BAC Information

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BAC

Clone NameB6Ng01-096F15
Chromosome10 (Build37)
Map Location 76,760,379 - 76,890,698
singlet/doubletdoublet
Overlap geneAdarb1
Upstream geneDip2a, Pcnt, 2610028H24Rik, A130042E20Rik, Mcm3ap, Lss, 1700027D21Rik, Ftcd, Col6a2, Col6a1, Pcbp3, LOC100041099, Slc19a1, Col18a1, LOC665762, Pofut2
Downstream gene1810008A18Rik, Itgb2, Pttg1ip, Sumo3, Ube2g2, LOC674243, LOC670895, Krtap12-1, A030009A09Rik, LOC100041250, LOC100041261, LOC634517, LOC100041281, LOC634504, LOC675294, LOC670880, LOC100040299, LOC675238, C330046G03Rik, EG544710, LOC100041351, 1700009J07Rik, Lrrc3, Trpm2, 1810043G02Rik, Pfkl, Aire, Dnmt3l, Icosl, D10Jhu81e, Pwp2, Tmem1, Agpat3, LOC100041500, Rrp1, Cstb
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-096F15.bB6Ng01-096F15.g
ACCDH907029DH907030
length1,142569
definitionDH907029|Mus musculus domesticus DNA, BAC clone: B6Ng01-096F15, 5' end.DH907030|Mus musculus domesticus DNA, BAC clone: B6Ng01-096F15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(76,889,536 - 76,890,698)(76,760,379 - 76,760,953)
sequence
gaattcttgaaagcaaaaaataggtgggctgatgtatgtatgtatgggac
tccaacagatatgcacagactgtaaatgctctcatctctctggaatgtgg
ccctggaaccagtgagacagagggaagctggccctgatcctgggcctgca
cgggctgtggctctctaaatcctctcccaggcaggcctggttgtcctctc
ctcaccatggggacatctgggggctctcccctactcccacctgcgatctg
acagtgcaagtgggaacctcccctgcatagtcttgttgacatacaggtta
gtagctctagtgcatgctcctgtggtgctcagcattggacaggtggggat
attatcccctttagatccaaatcttttaaatactgacctccatcacaggt
aagaagggtgtctgggacccggtttaggtagaaagaatgacttccattta
gaaatctggcttatatgtttcgatttttttaatgtactttgtttgaaatc
attttcctttgacaaaattgtaacttctctgatgaggaatctgaaaactg
aggagggactactgtctagcgagtgacctattttcatccctgtcagagat
acctgcaatggtttcatagaaaatgagacttgacggcctcatctcctagg
cctagctacagcatcatcaggatacagcacacaggaagggagtgcctagc
aaccagaccacaatcggtccaagaggaagccccaaggcttctccatcact
ctaaggcctccacagtagcccatgaagccagactttgggtggatagccaa
gcagagaggttcctgactagaaattctgggctatctttacagttagtttt
aggttggcttattcctgacatgcaaggctggcttaacctttgaacgtcat
caatagatggactcaaggcgcttttgaaatgtatcattatctttatttct
tacatgtgtaaaatatctccgtagaagtttatgaacgcactaaagaacat
ttaaataaacgtagaaatagcagcagtgtggtgtgtatgtttatcctagt
actcggtagcaagcagcagatctttgtagattagccagctggtctaagag
cagtcacagacactgggtctatactgagaaccctgctctgaa
aaccaaacattgaagaaaacgtatcaacctgaaacaaactcttccagaaa
acagatgggagagagttgaatattaactctttttttttttttgcctgaca
aagatactaactacagtagccttgcagcacagcgtagaacaccagcaatc
ccaacactcaggaggctgaggcaggaggatcgaggcaagagttccaggtc
aacctgggctacacagtaaggcctgttaagaaagtaacgggaggaagagg
gagtggtagagagggaaaggagagagaagagcctttacacactctctaga
gcttttcaaaacacagttctggtcccagacatgactacctataaagaaaa
aaatggtgaggtcagacattagaagaacgggcactgctctaaaggaaagt
ctcaccgctgtccgcacgaacaactggcccagtgctacccacccgggcag
ggttcttgtcaattagtatgcgtgctgatcgtacccggcttcctaactgc
taagacggcttcctgacctgtgtgaaggaaaatgatcttgtgcaaggttg
ctgctctgctggacaactc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_76889536_76890698
seq2: B6Ng01-096F15.b_48_1189 (reverse)

