BAC Information

Click to search

BAC

Clone NameB6Ng01-095O22
Chromosome10 (Build37)
Map Location 49,100,749 - 49,218,404
singlet/doubletdoublet
Overlap geneGrik2
Upstream geneLOC546562, LOC100041689
Downstream geneLOC629652
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-095O22.bB6Ng01-095O22.g
ACCDH906736DH906737
length1,207281
definitionDH906736|Mus musculus domesticus DNA, BAC clone: B6Ng01-095O22, 5' end.DH906737|Mus musculus domesticus DNA, BAC clone: B6Ng01-095O22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(49,100,749 - 49,101,971)(49,218,124 - 49,218,404)
sequence
gaattccttgcttcatgttaatgttaaatgtaaatttggttcaaaatgac
ataatatagaataaaacaagtaggtcaataactgcaaatgaaattgtaaa
aggttttatgtcatctttaaggggaaactgtttcataatatgattttttt
aaatgaattctaatcttaagacaaatggactattatcatgtacagtaaaa
cttcacatagcagttcctcagtttttattttagttgacattcttaaaata
aataaatagcgaatgtccaacaatagtataactacagtgtagacaccact
gaatatccttcaacacaatggtcaaacaataactagaagttcattgaaat
atgtttccactataataaaattttatttatattaggattaaacaatttta
ttatgttatttagctttttgtttgtttgtttgtttgtttgtttgtttttg
agacaaggttgctctgtgtatccctggctattctgatgccagagtgacct
caaaataagtgatccacctgcctctgtctactaagcactgtgattaaact
catatgttatcatgcctggcacacaatttatttttgaaaaatttacttca
tttatcaaaggtaaaactataaaaattaatcgaaataaaatttccatact
tgtagtatgaaaagtacaaagtaagagcaatcagtgtccttacactatgg
aagaaagattctatggacactgttagatggggatttcttacaaaatatgt
ttataaaagcataatttttgaaaattgatttctattgtttacccagaatc
aaaattatgaaaataaaaaatggtgcatgtattttacaagattactgatg
tcaccagtcaccatcaacaccagagaggaaatttgttatgttttttagac
tgaatataaagagaagcatcaactctgaaaggttaattacagatgatgca
tgggaggggcacataaacgaaaggtcaagatctcagaaaaggaaaactgt
gtttatgatttcagctcctgatttccttcagttcacttggataccctaag
tagcttttctaacgtcactgcccagttgcctcatcaattgacacctggca
tagagaagtaacaatctgttcagcagcacaaagccatgaatcaacttgct
ggaacgaaatgtattggctgaatcctattcctaactattaccatgacaca
tgctttt
atttttattacatgaaaacttgagtgattcttgtcaaattccttggttct
tgagataagggtgtgaaataatagatatgagaaaatatgtataataccct
ttaatatttctgtgggcttgaattgtgtttccaaaatagaaatcgcaaag
gggaaaaaaaaagaatctgagtgaaaatgttgctattttttggggggtgg
gggtaagtgagtctattggggaaagcactaaaacggggttctcttttgtt
tgtttggggtgttgtttgggtttgctttatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_49100749_49101971
seq2: B6Ng01-095O22.b_50_1256

seq1  GAATTCCTTGCTTCATGTTAATGTTAAATGTAAATTTGGTTCAAAATGAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTGCTTCATGTTAATGTTAAATGTAAATTTGGTTCAAAATGAC  50

seq1  ATAATATAGAATAAAACAAGTAGGTCAATAACTGCAAATGAAATTGTAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATATAGAATAAAACAAGTAGGTCAATAACTGCAAATGAAATTGTAAA  100

seq1  AGGTTTTATGTCATCTTTAAGGGGAAACTGTTTCATAATATGATTTTTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTTTATGTCATCTTTAAGGGGAAACTGTTTCATAATATGATTTTTTT  150

seq1  AAATGAATTCTAATCTTAAGACAAATGGACTATTATCATGTACAGTAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGAATTCTAATCTTAAGACAAATGGACTATTATCATGTACAGTAAAA  200

seq1  CTTCACATAGCAGTTCCTCAGTTTTTATTTTAGTTGACATTCTTAAAATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCACATAGCAGTTCCTCAGTTTTTATTTTAGTTGACATTCTTAAAATA  250

seq1  AATAAATAGCGAATGTCCAACAATAGTATAACTACAGTGTAGACACCACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAATAGCGAATGTCCAACAATAGTATAACTACAGTGTAGACACCACT  300

seq1  GAATATCCTTCAACACAATGGTCAAACAATAACTAGAAGTTCATTGAAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATATCCTTCAACACAATGGTCAAACAATAACTAGAAGTTCATTGAAAT  350

seq1  ATGTTTCCACTATAATAAAATTTTATTTATATTAGGATTAAACAATTTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTCCACTATAATAAAATTTTATTTATATTAGGATTAAACAATTTTA  400

seq1  TTATGTTATTTAGCTTTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGTTATTTAGCTTTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTTTG  450

seq1  AGACAAGGTTGCTCTGTGTATCCCTGGCTATTCTGATGCCAGAGTGACCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAAGGTTGCTCTGTGTATCCCTGGCTATTCTGATGCCAGAGTGACCT  500

