCTTGCAGAAGACCTCATTTTGAGGTGA  581

seq1  GTTAGTCACCATGCCTTATTTAAGCCCTGTGTATAAAGTAATTTAGGTGC  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGTCACCATGCCTTATTTAAGCCCTGTGTATAAAGTAATTTAGGTGC  631

seq1  TCCCAGGATACAGGATAGAAGGACGAAGGAAGAAATGTGCCTGTAAGCCA  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGGATACAGGATAGAAGGACGAAGGAAGAAATGTGCCTGTAAGCCA  681

seq1  AGGTTTACTTCTACACATAAATTATCTCACATTGTTTCTTTAATTGTATT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTTACTTCTACACATAAATTATCTCACATTGTTTCTTTAATTGTATT  731

seq1  CCAAGTCAGTACAAAGGATGCCTGGAGCTTGTTTTTATCTGACTTTGTGT  795
      |||||||||||||||| | |||||||||||||||||||||||||||||||
seq2  CCAAGTCAGTACAAAGCAGGCCTGGAGCTTGTTTTTATCTGACTTTGTGT  781

seq1  TTTCCCTGTGTGGCCGTGTGATGGATGAGATTAGCCGTGAGGAGAAGACA  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCCTGTGTGGCCGTGTGATGGATGAGATTAGCCGTGAGGAGAAGACA  831

seq1  TGGCTACTCCCTCGGGTGGAAGAAGAACATTGCTCCAGCTTTTTTTTTTT  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTACTCCCTCGGGTGGAAGAAGAACATTGCTCCAGCTTTTTTTTTTT  881

seq1  TTTTTTTTTTTTTACATATCTGTTTTTCCCTTTTCTGGTTTAGACCGTTA  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTTTTACATATCTGTTTTTCCCTTTTCTGGTTTAGACCGTTA  931

seq1  ACTTATTTACTATGATGAAACATGGGTCCTGTGTTTTCCCTGAGTCTCTA  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTATTTACTATGATGAAACATGGGTCCTGTGTTTTCCCTGAGTCTCTA  981

seq1  TGGGGTTCTGACTTTGTTTTTATTTTTGTTGTAGTTGATCCCGCATGTGA  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGTTCTGACTTTGTTTTTATTTTTGTTGTAGTTGATCCCGCATGTGA  1031

seq1  ACTCTACGGAGTCTGATGATTATGAACTTAGGGTTCCATCTTTTGCTGAC  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTACGGAGTCTGATGATTATGAACTTAGGGTTCCATCTTTTGCTGAC  1081

seq1  GTTTTATGTGTGGCAAATGATGAAGAAGCCAGTTGTCTCAGATTTCGGTA  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTATGTGTGGCAAATGATGAAGAAGCCAGTTGTCTCAGATTTCGGTA  1131

seq1  ATTCTATCTGTTTGCCTTGGGACATGGGTGTAGCCTAAAACTTGAATTC  1194
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTATCTGTTTGCCTTGGGACATGGGTGTAGCCTAAAACTTGAATTC  1180