seq1  TTCAGAGGCAGGGTTTCTCTGTATAGCCCCAGATGTCTGTGACTTACTCT  50
      |||||| |||||| ||||| |||||| ||||| |||||||||| | ||||
seq2  TTCAGA-GCAGGG-TTCTCAGTATAGACCCAG-TGTCTGTGAC-TGCTCT  46

seq1  GTAGACCAGACTGGCCTTAATCTTACAAAGATCTGCCTGCCTCTGCCTAC  100
       |||||||| |||||  ||||| |||||||||||| |||   ||  ||||
seq2  -TAGACCAG-CTGGC--TAATC-TACAAAGATCTG-CTG---CTTGCTAC  87

seq1  CGAGTACTAGGATTAAACATACACACCACCACCTGGCTTGCT--TATTTC  148
      |||||||||||| ||||||||||||||| |||      ||||  ||||||
seq2  CGAGTACTAGGA-TAAACATACACACCA-CAC------TGCTGCTATTTC  129

seq1  TACGTTTATTTAAATGTTCTTTAGTTGCGTTCATAAACTTCTACGGAGAT  198
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  TACGTTTATTTAAATGTTCTTTAG-TGCGTTCATAAACTTCTACGGAGAT  178

seq1  ATTTTACACATGTAAGAAATAAAAGATAATGATACATTTTCAAAAGCGCC  248
      |||||||||||||||||||| ||||||||||||||| |||||||||||||
seq2  ATTTTACACATGTAAGAAAT-AAAGATAATGATACA-TTTCAAAAGCGCC  226

seq1  TTGAGTCCATCTATTGATGACGTTCAAAGGTTAAGCCAGCCTTGCATGTC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGTCCATCTATTGATGACGTTCAAAGGTTAAGCCAGCCTTGCATGTC  276

seq1  AGGAATAAGCCAACCTAAAACTAACTGTAAAGATAGCCCAGAA-TTCTAG  347
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  AGGAATAAGCCAACCTAAAACTAACTGTAAAGATAGCCCAGAATTTCTAG  326

seq1  TCAGGAACCTCTCTGCTTGGCTATCCACCCAAAGTCTGGCTTCATGGGCT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGAACCTCTCTGCTTGGCTATCCACCCAAAGTCTGGCTTCATGGGCT  376

seq1  ACTGTGGAGGCCTTAGAGTGATGGAGAAGCCTTGGGGCTTCCTCTTGGAC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTGGAGGCCTTAGAGTGATGGAGAAGCCTTGGGGCTTCCTCTTGGAC  426

seq1  CGATTGTGGTCTGGTTGCTAGGCACTCCCTTCCTGTGTGCTGTATCCTGA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGATTGTGGTCTGGTTGCTAGGCACTCCCTTCCTGTGTGCTGTATCCTGA  476

seq1  TGATGCTGTAGCTAGGCCTAGGAGATGAGGCCGTCAAGTCTCATTTTCTA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGCTGTAGCTAGGCCTAGGAGATGAGGCCGTCAAGTCTCATTTTCTA  526

seq1  TGAAACCATTGCAGGTATCTCTGACAGGGATGAAAATAGGTCACTCGCTA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAACCATTGCAGGTATCTCTGACAGGGATGAAAATAGGTCACTCGCTA  576

seq1  GACAGTAGTCCCTCCTCAGTTTTCAGATTCCTCATCAGAGAAGTTACAAT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGTAGTCCCTCCTCAGTTTTCAGATTCCTCATCAGAGAAGTTACAAT  626

seq1  TTTGTCAAAGGAAAATGATTTCAAACAAAGTACATTAAAAAAATCGAAAC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTCAAAGGAAAATGATTTCAAACAAAGTACATTAAAAAAATCGAAAC  676

seq1  ATATAAGCCAGATTTCTAAATGGAAGTCATTCTTTCTACCTAAACCGGGT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAAGCCAGATTTCTAAATGGAAGTCATTCTTTCTACCTAAACCGGGT  726

seq1  CCCAGACACCCTTCTTACCTGTGATGGAGGTCAGTATTTAAAAGATTTGG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGACACCCTTCTTACCTGTGATGGAGGTCAGTATTTAAAAGATTTGG  776

seq1  ATCTAAAGGGGATAATATCCCCACCTGTCCAATGCTGAGCACCACAGGAG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAAAGGGGATAATATCCCCACCTGTCCAATGCTGAGCACCACAGGAG  826

