BAC Information

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BAC

Clone NameB6Ng01-096D16
Chromosome10 (Build37)
Map Location 106,204,028 - 106,205,208
singlet/doubletsinglet
Overlap genePpfia2
Upstream geneBC067068, Ccdc59, EG667758, EG639162, Olfr1556-ps1
Downstream gene8430416H19Rik, Lin7a, Myf5, Myf6, Ptprq, EG628870
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-096D16.bB6Ng01-096D16.g
ACCDH906947DH906948
length8021,164
definitionDH906947|Mus musculus domesticus DNA, BAC clone: B6Ng01-096D16, 5' end.DH906948|Mus musculus domesticus DNA, BAC clone: B6Ng01-096D16, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttaagctctgtaccccatttttaatggggttatttgaatt
tctggagtccagcttctttacaaattaaaatacaattacatcatttctcc
accctgttttttaacctgcaagccctctggtgctctaacactcaaattca
tgacttcattatttttgagataggaaagacaattacatttcttttttact
gcttctaaaaccttcctaatactcttcttcactctttttttagttcatcg
cttctttttaccattaattgttttatatgaatatatgtgtcttcatatgg
attcctacatataagctggtgagtctctatgttggtacttgtatctatga
tttcaggattgactattgtggatagccctgaagctaattatatttgatgt
taattctgttctcctgtgagtggctgtggacaaggaatgagtcagcactc
actcaggtgatttcctgtaaacctgctccccaccttaatttgtaaaataa
aggagagctgatgattaggcagctaaaagggaaggtggagcagaaggtga
gagggaaataaggagataatggaagagggagagaggatgcagaagaggaa
ggataaggagaaaagctgagcagaagcacatggcctggagaaaccgaaag
ttctaaggggtctcataagctgtggaagatggtagtgtagcagtacatct
gccctatctagatgcacagcatgtaatggtatttattgtgttgtgttttc
attgccagggcaattctgggttggagagatttatcccaacacaatgttgg
tc

gaattcaaaatatccttaacactttgcagtccctcaaaaaattcaagtca
gttttcagtctccaagagctcttcacttttaaacaaatcacttttgaagt
aaggcactaaaggccaaaataaaattcacttatttttaagatctattctg
cctattttctttcttaatcgctgatgatttacagtattctggttatgctt
ttagctctgcctcttcttagtatgaatcagaaattgtagcaaactcaatt
cacaacactgttggaagatctatccattcacatgccaaaggattttctac
aaggatgttccttgaaacaatgatgcttttgaggtgacagtgtttccaag
ttgttcttgccaggtttaagatcatcctgagattttagggttacaaatgc
ttaaagattatgacctttggtttctgatgttaatgatggcttcagcacaa
tttcctatatttggaatgtacattactgcacatattttgatttttcttct
aggtaagggagcgactgagggtttctttagaaagagtctctgcactggaa
gaggaactagctgcagctaatcaggaggtaacacaccaccctctcctcct
tggaggcccactcttactaacatgctggcccttgtgttacacgttgcttt
cattaaatctgtcactaaatcaattatgttctatctgtgctgatgaatga
tgcccacttaaatgagttgccagaggcctgtttgctgatgtctggctgtt
cagatctgtcaccagaagaccaaataaaagccaccaagggttagtgagat
agttagaaacaccatccttgataaaatagcacagaaactggaatttgtgt
taagtacctattaaacattgaaaatacaagaaatgaagaaaatctgtaca
cagatgtacacatttatacattttccctcagattcttcctatttatccac
ctcgcaaaacagtgtgcccacacttatggcacgctgattagcatctttgt
aaaatcaaagagactgtttaaaggcatggctttagattcagagtgagacc
ccatcagttcataatgctcagatctattgcatgtccacagctttgtgagt
tcatacgtgcattgtgctgcgttgttgaagaacgtcctcctgaatggatc
gagaagctatttcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_106204028_106205208
seq2: B6Ng01-096D16.g_67_1230

seq1  GAATTCAAAATATCCTTAACACTTTGCAGTCCCTCAAAAAATTCAAGTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAATATCCTTAACACTTTGCAGTCCCTCAAAAAATTCAAGTCA  50

seq1  GTTTTCAGTCTCCAAGAGCTCTTCACTTTTAAACAAATCACTTTTGAAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCAGTCTCCAAGAGCTCTTCACTTTTAAACAAATCACTTTTGAAGT  100

seq1  AAGGCACTAAAGGCCAAAATAAAATTCACTTATTTTTAAGATCTATTCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCACTAAAGGCCAAAATAAAATTCACTTATTTTTAAGATCTATTCTG  150

seq1  CCTATTTTCTTTCTTAATCGCTGATGATTTACAGTATTCTGGTTATGCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATTTTCTTTCTTAATCGCTGATGATTTACAGTATTCTGGTTATGCTT  200