seq1  CAAAATAAGTGATCCACCTGCCTCTGTCTACTAAGCACTGTGATTAAACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATAAGTGATCCACCTGCCTCTGTCTACTAAGCACTGTGATTAAACT  550

seq1  CATATGTTATCATGCCTGGCACACAATTTATTTTTGAAAAATTTACTTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATGTTATCATGCCTGGCACACAATTTATTTTTGAAAAATTTACTTCA  600

seq1  TTTATCAAAGGTAAAACTATAAAAATTAATCGAAATAAAATTTCCATACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATCAAAGGTAAAACTATAAAAATTAATCGAAATAAAATTTCCATACT  650

seq1  TGTAGTATGAAAAGTACAAAGTAAGAGCAATCAGTGTCCTTACACTATGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGTATGAAAAGTACAAAGTAAGAGCAATCAGTGTCCTTACACTATGG  700

seq1  AAGAAAGATTCTATGGACACTGTTAGATGGGGATTTCTTACAAAATATGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAGATTCTATGGACACTGTTAGATGGGGATTTCTTACAAAATATGT  750

seq1  TTATAAAAGCATAATTTTTGAAAATTGATTTCTATTGTTTACCCAGAATC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAAAAGCATAATTTTTGAAAATTGATTTCTATTGTTTACCCAGAATC  800

seq1  AAAATTATGAAAATAAAAAATGGTGCATGTATTTTACAAGATTACTGATG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTATGAAAATAAAAAATGGTGCATGTATTTTACAAGATTACTGATG  850

seq1  TCACCAGTCACCATCAACACCAGAGAGGAAATTTGTTATGTTTTTTAGAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCAGTCACCATCAACACCAGAGAGGAAATTTGTTATGTTTTTTAGAC  900

seq1  TGAATATAAAGAGAAGCATCAACTCTGAAAAGGTTAATTACAGATGATGC  950
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  TGAATATAAAGAGAAGCATCAACTCTG-AAAGGTTAATTACAGATGATGC  949

seq1  ATGGGAGGGGCACATAAAACGAAGGGTCAAGATCTTCAGAAAAGGAAATA  1000
      ||||||||||||||| ||||||| |||||||||| ||||||||||||| |
seq2  ATGGGAGGGGCACAT-AAACGAAAGGTCAAGATC-TCAGAAAAGGAAA-A  996

seq1  CTGTGTTTTATGATTTCAGCTCCTGATTTCCTTCAGGTCCAACTTGGGGA  1050
      ||||| |||||||||||||||||||||||||||||| ||  ||||  |||
seq2  CTGTG-TTTATGATTTCAGCTCCTGATTTCCTTCAGTTC--ACTT--GGA  1041

seq1  TACCCTAAGTAGCTTTTCTAACGTCACTGCCCAGTTTGCCTCATCAATAT  1100
      |||||||||||||||||||||||||||||||||| ||||||||||||| |
seq2  TACCCTAAGTAGCTTTTCTAACGTCACTGCCCAG-TTGCCTCATCAAT-T  1089

seq1  GACACCTGGCATAGGAGAGTAGCCATCTG-TCAGCCAGGCACAAAGCCAT  1149
      ||||||||||||||   |||| | ||||| |||||   ||||||||||||
seq2  GACACCTGGCATAGAGAAGTAACAATCTGTTCAGC--AGCACAAAGCCAT  1137

seq1  GATCAAACTTGTTTGAACAGAATGTATT-GCTGAGAATCTCATATCCTAA  1198
      ||   |||||| | ||||  |||||||| |||  |||||  || ||||||
seq2  GAATCAACTTGCTGGAACGAAATGTATTGGCT--GAATCCTAT-TCCTAA  1184

seq1  CTATTAACAATGACCACATGCTTTT  1223
      ||||| || |||| |||||||||||
seq2  CTATT-ACCATGA-CACATGCTTTT  1207

seq1: chr10_49218124_49218404
seq2: B6Ng01-095O22.g_76_356 (reverse)

seq1  AATAAAGCAAACCCAAACAACACCCCAAACAAACAAAAGAGAACCCTGTT  50
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  AATAAAGCAAACCCAAACAACACCCCAAACAAACAAAAGAGAACCCCGTT  50

seq1  TTAGTGCTTTCCCCAATAGACTCACTTACCCCCACCCCCCAAAAAATAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTGCTTTCCCCAATAGACTCACTTACCCCCACCCCCCAAAAAATAGC  100

seq1  AACATTTTCACTCAGATTCTTTTTTTTTCCCCTTTGCGATTTCTATTTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTTTCACTCAGATTCTTTTTTTTTCCCCTTTGCGATTTCTATTTTG  150

seq1  GAAACACAATTCAAGCCCACAGAAATATTAAAGGGTATTATACATATTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACACAATTCAAGCCCACAGAAATATTAAAGGGTATTATACATATTTT  200

seq1  CTCATATCTATTATTTCACACCCTTATCTCAAGAACCAAGGAATTTGACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATATCTATTATTTCACACCCTTATCTCAAGAACCAAGGAATTTGACA  250

seq1  AGAATCACTCAAGTTTTCATGTAATAAAAAT  281
      |||||||||||||||||||||||||||||||
seq2  AGAATCACTCAAGTTTTCATGTAATAAAAAT  281