seq1  CATGCACTAGAGCTACTAACCTGTATGTCAACAAGACTATGCAGGGGAGG  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCACTAGAGCTACTAACCTGTATGTCAACAAGACTATGCAGGGGAGG  876

seq1  TTCCCACTTGCACTGTCAGATCGCAGGTGGGAGTAGGGGAGAGCCCCCAG  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCACTTGCACTGTCAGATCGCAGGTGGGAGTAGGGGAGAGCCCCCAG  926

seq1  ATGTCCCCATGGTGAGGAGAGGACAACCAGGCCTGCCTGGGAGAGGATTT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCCCCATGGTGAGGAGAGGACAACCAGGCCTGCCTGGGAGAGGATTT  976

seq1  AGAGAGCCACAGCCCGTGCAGGCCCAGGATCAGGGCCAGCTTCCCTCTGT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGCCACAGCCCGTGCAGGCCCAGGATCAGGGCCAGCTTCCCTCTGT  1026

seq1  CTCACTGGTTCCAGGGCCACATTCCAGAGAGATGAGAGCATTTACAGTCT  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACTGGTTCCAGGGCCACATTCCAGAGAGATGAGAGCATTTACAGTCT  1076

seq1  GTGCATATCTGTTGGAGTCCCATACATACATACATCAGCCCACCTATTTT  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCATATCTGTTGGAGTCCCATACATACATACATCAGCCCACCTATTTT  1126

seq1  TTGCTTTCAAGAATTC  1163
      ||||||||||||||||
seq2  TTGCTTTCAAGAATTC  1142

seq1: chr10_76760379_76760953
seq2: B6Ng01-096F15.g_68_642

seq1  GAATTCAACCAAACATTGAAGAAAACGTATCAACCTGAAACAAACTCTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACCAAACATTGAAGAAAACGTATCAACCTGAAACAAACTCTTC  50

seq1  CAGAAAACAGATGGGAGAGAGTTGAATATTAACTCTTTTTTTTTTTTTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAACAGATGGGAGAGAGTTGAATATTAACTCTTTTTTTTTTTTTGC  100

seq1  CTGACAAAGATACTAACTACAGTAGCCTTGCAGCACAGCGTAGAACACCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACAAAGATACTAACTACAGTAGCCTTGCAGCACAGCGTAGAACACCA  150

seq1  GCAATCCCAACACTCAGGAGGCTGAGGCAGGAGGATCGAGGCAAGAGTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATCCCAACACTCAGGAGGCTGAGGCAGGAGGATCGAGGCAAGAGTTC  200

seq1  CAGGTCAACCTGGGCTACACAGTAAGGCCTGTTAAGAAAGTAACGGGAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTCAACCTGGGCTACACAGTAAGGCCTGTTAAGAAAGTAACGGGAGG  250

seq1  AAGAGGGAGTGGTAGAGAGGGAAAGGAGAGAGAAGAGCCTTTACACACTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGGGAGTGGTAGAGAGGGAAAGGAGAGAGAAGAGCCTTTACACACTC  300

seq1  TCTAGAGCTTTTCAAAACACAGTTCTGGTCCCAGACATGACTACCTATAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGAGCTTTTCAAAACACAGTTCTGGTCCCAGACATGACTACCTATAA  350

seq1  AGAAAAAAATGGTGAGGTCAGACATTAGAAGAACGGGCACTGCTCTAAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAAAATGGTGAGGTCAGACATTAGAAGAACGGGCACTGCTCTAAAG  400

seq1  GAAAGTCTCACCGCTGTCCGCACGAACAACTGGCCCAGTGCTACCCACCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGTCTCACCGCTGTCCGCACGAACAACTGGCCCAGTGCTACCCACCC  450

seq1  GGGCAGGGTTCTTGTCAATTAGTATGCGTGCTGAGCGTACCCGGCTTCCT  500
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  GGGCAGGGTTCTTGTCAATTAGTATGCGTGCTGATCGTACCCGGCTTCCT  500

seq1  AACAGCTAAGACGGCTTCCTGACGTGTGTGAAGGAAAATGATCTTGTGCA  550
      ||| ||||||||||||||||||| ||||||||||||||||||||||||||
seq2  AACTGCTAAGACGGCTTCCTGACCTGTGTGAAGGAAAATGATCTTGTGCA  550

seq1  AGGTTGCTGCTCTGCTGGACAACTC  575
      |||||||||||||||||||||||||
seq2  AGGTTGCTGCTCTGCTGGACAACTC  575