seq1  TTAGCTCTGCCTCTTCTTAGTATGAATCAGAAATTGTAGCAAACTCAATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCTCTGCCTCTTCTTAGTATGAATCAGAAATTGTAGCAAACTCAATT  250

seq1  CACAACACTGTTGGAAGATCTATCCATTCACATGCCAAAGGATTTTCTAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAACACTGTTGGAAGATCTATCCATTCACATGCCAAAGGATTTTCTAC  300

seq1  AAGGATGTTCCTTGAAACAATGATGCTTTTGAGGTGACAGTGTTTCCAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGATGTTCCTTGAAACAATGATGCTTTTGAGGTGACAGTGTTTCCAAG  350

seq1  TTGTTCTTGCCAGGTTTAAGATCATCCTGAGATTTTAGGGTTACAAATGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTCTTGCCAGGTTTAAGATCATCCTGAGATTTTAGGGTTACAAATGC  400

seq1  TTAAAGATTATGACCTTTGGTTTCTGATGTTAATGATGGCTTCAGCACAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGATTATGACCTTTGGTTTCTGATGTTAATGATGGCTTCAGCACAA  450

seq1  TTTCCTATATTTGGAATGTACATTACTGCACATATTTTGATTTTTCTTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTATATTTGGAATGTACATTACTGCACATATTTTGATTTTTCTTCT  500

seq1  AGGTAAGGGAGCGACTGAGGGTTTCTTTAGAAAGAGTCTCTGCACTGGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAAGGGAGCGACTGAGGGTTTCTTTAGAAAGAGTCTCTGCACTGGAA  550

seq1  GAGGAACTAGCTGCAGCTAATCAGGAGGTAACACACCACCCTCTCCTCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAACTAGCTGCAGCTAATCAGGAGGTAACACACCACCCTCTCCTCCT  600

seq1  TGGAGGCCCACTCTTACTAACATGCTGGCCCTTGTGTTACACGTTGCTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGGCCCACTCTTACTAACATGCTGGCCCTTGTGTTACACGTTGCTTT  650

seq1  CATTAAATCTGTCACTAAATCAATTATGTTCTATCTGTGCTGATGAATGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAAATCTGTCACTAAATCAATTATGTTCTATCTGTGCTGATGAATGA  700

seq1  TGCCCACTTAAATGAGTTGCCAGAGGCCTGTTTGCTGATGTCTGGCTGTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCACTTAAATGAGTTGCCAGAGGCCTGTTTGCTGATGTCTGGCTGTT  750

seq1  CAGATCTGTCACCAGAAGACCAAATAAAAGCCACCAAGGGTTAGTGAGAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATCTGTCACCAGAAGACCAAATAAAAGCCACCAAGGGTTAGTGAGAT  800

seq1  AGTTAGAAACACCATCCTTGATAAAATAGCACAGAAACTGGAATTTGTGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAGAAACACCATCCTTGATAAAATAGCACAGAAACTGGAATTTGTGT  850

seq1  TAAGTACCTATTAAACATTGAAAATACAAGAAATGAAGAAAATCTGTACA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTACCTATTAAACATTGAAAATACAAGAAATGAAGAAAATCTGTACA  900

seq1  CAGATGTACACATTTATACATTTTCCCTCAGATTCTTCCTATTTATCCAC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATGTACACATTTATACATTTTCCCTCAGATTCTTCCTATTTATCCAC  950

seq1  CTCGCAAAACAGTGTGCCCACACCTTATGGCACCGCTGAATTAGCATCTT  1000
      |||||||||||||||||||||| ||||||||| ||||| |||||||||||
seq2  CTCGCAAAACAGTGTGCCCACA-CTTATGGCA-CGCTG-ATTAGCATCTT  997

seq1  TGTAAAAATCAAAGAGACTGTTTAAAGGCATGGCTTTAAGATTCAAAGAG  1050
      ||| ||||||||||||||||||||||||||||||||| ||||||  ||||
seq2  TGT-AAAATCAAAGAGACTGTTTAAAGGCATGGCTTT-AGATTC--AGAG  1043

seq1  TGAGACCCCCATCAGGTTCATACATGCTCAGATCTATTGCATGTTCCCAC  1100
      ||||| |||||||| ||||||| |||||||||||||||||||||  ||||
seq2  TGAGA-CCCCATCA-GTTCATA-ATGCTCAGATCTATTGCATGT--CCAC  1088

seq1  AGCCTCTGTGAGTTCATACGTGCATTGTGCTTGCTGTGTTTGAAGACGTG  1150
      || || |||||||||||||||||||||||| ||| ||  |||||||   |
seq2  AG-CTTTGTGAGTTCATACGTGCATTGTGC-TGC-GTTGTTGAAGA-ACG  1134

seq1  TCTCCCTGATGTGATCCGAGAAGCTATTTCC  1181
      ||  |||||   ||| |||||||||||||||
seq2  TCCTCCTGAATGGAT-CGAGAAGCTATTTCC  1164


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